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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 85  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0515
ILE 4790.0386
PHE 4800.0223
ILE 4810.0201
SER 4820.0120
ASP 4830.0120
ASP 4840.0143
LYS 4850.0086
ASP 4860.0136
SER 4870.0172
LEU 4880.0126
LYS 4890.0097
CYS 4900.0094
PRO 4910.0132
CYS 4920.0119
ASP 4930.0094
PRO 4940.0045
GLU 4950.0072
MET 4960.0092
VAL 4970.0155
SER 4980.0122
GLN 4990.0125
SER 5000.0210
THR 5010.0202
CYS 5020.0210
ARG 5030.0071
PHE 5040.0082
PHE 5050.0095
VAL 5060.0085
CYS 5070.0051
LYS 5080.0038
CYS 5090.0130
VAL 5100.0162
GLU 5110.0159
ARG 5120.0354
SER 20.0134
VAL 30.0132
LEU 40.0141
SER 50.0154
GLN 60.0152
SER 70.0152
PRO 80.0080
ALA 90.0056
ILE 100.0091
LEU 110.0121
SER 120.0125
ALA 130.0094
SER 140.0132
PRO 150.0082
GLY 160.0142
GLU 170.0135
LYS 180.0081
VAL 190.0090
THR 200.0034
MET 210.0073
THR 220.0111
CYS 230.0154
ARG 240.0144
ALA 250.0107
ARG 260.0160
SER 270.0374
SER 290.0175
VAL 300.0095
SER 310.0065
TYR 320.0062
MET 330.0056
HIS 340.0075
TRP 350.0055
TYR 360.0037
GLN 370.0029
GLN 380.0028
LYS 390.0123
SER 400.0178
GLY 410.0197
SER 420.0141
SER 430.0137
PRO 440.0088
LYS 450.0056
PRO 460.0042
TRP 470.0055
ILE 480.0051
HIS 490.0046
ALA 500.0076
THR 510.0078
SER 520.0095
ASN 530.0064
LEU 540.0070
ALA 550.0057
SER 560.0085
GLY 570.0105
VAL 580.0109
PRO 590.0125
ALA 600.0101
ARG 610.0123
PHE 620.0085
SER 630.0077
GLY 640.0099
SER 650.0122
GLY 660.0145
SER 670.0140
GLY 680.0180
THR 690.0210
SER 700.0215
TYR 710.0082
SER 720.0061
LEU 730.0047
THR 740.0095
ILE 750.0098
SER 760.0109
ARG 770.0119
VAL 780.0085
GLU 790.0106
ALA 800.0114
GLU 810.0172
ASP 820.0182
ALA 830.0156
ALA 840.0107
THR 850.0077
TYR 860.0045
TYR 870.0087
CYS 880.0103
GLN 890.0104
GLN 900.0069
TRP 910.0074
SER 920.0131
SER 930.0126
HIS 940.0123
PRO 950.0076
PRO 960.0088
THR 970.0095
PHE 980.0159
GLY 990.0163
SER 1000.0187
GLY 1010.0112
THR 1020.0057
LYS 1030.0081
LEU 1040.0133
GLU 1050.0121
ILE 1060.0096
LYS 1070.0104
ARG 1080.0100
ALA 1090.0133
ASP 1100.0110
ALA 1110.0116
ALA 1120.0124
PRO 1130.0118
THR 1140.0140
VAL 1150.0141
SER 1160.0101
ILE 1170.0089
PHE 1180.0089
PRO 1190.0183
PRO 1200.0185
SER 1210.0181
SER 1220.0326
GLU 1230.0271
GLN 1240.0176
LEU 1250.0181
THR 1260.0194
SER 1270.0195
GLY 1280.0099
GLY 1290.0118
ALA 1300.0155
SER 1310.0142
VAL 1320.0110
VAL 1330.0058
CYS 1340.0041
PHE 1350.0065
LEU 1360.0093
ASN 1370.0116
ASN 1380.0108
PHE 1390.0114
TYR 1400.0089
PRO 1410.0117
LYS 1420.0146
ASP 1430.0193
ILE 1440.0141
ASN 1450.0198
VAL 1460.0156
LYS 1470.0120
TRP 1480.0106
LYS 1490.0171
ILE 1500.0121
ASP 1510.0120
GLY 1520.0211
SER 1530.0395
GLU 1540.0356
ARG 1550.0223
GLN 1560.0116
ASN 1570.0176
GLY 1580.0200
VAL 1590.0135
LEU 1600.0116
ASN 1610.0139
SER 1620.0154
TRP 1630.0194
THR 1640.0101
ASP 1650.0080
GLN 1660.0066
ASP 1670.0078
SER 1680.0181
LYS 1690.0137
ASP 1700.0022
SER 1710.0067
THR 1720.0080
TYR 1730.0107
SER 1740.0119
MET 1750.0148
SER 1760.0132
SER 1770.0090
THR 1780.0112
LEU 1790.0177
THR 1800.0200
LEU 1810.0169
THR 1820.0181
LYS 1830.0064
ASP 1840.0127
GLU 1850.0158
TYR 1860.0074
GLU 1870.0111
ARG 1880.0216
HIS 1890.0148
ASN 1900.0103
SER 1910.0069
TYR 1920.0089
THR 1930.0117
CYS 1940.0048
GLU 1950.0063
ALA 1960.0120
THR 1970.0113
HIS 1980.0097
LYS 1990.0153
