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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 81  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0726
ILE 4790.0316
PHE 4800.0333
ILE 4810.0141
SER 4820.0099
ASP 4830.0094
ASP 4840.0092
LYS 4850.0034
ASP 4860.0049
SER 4870.0028
LEU 4880.0080
LYS 4890.0075
CYS 4900.0059
PRO 4910.0100
CYS 4920.0068
ASP 4930.0029
PRO 4940.0059
GLU 4950.0082
MET 4960.0082
VAL 4970.0124
SER 4980.0074
GLN 4990.0080
SER 5000.0160
THR 5010.0134
CYS 5020.0140
ARG 5030.0029
PHE 5040.0076
PHE 5050.0082
VAL 5060.0079
CYS 5070.0072
LYS 5080.0048
CYS 5090.0085
VAL 5100.0112
GLU 5110.0167
ARG 5120.0198
SER 20.0167
VAL 30.0179
LEU 40.0169
SER 50.0142
GLN 60.0132
SER 70.0147
PRO 80.0124
ALA 90.0124
ILE 100.0123
LEU 110.0112
SER 120.0105
ALA 130.0089
SER 140.0086
PRO 150.0053
GLY 160.0154
GLU 170.0202
LYS 180.0179
VAL 190.0210
THR 200.0141
MET 210.0133
THR 220.0132
CYS 230.0185
ARG 240.0185
ALA 250.0216
ARG 260.0304
SER 270.0269
SER 290.0160
VAL 300.0162
SER 310.0166
TYR 320.0050
MET 330.0044
HIS 340.0046
TRP 350.0015
TYR 360.0026
GLN 370.0039
GLN 380.0056
LYS 390.0038
SER 400.0012
GLY 410.0054
SER 420.0023
SER 430.0031
PRO 440.0052
LYS 450.0054
PRO 460.0069
TRP 470.0060
ILE 480.0047
HIS 490.0056
ALA 500.0025
THR 510.0031
SER 520.0028
ASN 530.0089
LEU 540.0097
ALA 550.0137
SER 560.0283
GLY 570.0216
VAL 580.0141
PRO 590.0164
ALA 600.0159
ARG 610.0138
PHE 620.0051
SER 630.0061
GLY 640.0079
SER 650.0167
GLY 660.0154
SER 670.0168
GLY 680.0226
THR 690.0208
SER 700.0197
TYR 710.0115
SER 720.0113
LEU 730.0124
THR 740.0142
ILE 750.0126
SER 760.0132
ARG 770.0137
VAL 780.0127
GLU 790.0099
ALA 800.0219
GLU 810.0249
ASP 820.0255
ALA 830.0150
ALA 840.0085
THR 850.0082
TYR 860.0028
TYR 870.0050
CYS 880.0070
GLN 890.0084
GLN 900.0091
TRP 910.0090
SER 920.0105
SER 930.0110
HIS 940.0118
PRO 950.0116
PRO 960.0119
THR 970.0121
PHE 980.0083
GLY 990.0092
SER 1000.0096
GLY 1010.0078
THR 1020.0072
LYS 1030.0087
LEU 1040.0122
GLU 1050.0092
ILE 1060.0096
LYS 1070.0048
ARG 1080.0073
ALA 1090.0131
ASP 1100.0130
ALA 1110.0089
ALA 1120.0115
PRO 1130.0090
THR 1140.0093
VAL 1150.0119
SER 1160.0103
ILE 1170.0096
PHE 1180.0104
PRO 1190.0102
PRO 1200.0093
SER 1210.0073
SER 1220.0092
GLU 1230.0063
GLN 1240.0049
LEU 1250.0115
THR 1260.0107
SER 1270.0111
GLY 1280.0122
GLY 1290.0120
ALA 1300.0126
SER 1310.0071
VAL 1320.0064
VAL 1330.0068
CYS 1340.0096
PHE 1350.0094
LEU 1360.0109
ASN 1370.0115
ASN 1380.0080
PHE 1390.0079
TYR 1400.0109
PRO 1410.0146
LYS 1420.0164
ASP 1430.0164
ILE 1440.0144
ASN 1450.0169
VAL 1460.0064
LYS 1470.0027
TRP 1480.0049
LYS 1490.0126
ILE 1500.0112
ASP 1510.0127
GLY 1520.0187
SER 1530.0187
GLU 1540.0257
ARG 1550.0186
GLN 1560.0101
ASN 1570.0104
GLY 1580.0045
VAL 1590.0059
LEU 1600.0124
ASN 1610.0177
SER 1620.0191
TRP 1630.0171
THR 1640.0088
ASP 1650.0095
GLN 1660.0108
ASP 1670.0150
SER 1680.0334
LYS 1690.0451
ASP 1700.0221
SER 1710.0178
THR 1720.0117
TYR 1730.0068
SER 1740.0082
MET 1750.0128
SER 1760.0141
SER 1770.0103
THR 1780.0084
LEU 1790.0060
THR 1800.0047
LEU 1810.0077
THR 1820.0101
LYS 1830.0124
ASP 1840.0139
GLU 1850.0103
TYR 1860.0129
GLU 1870.0185
ARG 1880.0194
HIS 1890.0162
ASN 1900.0189
SER 1910.0068
TYR 1920.0093
THR 1930.0103
CYS 1940.0065
GLU 1950.0033
ALA 1960.0076
THR 1970.0164
HIS 1980.0163
LYS 1990.0165
