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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 8  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0364
ILE 4790.0074
PHE 4800.0039
ILE 4810.0023
SER 4820.0067
ASP 4830.0127
ASP 4840.0157
LYS 4850.0130
ASP 4860.0154
SER 4870.0143
LEU 4880.0094
LYS 4890.0119
CYS 4900.0075
PRO 4910.0078
CYS 4920.0043
ASP 4930.0053
PRO 4940.0048
GLU 4950.0082
MET 4960.0131
VAL 4970.0168
SER 4980.0229
GLN 4990.0290
SER 5000.0351
THR 5010.0324
CYS 5020.0250
ARG 5030.0201
PHE 5040.0130
PHE 5050.0086
VAL 5060.0044
CYS 5070.0017
LYS 5080.0053
CYS 5090.0051
VAL 5100.0088
GLU 5110.0123
ARG 5120.0156
SER 20.0154
VAL 30.0156
LEU 40.0147
SER 50.0154
GLN 60.0148
SER 70.0173
PRO 80.0149
ALA 90.0118
ILE 100.0091
LEU 110.0106
SER 120.0084
ALA 130.0092
SER 140.0080
PRO 150.0114
GLY 160.0161
GLU 170.0169
LYS 180.0193
VAL 190.0174
THR 200.0191
MET 210.0167
THR 220.0179
CYS 230.0168
ARG 240.0193
ALA 250.0181
ARG 260.0209
SER 270.0208
SER 290.0196
VAL 300.0157
SER 310.0156
TYR 320.0134
MET 330.0126
HIS 340.0101
TRP 350.0102
TYR 360.0077
GLN 370.0079
GLN 380.0060
LYS 390.0051
SER 400.0034
GLY 410.0040
SER 420.0051
SER 430.0047
PRO 440.0050
LYS 450.0078
PRO 460.0090
TRP 470.0111
ILE 480.0130
HIS 490.0125
ALA 500.0135
THR 510.0158
SER 520.0182
ASN 530.0177
LEU 540.0175
ALA 550.0152
SER 560.0171
GLY 570.0177
VAL 580.0169
PRO 590.0197
ALA 600.0227
ARG 610.0211
PHE 620.0188
SER 630.0202
GLY 640.0192
SER 650.0209
GLY 660.0216
SER 670.0217
GLY 680.0218
THR 690.0214
SER 700.0218
TYR 710.0189
SER 720.0183
LEU 730.0172
THR 740.0190
ILE 750.0185
SER 760.0219
ARG 770.0186
VAL 780.0141
GLU 790.0129
ALA 800.0078
GLU 810.0105
ASP 820.0092
ALA 830.0062
ALA 840.0057
THR 850.0059
TYR 860.0085
TYR 870.0083
CYS 880.0100
GLN 890.0087
GLN 900.0093
TRP 910.0069
SER 920.0094
SER 930.0110
HIS 940.0108
PRO 950.0102
PRO 960.0077
THR 970.0097
PHE 980.0078
GLY 990.0100
SER 1000.0097
GLY 1010.0091
THR 1020.0098
LYS 1030.0071
LEU 1040.0071
GLU 1050.0040
ILE 1060.0044
LYS 1070.0035
ARG 1080.0102
ALA 1090.0164
ASP 1100.0209
ALA 1110.0213
ALA 1120.0227
PRO 1130.0188
THR 1140.0183
VAL 1150.0156
SER 1160.0115
ILE 1170.0072
PHE 1180.0027
PRO 1190.0040
PRO 1200.0092
SER 1210.0122
SER 1220.0170
GLU 1230.0208
GLN 1240.0187
LEU 1250.0194
THR 1260.0245
SER 1270.0272
GLY 1280.0266
GLY 1290.0221
ALA 1300.0168
SER 1310.0120
VAL 1320.0078
VAL 1330.0046
CYS 1340.0075
PHE 1350.0080
LEU 1360.0122
ASN 1370.0130
ASN 1380.0144
PHE 1390.0158
TYR 1400.0144
PRO 1410.0133
LYS 1420.0109
ASP 1430.0163
ILE 1440.0168
ASN 1450.0184
VAL 1460.0188
LYS 1470.0213
TRP 1480.0190
LYS 1490.0220
ILE 1500.0212
ASP 1510.0220
GLY 1520.0272
SER 1530.0277
GLU 1540.0296
ARG 1550.0275
GLN 1560.0256
ASN 1570.0256
GLY 1580.0207
VAL 1590.0152
LEU 1600.0109
ASN 1610.0087
SER 1620.0052
TRP 1630.0054
THR 1640.0048
ASP 1650.0030
GLN 1660.0046
ASP 1670.0090
SER 1680.0096
LYS 1690.0125
ASP 1700.0132
SER 1710.0088
THR 1720.0103
TYR 1730.0083
SER 1740.0084
MET 1750.0077
SER 1760.0052
SER 1770.0079
THR 1780.0085
LEU 1790.0136
THR 1800.0170
LEU 1810.0212
THR 1820.0253
LYS 1830.0228
ASP 1840.0259
GLU 1850.0248
TYR 1860.0187
GLU 1870.0186
ARG 1880.0230
HIS 1890.0206
ASN 1900.0162
SER 1910.0158
TYR 1920.0142
THR 1930.0169
CYS 1940.0164
GLU 1950.0214
ALA 1960.0211
THR 1970.0241
HIS 1980.0229
LYS 1990.0261
