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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 86  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0629
ILE 4790.0232
PHE 4800.0125
ILE 4810.0112
SER 4820.0074
ASP 4830.0076
ASP 4840.0091
LYS 4850.0048
ASP 4860.0062
SER 4870.0090
LEU 4880.0074
LYS 4890.0038
CYS 4900.0030
PRO 4910.0029
CYS 4920.0030
ASP 4930.0036
PRO 4940.0057
GLU 4950.0060
MET 4960.0044
VAL 4970.0051
SER 4980.0053
GLN 4990.0080
SER 5000.0051
THR 5010.0118
CYS 5020.0128
ARG 5030.0083
PHE 5040.0060
PHE 5050.0054
VAL 5060.0054
CYS 5070.0050
LYS 5080.0030
CYS 5090.0028
VAL 5100.0033
GLU 5110.0042
ARG 5120.0106
SER 20.0121
VAL 30.0157
LEU 40.0128
SER 50.0099
GLN 60.0050
SER 70.0047
PRO 80.0125
ALA 90.0132
ILE 100.0116
LEU 110.0069
SER 120.0057
ALA 130.0070
SER 140.0110
PRO 150.0109
GLY 160.0127
GLU 170.0094
LYS 180.0114
VAL 190.0135
THR 200.0034
MET 210.0033
THR 220.0025
CYS 230.0060
ARG 240.0103
ALA 250.0158
ARG 260.0168
SER 270.0195
SER 290.0145
VAL 300.0131
SER 310.0136
TYR 320.0082
MET 330.0087
HIS 340.0086
TRP 350.0042
TYR 360.0046
GLN 370.0052
GLN 380.0054
LYS 390.0097
SER 400.0151
GLY 410.0266
SER 420.0187
SER 430.0107
PRO 440.0069
LYS 450.0060
PRO 460.0083
TRP 470.0077
ILE 480.0090
HIS 490.0122
ALA 500.0145
THR 510.0139
SER 520.0145
ASN 530.0172
LEU 540.0117
ALA 550.0192
SER 560.0332
GLY 570.0355
VAL 580.0181
PRO 590.0185
ALA 600.0211
ARG 610.0184
PHE 620.0073
SER 630.0053
GLY 640.0091
SER 650.0160
GLY 660.0116
SER 670.0142
GLY 680.0132
THR 690.0140
SER 700.0117
TYR 710.0087
SER 720.0057
LEU 730.0043
THR 740.0095
ILE 750.0109
SER 760.0130
ARG 770.0062
VAL 780.0042
GLU 790.0076
ALA 800.0074
GLU 810.0086
ASP 820.0077
ALA 830.0062
ALA 840.0063
THR 850.0055
TYR 860.0030
TYR 870.0032
CYS 880.0032
GLN 890.0061
GLN 900.0062
TRP 910.0054
SER 920.0068
SER 930.0060
HIS 940.0061
PRO 950.0089
PRO 960.0087
THR 970.0089
PHE 980.0067
GLY 990.0065
SER 1000.0061
GLY 1010.0058
THR 1020.0042
LYS 1030.0037
LEU 1040.0038
GLU 1050.0036
ILE 1060.0048
LYS 1070.0063
ARG 1080.0063
ALA 1090.0088
ASP 1100.0130
ALA 1110.0130
ALA 1120.0154
PRO 1130.0078
THR 1140.0089
VAL 1150.0069
SER 1160.0053
ILE 1170.0039
PHE 1180.0080
PRO 1190.0225
PRO 1200.0241
SER 1210.0225
SER 1220.0471
GLU 1230.0430
GLN 1240.0347
LEU 1250.0347
THR 1260.0393
SER 1270.0391
GLY 1280.0216
GLY 1290.0225
ALA 1300.0252
SER 1310.0159
VAL 1320.0120
VAL 1330.0047
CYS 1340.0026
PHE 1350.0048
LEU 1360.0035
ASN 1370.0068
ASN 1380.0051
PHE 1390.0049
TYR 1400.0064
PRO 1410.0063
LYS 1420.0051
ASP 1430.0133
ILE 1440.0125
ASN 1450.0136
VAL 1460.0121
LYS 1470.0149
TRP 1480.0196
LYS 1490.0259
ILE 1500.0215
ASP 1510.0203
GLY 1520.0258
SER 1530.0401
GLU 1540.0335
ARG 1550.0275
GLN 1560.0249
ASN 1570.0295
GLY 1580.0227
VAL 1590.0210
LEU 1600.0166
ASN 1610.0070
SER 1620.0069
TRP 1630.0094
THR 1640.0081
ASP 1650.0089
GLN 1660.0073
ASP 1670.0060
SER 1680.0058
LYS 1690.0134
ASP 1700.0067
SER 1710.0084
THR 1720.0060
TYR 1730.0041
SER 1740.0047
MET 1750.0054
SER 1760.0067
SER 1770.0077
THR 1780.0111
LEU 1790.0207
THR 1800.0214
LEU 1810.0235
THR 1820.0291
LYS 1830.0158
ASP 1840.0113
GLU 1850.0269
TYR 1860.0164
GLU 1870.0159
ARG 1880.0371
HIS 1890.0282
ASN 1900.0200
SER 1910.0133
TYR 1920.0186
THR 1930.0230
CYS 1940.0124
GLU 1950.0081
ALA 1960.0086
THR 1970.0128
HIS 1980.0113
LYS 1990.0108
