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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 83  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0589
ILE 4790.0135
PHE 4800.0068
ILE 4810.0128
SER 4820.0107
ASP 4830.0078
ASP 4840.0100
LYS 4850.0082
ASP 4860.0114
SER 4870.0158
LEU 4880.0089
LYS 4890.0085
CYS 4900.0079
PRO 4910.0066
CYS 4920.0046
ASP 4930.0041
PRO 4940.0043
GLU 4950.0042
MET 4960.0046
VAL 4970.0082
SER 4980.0057
GLN 4990.0044
SER 5000.0135
THR 5010.0050
CYS 5020.0065
ARG 5030.0050
PHE 5040.0056
PHE 5050.0057
VAL 5060.0067
CYS 5070.0075
LYS 5080.0104
CYS 5090.0138
VAL 5100.0123
GLU 5110.0142
ARG 5120.0206
SER 20.0022
VAL 30.0030
LEU 40.0052
SER 50.0078
GLN 60.0095
SER 70.0123
PRO 80.0101
ALA 90.0113
ILE 100.0093
LEU 110.0138
SER 120.0147
ALA 130.0155
SER 140.0230
PRO 150.0185
GLY 160.0259
GLU 170.0266
LYS 180.0282
VAL 190.0315
THR 200.0154
MET 210.0112
THR 220.0111
CYS 230.0118
ARG 240.0109
ALA 250.0078
ARG 260.0085
SER 270.0117
SER 290.0067
VAL 300.0047
SER 310.0105
TYR 320.0116
MET 330.0111
HIS 340.0122
TRP 350.0081
TYR 360.0097
GLN 370.0107
GLN 380.0129
LYS 390.0135
SER 400.0159
GLY 410.0214
SER 420.0160
SER 430.0158
PRO 440.0154
LYS 450.0140
PRO 460.0127
TRP 470.0115
ILE 480.0114
HIS 490.0110
ALA 500.0129
THR 510.0126
SER 520.0129
ASN 530.0120
LEU 540.0117
ALA 550.0109
SER 560.0344
GLY 570.0282
VAL 580.0173
PRO 590.0213
ALA 600.0229
ARG 610.0155
PHE 620.0132
SER 630.0088
GLY 640.0057
SER 650.0138
GLY 660.0137
SER 670.0175
GLY 680.0125
THR 690.0128
SER 700.0156
TYR 710.0075
SER 720.0053
LEU 730.0059
THR 740.0192
ILE 750.0181
SER 760.0202
ARG 770.0219
VAL 780.0153
GLU 790.0064
ALA 800.0083
GLU 810.0134
ASP 820.0129
ALA 830.0084
ALA 840.0048
THR 850.0060
TYR 860.0061
TYR 870.0071
CYS 880.0069
GLN 890.0084
GLN 900.0088
TRP 910.0107
SER 920.0103
SER 930.0102
HIS 940.0136
PRO 950.0124
PRO 960.0100
THR 970.0055
PHE 980.0057
GLY 990.0060
SER 1000.0083
GLY 1010.0079
THR 1020.0054
LYS 1030.0045
LEU 1040.0070
GLU 1050.0082
ILE 1060.0090
LYS 1070.0134
ARG 1080.0110
ALA 1090.0111
ASP 1100.0111
ALA 1110.0104
ALA 1120.0089
PRO 1130.0103
THR 1140.0113
VAL 1150.0114
SER 1160.0048
ILE 1170.0028
PHE 1180.0036
PRO 1190.0085
PRO 1200.0094
SER 1210.0088
SER 1220.0199
GLU 1230.0150
GLN 1240.0075
LEU 1250.0069
THR 1260.0142
SER 1270.0129
GLY 1280.0072
GLY 1290.0083
ALA 1300.0102
SER 1310.0084
VAL 1320.0068
VAL 1330.0049
CYS 1340.0066
PHE 1350.0060
LEU 1360.0084
ASN 1370.0122
ASN 1380.0121
PHE 1390.0111
TYR 1400.0091
PRO 1410.0101
LYS 1420.0115
ASP 1430.0062
ILE 1440.0052
ASN 1450.0050
VAL 1460.0104
LYS 1470.0086
TRP 1480.0073
LYS 1490.0171
ILE 1500.0180
ASP 1510.0201
GLY 1520.0225
SER 1530.0219
GLU 1540.0242
ARG 1550.0222
GLN 1560.0283
ASN 1570.0345
GLY 1580.0076
VAL 1590.0073
LEU 1600.0192
ASN 1610.0154
SER 1620.0138
TRP 1630.0144
THR 1640.0137
ASP 1650.0128
GLN 1660.0112
ASP 1670.0116
SER 1680.0170
LYS 1690.0215
ASP 1700.0152
SER 1710.0139
THR 1720.0131
TYR 1730.0115
SER 1740.0119
MET 1750.0121
SER 1760.0094
SER 1770.0092
THR 1780.0090
LEU 1790.0100
THR 1800.0109
LEU 1810.0123
THR 1820.0139
LYS 1830.0081
ASP 1840.0064
GLU 1850.0042
TYR 1860.0020
GLU 1870.0047
ARG 1880.0081
HIS 1890.0128
ASN 1900.0186
SER 1910.0142
TYR 1920.0125
THR 1930.0114
CYS 1940.0038
GLU 1950.0029
ALA 1960.0037
THR 1970.0021
HIS 1980.0046
LYS 1990.0082