THR 2000.0285
SER 2010.0317
THR 2020.0364
SER 2030.0348
PRO 2040.0290
ILE 2050.0252
VAL 2060.0222
LYS 2070.0170
SER 2080.0147
PHE 2090.0106
ASN 2100.0102
ARG 2110.0087
ASN 2120.0069
GLU 2130.0033
CYS 2140.0060
GLU 10.0231
VAL 20.0184
GLN 30.0169
LEU 40.0130
VAL 50.0136
GLU 60.0112
SER 70.0114
GLY 80.0119
GLY 90.0079
GLY 100.0046
LEU 110.0010
VAL 120.0052
LYS 130.0063
PRO 140.0146
GLY 150.0195
GLY 160.0169
SER 170.0168
LEU 180.0150
LYS 190.0169
LEU 200.0135
SER 210.0150
CYS 220.0141
ALA 230.0177
ALA 240.0175
SER 250.0216
GLY 260.0225
PHE 270.0209
ILE 280.0215
PHE 290.0192
SER 300.0195
ASP 310.0168
TYR 320.0131
TYR 330.0108
MET 340.0101
TYR 350.0073
TRP 360.0073
VAL 370.0050
ARG 380.0050
GLN 390.0051
THR 400.0075
PRO 410.0081
GLU 420.0098
LYS 430.0074
ARG 440.0084
LEU 450.0062
GLU 460.0080
TRP 470.0071
VAL 480.0096
ALA 490.0112
THR 500.0106
ILE 510.0139
SER 520.0139
ASP 520.0167
GLY 530.0205
ASN 540.0217
SER 550.0199
TYR 560.0186
THR 570.0175
TYR 580.0154
TYR 590.0157
VAL 600.0152
ASP 610.0206
SER 620.0200
VAL 630.0186
LYS 640.0218
GLY 650.0247
ARG 660.0221
PHE 670.0186
THR 680.0197
ILE 690.0169
SER 700.0192
ARG 710.0200
ASP 720.0239
ASN 730.0239
ALA 740.0282
LYS 750.0263
ASN 760.0220
ASN 770.0197
LEU 780.0163
TYR 790.0165
LEU 800.0151
GLN 810.0186
MET 820.0173
SER 820.0202
SER 820.0208
LEU 820.0163
LYS 830.0171
SER 840.0143
GLU 850.0144
ASP 860.0120
THR 870.0085
ALA 880.0060
ILE 890.0029
TYR 900.0049
TYR 910.0047
CYS 920.0073
ALA 930.0064
ARG 940.0077
ASP 950.0069
GLY 960.0105
PRO 970.0143
THR 980.0148
ASP 990.0160
SER 1000.0134
SER 1000.0096
GLY 1000.0063
TYR 1000.0062
GLY 1000.0036
GLY 1000.0051
PHE 1000.0044
GLY 1010.0083
TYR 1020.0093
TRP 1030.0061
GLY 1040.0077
GLN 1050.0078
GLY 1060.0044
THR 1070.0049
LEU 1080.0025
VAL 1090.0043
THR 1100.0043
VAL 1110.0082
SER 1120.0096
GLU 1130.0119
ALA 1140.0165
LYS 1150.0209
THR 1160.0187
THR 1170.0216
PRO 1180.0223
PRO 1190.0190
SER 1200.0198
VAL 1210.0178
TYR 1220.0153
PRO 1230.0137
LEU 1240.0085
ALA 1250.0101
PRO 1260.0088
GLY 1270.0060
SER 1280.0098
ALA 1290.0158
ALA 1300.0170
GLN 1330.0209
THR 1340.0266
ASN 1350.0273
SER 1360.0309
MET 1370.0262
VAL 1380.0201
THR 1390.0145
LEU 1400.0119
GLY 1410.0096
CYS 1420.0112
LEU 1430.0092
VAL 1440.0122
LYS 1450.0141
GLY 1460.0179
TYR 1470.0171
PHE 1480.0154
PRO 1490.0117
GLU 1500.0084
PRO 1510.0097
VAL 1520.0125
THR 1530.0151
VAL 1540.0153
THR 1560.0196
TRP 1570.0211
ASN 1620.0266
SER 1630.0281
GLY 1640.0276
SER 1650.0303
LEU 1660.0259
SER 1670.0239
SER 1680.0252
GLY 1690.0203
VAL 1710.0139
HIS 1720.0096
THR 1730.0073
PHE 1740.0021
PRO 1750.0020
ALA 1760.0058
VAL 1770.0082
LEU 1780.0119
GLN 1790.0147
SER 1800.0199
ASP 1830.0178
LEU 1840.0160
TYR 1850.0126
THR 1860.0101
LEU 1870.0066
SER 1880.0052
SER 1890.0073
SER 1900.0092
VAL 1910.0148
THR 1920.0193
VAL 1930.0248
PRO 1940.0296
SER 1950.0276
SER 1960.0327
PRO 1980.0316
ARG 1990.0262
PRO 2000.0255
SER 2020.0320
GLU 2030.0331
THR 2040.0298
VAL 2050.0239
THR 2060.0234
CYS 2080.0194
ASN 2090.0221
VAL 2100.0196
ALA 2110.0200
HIS 2120.0186
PRO 2130.0211
ALA 2140.0189
SER 2150.0241
SER 2160.0258
THR 2170.0261
LYS 2180.0266
VAL 2190.0257
ASP 2200.0257
LYS 2210.0219
LYS 2220.0233
ILE 2230.0189
VAL 2260.0203
PRO 2270.0177
ARG 2280.0138
ASP 2320.0159
CYS 2330.0122

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.