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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 82  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0500
ILE 4790.0467
PHE 4800.0399
ILE 4810.0051
SER 4820.0090
ASP 4830.0047
ASP 4840.0070
LYS 4850.0033
ASP 4860.0095
SER 4870.0140
LEU 4880.0098
LYS 4890.0171
CYS 4900.0131
PRO 4910.0138
CYS 4920.0115
ASP 4930.0071
PRO 4940.0038
GLU 4950.0029
MET 4960.0023
VAL 4970.0064
SER 4980.0029
GLN 4990.0019
SER 5000.0074
THR 5010.0041
CYS 5020.0050
ARG 5030.0032
PHE 5040.0058
PHE 5050.0054
VAL 5060.0066
CYS 5070.0068
LYS 5080.0075
CYS 5090.0089
VAL 5100.0108
GLU 5110.0161
ARG 5120.0124
SER 20.0322
VAL 30.0388
LEU 40.0309
SER 50.0156
GLN 60.0088
SER 70.0065
PRO 80.0228
ALA 90.0218
ILE 100.0214
LEU 110.0136
SER 120.0057
ALA 130.0059
SER 140.0137
PRO 150.0155
GLY 160.0218
GLU 170.0156
LYS 180.0167
VAL 190.0145
THR 200.0116
MET 210.0073
THR 220.0033
CYS 230.0177
ARG 240.0214
ALA 250.0235
ARG 260.0389
SER 270.0381
SER 290.0180
VAL 300.0193
SER 310.0191
TYR 320.0111
MET 330.0096
HIS 340.0070
TRP 350.0046
TYR 360.0044
GLN 370.0031
GLN 380.0088
LYS 390.0095
SER 400.0115
GLY 410.0071
SER 420.0076
SER 430.0121
PRO 440.0094
LYS 450.0080
PRO 460.0118
TRP 470.0068
ILE 480.0086
HIS 490.0136
ALA 500.0138
THR 510.0131
SER 520.0124
ASN 530.0179
LEU 540.0135
ALA 550.0194
SER 560.0382
GLY 570.0331
VAL 580.0161
PRO 590.0151
ALA 600.0152
ARG 610.0142
PHE 620.0065
SER 630.0053
GLY 640.0081
SER 650.0178
GLY 660.0177
SER 670.0279
GLY 680.0251
THR 690.0250
SER 700.0231
TYR 710.0133
SER 720.0061
LEU 730.0047
THR 740.0141
ILE 750.0116
SER 760.0122
ARG 770.0204
VAL 780.0088
GLU 790.0032
ALA 800.0098
GLU 810.0130
ASP 820.0129
ALA 830.0103
ALA 840.0099
THR 850.0099
TYR 860.0071
TYR 870.0071
CYS 880.0089
GLN 890.0071
GLN 900.0089
TRP 910.0079
SER 920.0124
SER 930.0119
HIS 940.0126
PRO 950.0120
PRO 960.0126
THR 970.0135
PHE 980.0096
GLY 990.0128
SER 1000.0087
GLY 1010.0086
THR 1020.0100
LYS 1030.0106
LEU 1040.0074
GLU 1050.0062
ILE 1060.0053
LYS 1070.0096
ARG 1080.0102
ALA 1090.0117
ASP 1100.0087
ALA 1110.0089
ALA 1120.0089
PRO 1130.0075
THR 1140.0079
VAL 1150.0095
SER 1160.0060
ILE 1170.0041
PHE 1180.0054
PRO 1190.0088
PRO 1200.0088
SER 1210.0100
SER 1220.0092
GLU 1230.0088
GLN 1240.0108
LEU 1250.0063
THR 1260.0081
SER 1270.0175
GLY 1280.0122
GLY 1290.0128
ALA 1300.0101
SER 1310.0046
VAL 1320.0030
VAL 1330.0016
CYS 1340.0060
PHE 1350.0060
LEU 1360.0081
ASN 1370.0085
ASN 1380.0060
PHE 1390.0049
TYR 1400.0081
PRO 1410.0095
LYS 1420.0111
ASP 1430.0121
ILE 1440.0094
ASN 1450.0114
VAL 1460.0061
LYS 1470.0044
TRP 1480.0050
LYS 1490.0033
ILE 1500.0033
ASP 1510.0034
GLY 1520.0067
SER 1530.0078
GLU 1540.0095
ARG 1550.0021
GLN 1560.0071
ASN 1570.0128
GLY 1580.0123
VAL 1590.0132
LEU 1600.0148
ASN 1610.0119
SER 1620.0093
TRP 1630.0086
THR 1640.0071
ASP 1650.0051
GLN 1660.0057
ASP 1670.0106
SER 1680.0130
LYS 1690.0231
ASP 1700.0078
SER 1710.0054
THR 1720.0065
TYR 1730.0061
SER 1740.0078
MET 1750.0097
SER 1760.0095
SER 1770.0104
THR 1780.0094
LEU 1790.0072
THR 1800.0048
LEU 1810.0048
THR 1820.0104
LYS 1830.0060
ASP 1840.0041
GLU 1850.0047
TYR 1860.0048
GLU 1870.0043
ARG 1880.0057
HIS 1890.0061
ASN 1900.0059
SER 1910.0018
TYR 1920.0032
THR 1930.0041
CYS 1940.0065
GLU 1950.0055
ALA 1960.0072
THR 1970.0085
HIS 1980.0074
LYS 1990.0057