THR 2000.0119
SER 2010.0075
THR 2020.0088
SER 2030.0237
PRO 2040.0134
ILE 2050.0163
VAL 2060.0091
LYS 2070.0078
SER 2080.0052
PHE 2090.0113
ASN 2100.0159
ARG 2110.0179
ASN 2120.0203
GLU 2130.0171
CYS 2140.0267
GLU 10.0258
VAL 20.0242
GLN 30.0351
LEU 40.0175
VAL 50.0130
GLU 60.0106
SER 70.0112
GLY 80.0163
GLY 90.0221
GLY 100.0258
LEU 110.0209
VAL 120.0179
LYS 130.0091
PRO 140.0029
GLY 150.0111
GLY 160.0162
SER 170.0128
LEU 180.0195
LYS 190.0110
LEU 200.0105
SER 210.0081
CYS 220.0103
ALA 230.0143
ALA 240.0244
SER 250.0300
GLY 260.0325
PHE 270.0338
ILE 280.0291
PHE 290.0240
SER 300.0256
ASP 310.0167
TYR 320.0151
TYR 330.0137
MET 340.0061
TYR 350.0036
TRP 360.0041
VAL 370.0117
ARG 380.0098
GLN 390.0095
THR 400.0065
PRO 410.0100
GLU 420.0169
LYS 430.0143
ARG 440.0048
LEU 450.0066
GLU 460.0056
TRP 470.0084
VAL 480.0099
ALA 490.0072
THR 500.0065
ILE 510.0063
SER 520.0152
ASP 520.0133
GLY 530.0128
ASN 540.0135
SER 550.0175
TYR 560.0134
THR 570.0118
TYR 580.0163
TYR 590.0171
VAL 600.0171
ASP 610.0487
SER 620.0397
VAL 630.0201
LYS 640.0258
GLY 650.0170
ARG 660.0116
PHE 670.0092
THR 680.0086
ILE 690.0077
SER 700.0133
ARG 710.0098
ASP 720.0147
ASN 730.0148
ALA 740.0224
LYS 750.0279
ASN 760.0126
ASN 770.0088
LEU 780.0081
TYR 790.0087
LEU 800.0080
GLN 810.0067
MET 820.0062
SER 820.0094
SER 820.0165
LEU 820.0081
LYS 830.0157
SER 840.0149
GLU 850.0183
ASP 860.0141
THR 870.0169
ALA 880.0134
ILE 890.0129
TYR 900.0107
TYR 910.0105
CYS 920.0110
ALA 930.0120
ARG 940.0135
ASP 950.0128
GLY 960.0112
PRO 970.0227
THR 980.0255
ASP 990.0320
SER 1000.0132
SER 1000.0118
GLY 1000.0114
TYR 1000.0110
GLY 1000.0102
GLY 1000.0100
PHE 1000.0104
GLY 1010.0114
TYR 1020.0127
TRP 1030.0104
GLY 1040.0082
GLN 1050.0062
GLY 1060.0112
THR 1070.0116
LEU 1080.0159
VAL 1090.0198
THR 1100.0193
VAL 1110.0139
SER 1120.0185
GLU 1130.0175
ALA 1140.0055
LYS 1150.0567
THR 1160.0220
THR 1170.0212
PRO 1180.0173
PRO 1190.0147
SER 1200.0127
VAL 1210.0091
TYR 1220.0116
PRO 1230.0145
LEU 1240.0078
ALA 1250.0089
PRO 1260.0101
GLY 1270.0072
SER 1280.0129
ALA 1290.0136
ALA 1300.0136
GLN 1330.0314
THR 1340.0291
ASN 1350.0200
SER 1360.0126
MET 1370.0131
VAL 1380.0143
THR 1390.0048
LEU 1400.0047
GLY 1410.0051
CYS 1420.0066
LEU 1430.0077
VAL 1440.0094
LYS 1450.0098
GLY 1460.0124
TYR 1470.0142
PHE 1480.0095
PRO 1490.0095
GLU 1500.0091
PRO 1510.0174
VAL 1520.0131
THR 1530.0167
VAL 1540.0096
THR 1560.0059
TRP 1570.0059
ASN 1620.0082
SER 1630.0099
GLY 1640.0108
SER 1650.0114
LEU 1660.0087
SER 1670.0218
SER 1680.0304
GLY 1690.0139
VAL 1710.0057
HIS 1720.0018
THR 1730.0052
PHE 1740.0060
PRO 1750.0125
ALA 1760.0099
VAL 1770.0290
LEU 1780.0306
GLN 1790.0589
SER 1800.0374
ASP 1830.0126
LEU 1840.0102
TYR 1850.0044
THR 1860.0113
LEU 1870.0080
SER 1880.0086
SER 1890.0061
SER 1900.0045
VAL 1910.0045
THR 1920.0097
VAL 1930.0095
PRO 1940.0096
SER 1950.0095
SER 1960.0202
PRO 1980.0113
ARG 1990.0098
PRO 2000.0058
SER 2020.0122
GLU 2030.0158
THR 2040.0155
VAL 2050.0105
THR 2060.0089
CYS 2080.0025
ASN 2090.0075
VAL 2100.0103
ALA 2110.0161
HIS 2120.0131
PRO 2130.0159
ALA 2140.0199
SER 2150.0197
SER 2160.0238
THR 2170.0038
LYS 2180.0280
VAL 2190.0287
ASP 2200.0156
LYS 2210.0151
LYS 2220.0172
ILE 2230.0132
VAL 2260.0173
PRO 2270.0173
ARG 2280.0157
ASP 2320.0194
CYS 2330.0131

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.