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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 84  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1063
ILE 4790.0501
PHE 4800.0392
ILE 4810.0286
SER 4820.0212
ASP 4830.0230
ASP 4840.0217
LYS 4850.0112
ASP 4860.0118
SER 4870.0121
LEU 4880.0117
LYS 4890.0140
CYS 4900.0149
PRO 4910.0139
CYS 4920.0122
ASP 4930.0093
PRO 4940.0083
GLU 4950.0049
MET 4960.0047
VAL 4970.0220
SER 4980.0158
GLN 4990.0121
SER 5000.0298
THR 5010.0109
CYS 5020.0146
ARG 5030.0194
PHE 5040.0197
PHE 5050.0176
VAL 5060.0143
CYS 5070.0158
LYS 5080.0158
CYS 5090.0218
VAL 5100.0172
GLU 5110.0132
ARG 5120.0332
SER 20.0139
VAL 30.0166
LEU 40.0192
SER 50.0208
GLN 60.0180
SER 70.0220
PRO 80.0289
ALA 90.0293
ILE 100.0257
LEU 110.0115
SER 120.0134
ALA 130.0159
SER 140.0213
PRO 150.0278
GLY 160.0353
GLU 170.0294
LYS 180.0286
VAL 190.0226
THR 200.0134
MET 210.0114
THR 220.0108
CYS 230.0170
ARG 240.0237
ALA 250.0299
ARG 260.0263
SER 270.0381
SER 290.0210
VAL 300.0195
SER 310.0172
TYR 320.0063
MET 330.0056
HIS 340.0045
TRP 350.0101
TYR 360.0112
GLN 370.0146
GLN 380.0180
LYS 390.0289
SER 400.0384
GLY 410.0501
SER 420.0360
SER 430.0223
PRO 440.0136
LYS 450.0155
PRO 460.0148
TRP 470.0202
ILE 480.0195
HIS 490.0158
ALA 500.0125
THR 510.0099
SER 520.0158
ASN 530.0236
LEU 540.0248
ALA 550.0325
SER 560.1063
GLY 570.0847
VAL 580.0342
PRO 590.0156
ALA 600.0181
ARG 610.0223
PHE 620.0143
SER 630.0120
GLY 640.0116
SER 650.0074
GLY 660.0040
SER 670.0050
GLY 680.0148
THR 690.0219
SER 700.0169
TYR 710.0042
SER 720.0042
LEU 730.0099
THR 740.0222
ILE 750.0199
SER 760.0240
ARG 770.0325
VAL 780.0229
GLU 790.0184
ALA 800.0094
GLU 810.0118
ASP 820.0184
ALA 830.0197
ALA 840.0181
THR 850.0126
TYR 860.0075
TYR 870.0020
CYS 880.0052
GLN 890.0033
GLN 900.0070
TRP 910.0103
SER 920.0160
SER 930.0123
HIS 940.0102
PRO 950.0110
PRO 960.0106
THR 970.0106
PHE 980.0105
GLY 990.0129
SER 1000.0140
GLY 1010.0110
THR 1020.0091
LYS 1030.0070
LEU 1040.0061
GLU 1050.0040
ILE 1060.0087
LYS 1070.0166
ARG 1080.0126
ALA 1090.0124
ASP 1100.0041
ALA 1110.0021
ALA 1120.0041
PRO 1130.0043
THR 1140.0046
VAL 1150.0043
SER 1160.0035
ILE 1170.0031
PHE 1180.0021
PRO 1190.0047
PRO 1200.0043
SER 1210.0043
SER 1220.0093
GLU 1230.0083
GLN 1240.0062
LEU 1250.0050
THR 1260.0053
SER 1270.0053
GLY 1280.0029
GLY 1290.0031
ALA 1300.0040
SER 1310.0028
VAL 1320.0023
VAL 1330.0016
CYS 1340.0040
PHE 1350.0041
LEU 1360.0044
ASN 1370.0053
ASN 1380.0044
PHE 1390.0024
TYR 1400.0039
PRO 1410.0047
LYS 1420.0027
ASP 1430.0045
ILE 1440.0031
ASN 1450.0038
VAL 1460.0011
LYS 1470.0010
TRP 1480.0008
LYS 1490.0033
ILE 1500.0046
ASP 1510.0047
GLY 1520.0024
SER 1530.0038
GLU 1540.0046
ARG 1550.0012
GLN 1560.0033
ASN 1570.0049
GLY 1580.0032
VAL 1590.0033
LEU 1600.0037
ASN 1610.0038
SER 1620.0032
TRP 1630.0023
THR 1640.0073
ASP 1650.0115
GLN 1660.0084
ASP 1670.0130
SER 1680.0175
LYS 1690.0106
ASP 1700.0055
SER 1710.0062
THR 1720.0034
TYR 1730.0028
SER 1740.0036
MET 1750.0040
SER 1760.0032
SER 1770.0029
THR 1780.0022
LEU 1790.0031
THR 1800.0032
LEU 1810.0036
THR 1820.0055
LYS 1830.0026
ASP 1840.0062
GLU 1850.0080
TYR 1860.0046
GLU 1870.0037
ARG 1880.0088
HIS 1890.0060
ASN 1900.0025
SER 1910.0035
TYR 1920.0038
THR 1930.0034
CYS 1940.0025
GLU 1950.0028
ALA 1960.0028
THR 1970.0013
HIS 1980.0026
LYS 1990.0050