THR 2000.0189
SER 2010.0185
THR 2020.0251
SER 2030.0207
PRO 2040.0150
ILE 2050.0125
VAL 2060.0120
LYS 2070.0125
SER 2080.0103
PHE 2090.0131
ASN 2100.0131
ARG 2110.0211
ASN 2120.0377
GLU 2130.0302
CYS 2140.0347
GLU 10.0239
VAL 20.0086
GLN 30.0106
LEU 40.0035
VAL 50.0042
GLU 60.0040
SER 70.0062
GLY 80.0106
GLY 90.0107
GLY 100.0163
LEU 110.0132
VAL 120.0129
LYS 130.0171
PRO 140.0138
GLY 150.0183
GLY 160.0049
SER 170.0036
LEU 180.0079
LYS 190.0074
LEU 200.0045
SER 210.0058
CYS 220.0078
ALA 230.0074
ALA 240.0071
SER 250.0058
GLY 260.0068
PHE 270.0085
ILE 280.0177
PHE 290.0102
SER 300.0127
ASP 310.0110
TYR 320.0073
TYR 330.0036
MET 340.0062
TYR 350.0071
TRP 360.0072
VAL 370.0071
ARG 380.0057
GLN 390.0032
THR 400.0090
PRO 410.0051
GLU 420.0120
LYS 430.0063
ARG 440.0054
LEU 450.0048
GLU 460.0026
TRP 470.0049
VAL 480.0053
ALA 490.0082
THR 500.0081
ILE 510.0082
SER 520.0042
ASP 520.0082
GLY 530.0149
ASN 540.0183
SER 550.0135
TYR 560.0138
THR 570.0133
TYR 580.0086
TYR 590.0046
VAL 600.0013
ASP 610.0241
SER 620.0192
VAL 630.0108
LYS 640.0145
GLY 650.0139
ARG 660.0104
PHE 670.0066
THR 680.0084
ILE 690.0090
SER 700.0054
ARG 710.0024
ASP 720.0097
ASN 730.0150
ALA 740.0273
LYS 750.0217
ASN 760.0048
ASN 770.0083
LEU 780.0087
TYR 790.0065
LEU 800.0056
GLN 810.0061
MET 820.0051
SER 820.0022
SER 820.0039
LEU 820.0054
LYS 830.0088
SER 840.0108
GLU 850.0128
ASP 860.0122
THR 870.0129
ALA 880.0081
ILE 890.0064
TYR 900.0058
TYR 910.0043
CYS 920.0052
ALA 930.0055
ARG 940.0044
ASP 950.0063
GLY 960.0090
PRO 970.0119
THR 980.0155
ASP 990.0204
SER 1000.0071
SER 1000.0055
GLY 1000.0053
TYR 1000.0072
GLY 1000.0072
GLY 1000.0067
PHE 1000.0051
GLY 1010.0045
TYR 1020.0030
TRP 1030.0044
GLY 1040.0035
GLN 1050.0028
GLY 1060.0034
THR 1070.0068
LEU 1080.0102
VAL 1090.0132
THR 1100.0123
VAL 1110.0077
SER 1120.0182
GLU 1130.0162
ALA 1140.0223
LYS 1150.0361
THR 1160.0062
THR 1170.0077
PRO 1180.0105
PRO 1190.0110
SER 1200.0122
VAL 1210.0067
TYR 1220.0103
PRO 1230.0159
LEU 1240.0129
ALA 1250.0127
PRO 1260.0131
GLY 1270.0151
SER 1280.0155
ALA 1290.0237
ALA 1300.0145
GLN 1330.0483
THR 1340.0231
ASN 1350.0726
SER 1360.0369
MET 1370.0257
VAL 1380.0324
THR 1390.0017
LEU 1400.0085
GLY 1410.0122
CYS 1420.0167
LEU 1430.0136
VAL 1440.0105
LYS 1450.0152
GLY 1460.0129
TYR 1470.0108
PHE 1480.0087
PRO 1490.0111
GLU 1500.0171
PRO 1510.0155
VAL 1520.0027
THR 1530.0138
VAL 1540.0200
THR 1560.0237
TRP 1570.0185
ASN 1620.0235
SER 1630.0254
GLY 1640.0160
SER 1650.0200
LEU 1660.0082
SER 1670.0136
SER 1680.0215
GLY 1690.0150
VAL 1710.0061
HIS 1720.0068
THR 1730.0094
PHE 1740.0152
PRO 1750.0175
ALA 1760.0212
VAL 1770.0358
LEU 1780.0267
GLN 1790.0416
SER 1800.0164
ASP 1830.0293
LEU 1840.0148
TYR 1850.0179
THR 1860.0198
LEU 1870.0139
SER 1880.0117
SER 1890.0118
SER 1900.0083
VAL 1910.0039
THR 1920.0174
VAL 1930.0136
PRO 1940.0140
SER 1950.0113
SER 1960.0165
PRO 1980.0136
ARG 1990.0137
PRO 2000.0120
SER 2020.0226
GLU 2030.0163
THR 2040.0180
VAL 2050.0208
THR 2060.0278
CYS 2080.0312
ASN 2090.0310
VAL 2100.0294
ALA 2110.0202
HIS 2120.0046
PRO 2130.0177
ALA 2140.0270
SER 2150.0276
SER 2160.0259
THR 2170.0191
LYS 2180.0384
VAL 2190.0316
ASP 2200.0244
LYS 2210.0189
LYS 2220.0189
ILE 2230.0188
VAL 2260.0118
PRO 2270.0200
ARG 2280.0208
ASP 2320.0376
CYS 2330.0412

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.