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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 80  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0715
ILE 4790.0156
PHE 4800.0052
ILE 4810.0073
SER 4820.0080
ASP 4830.0047
ASP 4840.0070
LYS 4850.0069
ASP 4860.0086
SER 4870.0111
LEU 4880.0071
LYS 4890.0077
CYS 4900.0065
PRO 4910.0071
CYS 4920.0059
ASP 4930.0059
PRO 4940.0047
GLU 4950.0035
MET 4960.0051
VAL 4970.0066
SER 4980.0055
GLN 4990.0045
SER 5000.0117
THR 5010.0101
CYS 5020.0094
ARG 5030.0034
PHE 5040.0026
PHE 5050.0035
VAL 5060.0050
CYS 5070.0045
LYS 5080.0050
CYS 5090.0071
VAL 5100.0066
GLU 5110.0084
ARG 5120.0214
SER 20.0033
VAL 30.0084
LEU 40.0100
SER 50.0062
GLN 60.0058
SER 70.0089
PRO 80.0114
ALA 90.0089
ILE 100.0073
LEU 110.0120
SER 120.0112
ALA 130.0129
SER 140.0165
PRO 150.0173
GLY 160.0187
GLU 170.0168
LYS 180.0174
VAL 190.0179
THR 200.0122
MET 210.0116
THR 220.0107
CYS 230.0114
ARG 240.0107
ALA 250.0091
ARG 260.0023
SER 270.0233
SER 290.0124
VAL 300.0102
SER 310.0105
TYR 320.0079
MET 330.0085
HIS 340.0084
TRP 350.0043
TYR 360.0045
GLN 370.0043
GLN 380.0100
LYS 390.0056
SER 400.0094
GLY 410.0213
SER 420.0100
SER 430.0033
PRO 440.0026
LYS 450.0038
PRO 460.0041
TRP 470.0062
ILE 480.0045
HIS 490.0054
ALA 500.0095
THR 510.0078
SER 520.0063
ASN 530.0043
LEU 540.0046
ALA 550.0095
SER 560.0181
GLY 570.0258
VAL 580.0199
PRO 590.0287
ALA 600.0286
ARG 610.0274
PHE 620.0151
SER 630.0133
GLY 640.0116
SER 650.0096
GLY 660.0092
SER 670.0083
GLY 680.0142
THR 690.0165
SER 700.0171
TYR 710.0093
SER 720.0102
LEU 730.0108
THR 740.0210
ILE 750.0218
SER 760.0212
ARG 770.0178
VAL 780.0160
GLU 790.0174
ALA 800.0232
GLU 810.0260
ASP 820.0259
ALA 830.0132
ALA 840.0111
THR 850.0141
TYR 860.0084
TYR 870.0103
CYS 880.0125
GLN 890.0098
GLN 900.0069
TRP 910.0029
SER 920.0047
SER 930.0027
HIS 940.0047
PRO 950.0063
PRO 960.0030
THR 970.0084
PHE 980.0129
GLY 990.0165
SER 1000.0177
GLY 1010.0138
THR 1020.0114
LYS 1030.0121
LEU 1040.0131
GLU 1050.0133
ILE 1060.0135
LYS 1070.0159
ARG 1080.0193
ALA 1090.0189
ASP 1100.0171
ALA 1110.0176
ALA 1120.0140
PRO 1130.0078
THR 1140.0070
VAL 1150.0077
SER 1160.0058
ILE 1170.0066
PHE 1180.0091
PRO 1190.0165
PRO 1200.0153
SER 1210.0148
SER 1220.0165
GLU 1230.0172
GLN 1240.0180
LEU 1250.0132
THR 1260.0197
SER 1270.0278
GLY 1280.0168
GLY 1290.0177
ALA 1300.0147
SER 1310.0105
VAL 1320.0094
VAL 1330.0071
CYS 1340.0057
PHE 1350.0068
LEU 1360.0084
ASN 1370.0061
ASN 1380.0059
PHE 1390.0059
TYR 1400.0112
PRO 1410.0111
LYS 1420.0139
ASP 1430.0161
ILE 1440.0154
ASN 1450.0178
VAL 1460.0127
LYS 1470.0107
TRP 1480.0086
LYS 1490.0068
ILE 1500.0072
ASP 1510.0130
GLY 1520.0208
SER 1530.0079
GLU 1540.0249
ARG 1550.0192
GLN 1560.0102
ASN 1570.0175
GLY 1580.0123
VAL 1590.0069
LEU 1600.0037
ASN 1610.0111
SER 1620.0126
TRP 1630.0130
THR 1640.0119
ASP 1650.0149
GLN 1660.0160
ASP 1670.0224
SER 1680.0274
LYS 1690.0569
ASP 1700.0237
SER 1710.0253
THR 1720.0206
TYR 1730.0091
SER 1740.0059
MET 1750.0105
SER 1760.0101
SER 1770.0057
THR 1780.0044
LEU 1790.0102
THR 1800.0108
LEU 1810.0126
THR 1820.0092
LYS 1830.0035
ASP 1840.0099
GLU 1850.0105
TYR 1860.0113
GLU 1870.0130
ARG 1880.0165
HIS 1890.0207
ASN 1900.0226
SER 1910.0183
TYR 1920.0164
THR 1930.0142
CYS 1940.0058
GLU 1950.0086
ALA 1960.0135
THR 1970.0124
HIS 1980.0131
LYS 1990.0217