THR 2000.0085
SER 2010.0090
THR 2020.0143
SER 2030.0132
PRO 2040.0088
ILE 2050.0065
VAL 2060.0050
LYS 2070.0043
SER 2080.0049
PHE 2090.0043
ASN 2100.0037
ARG 2110.0044
ASN 2120.0083
GLU 2130.0075
CYS 2140.0069
GLU 10.0483
VAL 20.0180
GLN 30.0184
LEU 40.0114
VAL 50.0111
GLU 60.0157
SER 70.0117
GLY 80.0135
GLY 90.0069
GLY 100.0235
LEU 110.0225
VAL 120.0198
LYS 130.0171
PRO 140.0082
GLY 150.0131
GLY 160.0164
SER 170.0166
LEU 180.0144
LYS 190.0116
LEU 200.0100
SER 210.0137
CYS 220.0156
ALA 230.0163
ALA 240.0177
SER 250.0166
GLY 260.0117
PHE 270.0170
ILE 280.0150
PHE 290.0137
SER 300.0118
ASP 310.0117
TYR 320.0072
TYR 330.0024
MET 340.0056
TYR 350.0076
TRP 360.0104
VAL 370.0096
ARG 380.0082
GLN 390.0096
THR 400.0129
PRO 410.0163
GLU 420.0283
LYS 430.0171
ARG 440.0145
LEU 450.0094
GLU 460.0090
TRP 470.0077
VAL 480.0076
ALA 490.0027
THR 500.0017
ILE 510.0007
SER 520.0095
ASP 520.0040
GLY 530.0056
ASN 540.0122
SER 550.0133
TYR 560.0138
THR 570.0101
TYR 580.0094
TYR 590.0082
VAL 600.0086
ASP 610.0313
SER 620.0286
VAL 630.0126
LYS 640.0126
GLY 650.0074
ARG 660.0076
PHE 670.0075
THR 680.0065
ILE 690.0071
SER 700.0140
ARG 710.0105
ASP 720.0105
ASN 730.0165
ALA 740.0191
LYS 750.0159
ASN 760.0177
ASN 770.0148
LEU 780.0141
TYR 790.0151
LEU 800.0126
GLN 810.0119
MET 820.0108
SER 820.0169
SER 820.0159
LEU 820.0065
LYS 830.0058
SER 840.0087
GLU 850.0148
ASP 860.0077
THR 870.0176
ALA 880.0141
ILE 890.0106
TYR 900.0109
TYR 910.0147
CYS 920.0149
ALA 930.0151
ARG 940.0048
ASP 950.0055
GLY 960.0153
PRO 970.0532
THR 980.0711
ASP 990.0772
SER 1000.0235
SER 1000.0165
GLY 1000.0155
TYR 1000.0091
GLY 1000.0051
GLY 1000.0044
PHE 1000.0090
GLY 1010.0132
TYR 1020.0158
TRP 1030.0149
GLY 1040.0170
GLN 1050.0191
GLY 1060.0162
THR 1070.0089
LEU 1080.0097
VAL 1090.0168
THR 1100.0213
VAL 1110.0181
SER 1120.0124
GLU 1130.0062
ALA 1140.0066
LYS 1150.0130
THR 1160.0078
THR 1170.0063
PRO 1180.0065
PRO 1190.0055
SER 1200.0045
VAL 1210.0041
TYR 1220.0043
PRO 1230.0042
LEU 1240.0024
ALA 1250.0023
PRO 1260.0028
GLY 1270.0026
SER 1280.0027
ALA 1290.0038
ALA 1300.0045
GLN 1330.0032
THR 1340.0032
ASN 1350.0056
SER 1360.0041
MET 1370.0048
VAL 1380.0051
THR 1390.0007
LEU 1400.0016
GLY 1410.0030
CYS 1420.0044
LEU 1430.0047
VAL 1440.0041
LYS 1450.0057
GLY 1460.0053
TYR 1470.0042
PHE 1480.0024
PRO 1490.0028
GLU 1500.0042
PRO 1510.0116
VAL 1520.0069
THR 1530.0064
VAL 1540.0078
THR 1560.0060
TRP 1570.0027
ASN 1620.0058
SER 1630.0081
GLY 1640.0135
SER 1650.0155
LEU 1660.0086
SER 1670.0128
SER 1680.0150
GLY 1690.0089
VAL 1710.0018
HIS 1720.0048
THR 1730.0052
PHE 1740.0051
PRO 1750.0039
ALA 1760.0034
VAL 1770.0031
LEU 1780.0063
GLN 1790.0115
SER 1800.0097
ASP 1830.0055
LEU 1840.0037
TYR 1850.0022
THR 1860.0045
LEU 1870.0044
SER 1880.0056
SER 1890.0043
SER 1900.0031
VAL 1910.0021
THR 1920.0053
VAL 1930.0050
PRO 1940.0045
SER 1950.0070
SER 1960.0080
PRO 1980.0081
ARG 1990.0065
PRO 2000.0041
SER 2020.0056
GLU 2030.0026
THR 2040.0047
VAL 2050.0053
THR 2060.0071
CYS 2080.0087
ASN 2090.0096
VAL 2100.0087
ALA 2110.0053
HIS 2120.0058
PRO 2130.0145
ALA 2140.0174
SER 2150.0155
SER 2160.0191
THR 2170.0035
LYS 2180.0134
VAL 2190.0156
ASP 2200.0109
LYS 2210.0070
LYS 2220.0063
ILE 2230.0039
VAL 2260.0074
PRO 2270.0082
ARG 2280.0055
ASP 2320.0082
CYS 2330.0081

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.