THR 2000.0104
SER 2010.0110
THR 2020.0243
SER 2030.0270
PRO 2040.0189
ILE 2050.0223
VAL 2060.0128
LYS 2070.0111
SER 2080.0067
PHE 2090.0075
ASN 2100.0067
ARG 2110.0071
ASN 2120.0094
GLU 2130.0112
CYS 2140.0133
GLU 10.0365
VAL 20.0310
GLN 30.0204
LEU 40.0187
VAL 50.0133
GLU 60.0136
SER 70.0107
GLY 80.0156
GLY 90.0115
GLY 100.0065
LEU 110.0061
VAL 120.0098
LYS 130.0133
PRO 140.0224
GLY 150.0218
GLY 160.0121
SER 170.0117
LEU 180.0137
LYS 190.0165
LEU 200.0121
SER 210.0107
CYS 220.0140
ALA 230.0130
ALA 240.0182
SER 250.0300
GLY 260.0303
PHE 270.0331
ILE 280.0246
PHE 290.0167
SER 300.0114
ASP 310.0145
TYR 320.0143
TYR 330.0147
MET 340.0120
TYR 350.0116
TRP 360.0097
VAL 370.0081
ARG 380.0083
GLN 390.0083
THR 400.0112
PRO 410.0100
GLU 420.0119
LYS 430.0103
ARG 440.0123
LEU 450.0110
GLU 460.0036
TRP 470.0037
VAL 480.0043
ALA 490.0085
THR 500.0116
ILE 510.0126
SER 520.0175
ASP 520.0045
GLY 530.0205
ASN 540.0331
SER 550.0258
TYR 560.0277
THR 570.0239
TYR 580.0123
TYR 590.0107
VAL 600.0158
ASP 610.0364
SER 620.0338
VAL 630.0185
LYS 640.0176
GLY 650.0158
ARG 660.0124
PHE 670.0078
THR 680.0078
ILE 690.0108
SER 700.0149
ARG 710.0119
ASP 720.0106
ASN 730.0071
ALA 740.0071
LYS 750.0119
ASN 760.0101
ASN 770.0094
LEU 780.0110
TYR 790.0122
LEU 800.0118
GLN 810.0117
MET 820.0135
SER 820.0119
SER 820.0135
LEU 820.0103
LYS 830.0118
SER 840.0084
GLU 850.0054
ASP 860.0083
THR 870.0075
ALA 880.0074
ILE 890.0087
TYR 900.0087
TYR 910.0120
CYS 920.0141
ALA 930.0158
ARG 940.0223
ASP 950.0231
GLY 960.0266
PRO 970.0307
THR 980.0306
ASP 990.0361
SER 1000.0171
SER 1000.0134
GLY 1000.0097
TYR 1000.0118
GLY 1000.0126
GLY 1000.0155
PHE 1000.0163
GLY 1010.0176
TYR 1020.0186
TRP 1030.0154
GLY 1040.0145
GLN 1050.0116
GLY 1060.0093
THR 1070.0084
LEU 1080.0079
VAL 1090.0084
THR 1100.0065
VAL 1110.0102
SER 1120.0211
GLU 1130.0248
ALA 1140.0188
LYS 1150.0221
THR 1160.0107
THR 1170.0065
PRO 1180.0108
PRO 1190.0092
SER 1200.0102
VAL 1210.0122
TYR 1220.0142
PRO 1230.0171
LEU 1240.0126
ALA 1250.0121
PRO 1260.0109
GLY 1270.0155
SER 1280.0136
ALA 1290.0164
ALA 1300.0311
GLN 1330.0424
THR 1340.0152
ASN 1350.0500
SER 1360.0113
MET 1370.0135
VAL 1380.0279
THR 1390.0063
LEU 1400.0034
GLY 1410.0068
CYS 1420.0093
LEU 1430.0102
VAL 1440.0081
LYS 1450.0065
GLY 1460.0065
TYR 1470.0061
PHE 1480.0022
PRO 1490.0061
GLU 1500.0076
PRO 1510.0044
VAL 1520.0074
THR 1530.0115
VAL 1540.0071
THR 1560.0040
TRP 1570.0099
ASN 1620.0344
SER 1630.0282
GLY 1640.0180
SER 1650.0261
LEU 1660.0223
SER 1670.0134
SER 1680.0341
GLY 1690.0193
VAL 1710.0033
HIS 1720.0040
THR 1730.0063
PHE 1740.0048
PRO 1750.0044
ALA 1760.0042
VAL 1770.0036
LEU 1780.0112
GLN 1790.0223
SER 1800.0262
ASP 1830.0142
LEU 1840.0068
TYR 1850.0012
THR 1860.0065
LEU 1870.0068
SER 1880.0073
SER 1890.0052
SER 1900.0047
VAL 1910.0042
THR 1920.0214
VAL 1930.0204
PRO 1940.0184
SER 1950.0193
SER 1960.0331
PRO 1980.0302
ARG 1990.0256
PRO 2000.0162
SER 2020.0298
GLU 2030.0121
THR 2040.0176
VAL 2050.0213
THR 2060.0228
CYS 2080.0137
ASN 2090.0083
VAL 2100.0068
ALA 2110.0135
HIS 2120.0104
PRO 2130.0109
ALA 2140.0149
SER 2150.0194
SER 2160.0216
THR 2170.0108
LYS 2180.0207
VAL 2190.0267
ASP 2200.0173
LYS 2210.0177
LYS 2220.0191
ILE 2230.0160
VAL 2260.0164
PRO 2270.0204
ARG 2280.0163
ASP 2320.0254
CYS 2330.0225

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.