THR 2000.0207
SER 2010.0190
THR 2020.0163
SER 2030.0215
PRO 2040.0191
ILE 2050.0222
VAL 2060.0074
LYS 2070.0082
SER 2080.0121
PHE 2090.0257
ASN 2100.0231
ARG 2110.0167
ASN 2120.0311
GLU 2130.0165
CYS 2140.0149
GLU 10.0391
VAL 20.0091
GLN 30.0278
LEU 40.0114
VAL 50.0091
GLU 60.0072
SER 70.0087
GLY 80.0090
GLY 90.0088
GLY 100.0062
LEU 110.0056
VAL 120.0072
LYS 130.0134
PRO 140.0068
GLY 150.0084
GLY 160.0047
SER 170.0068
LEU 180.0078
LYS 190.0113
LEU 200.0110
SER 210.0115
CYS 220.0098
ALA 230.0124
ALA 240.0160
SER 250.0194
GLY 260.0153
PHE 270.0173
ILE 280.0201
PHE 290.0160
SER 300.0160
ASP 310.0141
TYR 320.0122
TYR 330.0090
MET 340.0053
TYR 350.0066
TRP 360.0084
VAL 370.0056
ARG 380.0060
GLN 390.0096
THR 400.0166
PRO 410.0211
GLU 420.0304
LYS 430.0217
ARG 440.0206
LEU 450.0146
GLU 460.0069
TRP 470.0026
VAL 480.0044
ALA 490.0063
THR 500.0059
ILE 510.0049
SER 520.0090
ASP 520.0088
GLY 530.0090
ASN 540.0091
SER 550.0078
TYR 560.0071
THR 570.0057
TYR 580.0056
TYR 590.0058
VAL 600.0064
ASP 610.0078
SER 620.0073
VAL 630.0060
LYS 640.0062
GLY 650.0078
ARG 660.0084
PHE 670.0071
THR 680.0070
ILE 690.0064
SER 700.0091
ARG 710.0056
ASP 720.0110
ASN 730.0122
ALA 740.0257
LYS 750.0143
ASN 760.0092
ASN 770.0096
LEU 780.0098
TYR 790.0116
LEU 800.0109
GLN 810.0117
MET 820.0085
SER 820.0064
SER 820.0049
LEU 820.0048
LYS 830.0057
SER 840.0083
GLU 850.0115
ASP 860.0078
THR 870.0112
ALA 880.0093
ILE 890.0060
TYR 900.0047
TYR 910.0034
CYS 920.0056
ALA 930.0072
ARG 940.0072
ASP 950.0059
GLY 960.0050
PRO 970.0081
THR 980.0254
ASP 990.0309
SER 1000.0051
SER 1000.0045
GLY 1000.0052
TYR 1000.0042
GLY 1000.0030
GLY 1000.0019
PHE 1000.0016
GLY 1010.0017
TYR 1020.0019
TRP 1030.0042
GLY 1040.0040
GLN 1050.0047
GLY 1060.0059
THR 1070.0050
LEU 1080.0045
VAL 1090.0072
THR 1100.0076
VAL 1110.0066
SER 1120.0055
GLU 1130.0080
ALA 1140.0081
LYS 1150.0368
THR 1160.0159
THR 1170.0104
PRO 1180.0127
PRO 1190.0099
SER 1200.0099
VAL 1210.0060
TYR 1220.0064
PRO 1230.0060
LEU 1240.0065
ALA 1250.0052
PRO 1260.0055
GLY 1270.0099
SER 1280.0355
ALA 1290.0715
ALA 1300.0247
GLN 1330.0440
THR 1340.0544
ASN 1350.0304
SER 1360.0452
MET 1370.0360
VAL 1380.0250
THR 1390.0120
LEU 1400.0129
GLY 1410.0122
CYS 1420.0030
LEU 1430.0039
VAL 1440.0027
LYS 1450.0031
GLY 1460.0043
TYR 1470.0041
PHE 1480.0031
PRO 1490.0028
GLU 1500.0028
PRO 1510.0008
VAL 1520.0037
THR 1530.0059
VAL 1540.0085
THR 1560.0100
TRP 1570.0101
ASN 1620.0098
SER 1630.0083
GLY 1640.0137
SER 1650.0117
LEU 1660.0152
SER 1670.0186
SER 1680.0312
GLY 1690.0248
VAL 1710.0132
HIS 1720.0097
THR 1730.0115
PHE 1740.0135
PRO 1750.0136
ALA 1760.0124
VAL 1770.0106
LEU 1780.0108
GLN 1790.0097
SER 1800.0142
ASP 1830.0103
LEU 1840.0062
TYR 1850.0038
THR 1860.0067
LEU 1870.0084
SER 1880.0094
SER 1890.0150
SER 1900.0153
VAL 1910.0177
THR 1920.0316
VAL 1930.0316
PRO 1940.0252
SER 1950.0205
SER 1960.0564
PRO 1980.0453
ARG 1990.0338
PRO 2000.0234
SER 2020.0340
GLU 2030.0381
THR 2040.0282
VAL 2050.0106
THR 2060.0090
CYS 2080.0077
ASN 2090.0081
VAL 2100.0087
ALA 2110.0089
HIS 2120.0076
PRO 2130.0093
ALA 2140.0069
SER 2150.0124
SER 2160.0206
THR 2170.0148
LYS 2180.0119
VAL 2190.0090
ASP 2200.0102
LYS 2210.0093
LYS 2220.0087
ILE 2230.0060
VAL 2260.0044
PRO 2270.0078
ARG 2280.0089
ASP 2320.0414
CYS 2330.0378

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.