THR 2000.0188
SER 2010.0139
THR 2020.0116
SER 2030.0239
PRO 2040.0139
ILE 2050.0098
VAL 2060.0108
LYS 2070.0086
SER 2080.0136
PHE 2090.0118
ASN 2100.0205
ARG 2110.0228
ASN 2120.0405
GLU 2130.0289
CYS 2140.0357
GLU 10.0121
VAL 20.0153
GLN 30.0098
LEU 40.0081
VAL 50.0067
GLU 60.0100
SER 70.0095
GLY 80.0103
GLY 90.0092
GLY 100.0161
LEU 110.0132
VAL 120.0154
LYS 130.0220
PRO 140.0135
GLY 150.0126
GLY 160.0089
SER 170.0054
LEU 180.0050
LYS 190.0073
LEU 200.0072
SER 210.0085
CYS 220.0099
ALA 230.0064
ALA 240.0097
SER 250.0153
GLY 260.0197
PHE 270.0245
ILE 280.0201
PHE 290.0172
SER 300.0155
ASP 310.0111
TYR 320.0127
TYR 330.0131
MET 340.0062
TYR 350.0061
TRP 360.0062
VAL 370.0088
ARG 380.0074
GLN 390.0071
THR 400.0113
PRO 410.0170
GLU 420.0166
LYS 430.0121
ARG 440.0088
LEU 450.0081
GLU 460.0089
TRP 470.0084
VAL 480.0067
ALA 490.0026
THR 500.0054
ILE 510.0092
SER 520.0137
ASP 520.0142
GLY 530.0137
ASN 540.0145
SER 550.0175
TYR 560.0131
THR 570.0109
TYR 580.0057
TYR 590.0074
VAL 600.0122
ASP 610.0270
SER 620.0206
VAL 630.0151
LYS 640.0196
GLY 650.0258
ARG 660.0233
PHE 670.0100
THR 680.0095
ILE 690.0094
SER 700.0148
ARG 710.0108
ASP 720.0070
ASN 730.0095
ALA 740.0025
LYS 750.0050
ASN 760.0056
ASN 770.0049
LEU 780.0079
TYR 790.0070
LEU 800.0067
GLN 810.0072
MET 820.0124
SER 820.0133
SER 820.0162
LEU 820.0156
LYS 830.0192
SER 840.0190
GLU 850.0258
ASP 860.0189
THR 870.0123
ALA 880.0071
ILE 890.0060
TYR 900.0092
TYR 910.0078
CYS 920.0065
ALA 930.0056
ARG 940.0124
ASP 950.0132
GLY 960.0152
PRO 970.0198
THR 980.0224
ASP 990.0265
SER 1000.0116
SER 1000.0088
GLY 1000.0058
TYR 1000.0059
GLY 1000.0053
GLY 1000.0078
PHE 1000.0084
GLY 1010.0106
TYR 1020.0115
TRP 1030.0080
GLY 1040.0092
GLN 1050.0097
GLY 1060.0099
THR 1070.0115
LEU 1080.0091
VAL 1090.0069
THR 1100.0071
VAL 1110.0080
SER 1120.0178
GLU 1130.0149
ALA 1140.0139
LYS 1150.0146
THR 1160.0119
THR 1170.0148
PRO 1180.0156
PRO 1190.0084
SER 1200.0090
VAL 1210.0135
TYR 1220.0164
PRO 1230.0183
LEU 1240.0199
ALA 1250.0213
PRO 1260.0225
GLY 1270.0297
SER 1280.0206
ALA 1290.0498
ALA 1300.0295
GLN 1330.0203
THR 1340.0208
ASN 1350.0260
SER 1360.0217
MET 1370.0179
VAL 1380.0138
THR 1390.0134
LEU 1400.0132
GLY 1410.0150
CYS 1420.0111
LEU 1430.0107
VAL 1440.0100
LYS 1450.0072
GLY 1460.0080
TYR 1470.0076
PHE 1480.0139
PRO 1490.0127
GLU 1500.0099
PRO 1510.0115
VAL 1520.0094
THR 1530.0090
VAL 1540.0058
THR 1560.0033
TRP 1570.0097
ASN 1620.0234
SER 1630.0172
GLY 1640.0105
SER 1650.0221
LEU 1660.0126
SER 1670.0103
SER 1680.0102
GLY 1690.0089
VAL 1710.0101
HIS 1720.0102
THR 1730.0114
PHE 1740.0099
PRO 1750.0099
ALA 1760.0098
VAL 1770.0168
LEU 1780.0067
GLN 1790.0328
SER 1800.0351
ASP 1830.0317
LEU 1840.0239
TYR 1850.0126
THR 1860.0089
LEU 1870.0071
SER 1880.0073
SER 1890.0099
SER 1900.0118
VAL 1910.0122
THR 1920.0174
VAL 1930.0155
PRO 1940.0170
SER 1950.0224
SER 1960.0271
PRO 1980.0202
ARG 1990.0111
PRO 2000.0066
SER 2020.0180
GLU 2030.0104
THR 2040.0160
VAL 2050.0195
THR 2060.0220
CYS 2080.0147
ASN 2090.0101
VAL 2100.0088
ALA 2110.0126
HIS 2120.0094
PRO 2130.0109
ALA 2140.0120
SER 2150.0204
SER 2160.0238
THR 2170.0125
LYS 2180.0232
VAL 2190.0220
ASP 2200.0132
LYS 2210.0145
LYS 2220.0187
ILE 2230.0211
VAL 2260.0289
PRO 2270.0412
ARG 2280.0307
ASP 2320.0629
CYS 2330.0552

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.