THR 2000.0103
SER 2010.0144
THR 2020.0488
SER 2030.0305
PRO 2040.0244
ILE 2050.0292
VAL 2060.0178
LYS 2070.0159
SER 2080.0094
PHE 2090.0070
ASN 2100.0094
ARG 2110.0109
ASN 2120.0171
GLU 2130.0139
CYS 2140.0152
GLU 10.0256
VAL 20.0197
GLN 30.0119
LEU 40.0104
VAL 50.0124
GLU 60.0146
SER 70.0174
GLY 80.0180
GLY 90.0167
GLY 100.0199
LEU 110.0175
VAL 120.0136
LYS 130.0049
PRO 140.0094
GLY 150.0104
GLY 160.0056
SER 170.0098
LEU 180.0159
LYS 190.0139
LEU 200.0135
SER 210.0134
CYS 220.0107
ALA 230.0062
ALA 240.0034
SER 250.0097
GLY 260.0138
PHE 270.0199
ILE 280.0159
PHE 290.0118
SER 300.0101
ASP 310.0081
TYR 320.0089
TYR 330.0081
MET 340.0029
TYR 350.0025
TRP 360.0027
VAL 370.0163
ARG 380.0172
GLN 390.0177
THR 400.0222
PRO 410.0187
GLU 420.0212
LYS 430.0234
ARG 440.0258
LEU 450.0256
GLU 460.0142
TRP 470.0119
VAL 480.0106
ALA 490.0067
THR 500.0091
ILE 510.0099
SER 520.0118
ASP 520.0095
GLY 530.0074
ASN 540.0069
SER 550.0119
TYR 560.0121
THR 570.0144
TYR 580.0129
TYR 590.0085
VAL 600.0057
ASP 610.0232
SER 620.0173
VAL 630.0050
LYS 640.0129
GLY 650.0152
ARG 660.0123
PHE 670.0050
THR 680.0045
ILE 690.0051
SER 700.0162
ARG 710.0135
ASP 720.0153
ASN 730.0188
ALA 740.0329
LYS 750.0218
ASN 760.0072
ASN 770.0056
LEU 780.0073
TYR 790.0084
LEU 800.0062
GLN 810.0062
MET 820.0062
SER 820.0100
SER 820.0126
LEU 820.0101
LYS 830.0157
SER 840.0178
GLU 850.0215
ASP 860.0144
THR 870.0099
ALA 880.0094
ILE 890.0096
TYR 900.0124
TYR 910.0143
CYS 920.0123
ALA 930.0084
ARG 940.0028
ASP 950.0022
GLY 960.0069
PRO 970.0193
THR 980.0384
ASP 990.0426
SER 1000.0072
SER 1000.0025
GLY 1000.0021
TYR 1000.0051
GLY 1000.0082
GLY 1000.0060
PHE 1000.0041
GLY 1010.0013
TYR 1020.0028
TRP 1030.0137
GLY 1040.0160
GLN 1050.0149
GLY 1060.0155
THR 1070.0158
LEU 1080.0115
VAL 1090.0126
THR 1100.0150
VAL 1110.0110
SER 1120.0180
GLU 1130.0124
ALA 1140.0130
LYS 1150.0078
THR 1160.0035
THR 1170.0065
PRO 1180.0062
PRO 1190.0049
SER 1200.0065
VAL 1210.0047
TYR 1220.0071
PRO 1230.0098
LEU 1240.0094
ALA 1250.0132
PRO 1260.0160
GLY 1270.0185
SER 1280.0212
ALA 1290.0386
ALA 1300.0320
GLN 1330.0282
THR 1340.0325
ASN 1350.0200
SER 1360.0195
MET 1370.0163
VAL 1380.0161
THR 1390.0065
LEU 1400.0043
GLY 1410.0045
CYS 1420.0045
LEU 1430.0034
VAL 1440.0063
LYS 1450.0080
GLY 1460.0098
TYR 1470.0107
PHE 1480.0124
PRO 1490.0136
GLU 1500.0146
PRO 1510.0224
VAL 1520.0124
THR 1530.0123
VAL 1540.0172
THR 1560.0179
TRP 1570.0124
ASN 1620.0178
SER 1630.0255
GLY 1640.0230
SER 1650.0284
LEU 1660.0195
SER 1670.0224
SER 1680.0243
GLY 1690.0082
VAL 1710.0091
HIS 1720.0091
THR 1730.0117
PHE 1740.0141
PRO 1750.0138
ALA 1760.0084
VAL 1770.0190
LEU 1780.0218
GLN 1790.0515
SER 1800.0330
ASP 1830.0216
LEU 1840.0180
TYR 1850.0131
THR 1860.0069
LEU 1870.0072
SER 1880.0095
SER 1890.0108
SER 1900.0089
VAL 1910.0075
THR 1920.0094
VAL 1930.0103
PRO 1940.0125
SER 1950.0251
SER 1960.0306
PRO 1980.0119
ARG 1990.0107
PRO 2000.0134
SER 2020.0163
GLU 2030.0222
THR 2040.0151
VAL 2050.0041
THR 2060.0075
CYS 2080.0147
ASN 2090.0183
VAL 2100.0213
ALA 2110.0125
HIS 2120.0036
PRO 2130.0172
ALA 2140.0246
SER 2150.0223
SER 2160.0295
THR 2170.0076
LYS 2180.0240
VAL 2190.0199
ASP 2200.0128
LYS 2210.0042
LYS 2220.0059
ILE 2230.0070
VAL 2260.0184
PRO 2270.0153
ARG 2280.0172
ASP 2320.0163
CYS 2330.0151

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.