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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 87  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0707
ILE 4790.0405
PHE 4800.0268
ILE 4810.0272
SER 4820.0206
ASP 4830.0219
ASP 4840.0187
LYS 4850.0071
ASP 4860.0161
SER 4870.0200
LEU 4880.0163
LYS 4890.0146
CYS 4900.0123
PRO 4910.0171
CYS 4920.0155
ASP 4930.0129
PRO 4940.0023
GLU 4950.0091
MET 4960.0148
VAL 4970.0313
SER 4980.0209
GLN 4990.0173
SER 5000.0495
THR 5010.0271
CYS 5020.0307
ARG 5030.0061
PHE 5040.0171
PHE 5050.0153
VAL 5060.0101
CYS 5070.0064
LYS 5080.0063
CYS 5090.0217
VAL 5100.0268
GLU 5110.0280
ARG 5120.0420
SER 20.0084
VAL 30.0085
LEU 40.0088
SER 50.0113
GLN 60.0105
SER 70.0101
PRO 80.0142
ALA 90.0134
ILE 100.0195
LEU 110.0185
SER 120.0169
ALA 130.0149
SER 140.0209
PRO 150.0082
GLY 160.0071
GLU 170.0052
LYS 180.0131
VAL 190.0177
THR 200.0048
MET 210.0064
THR 220.0114
CYS 230.0110
ARG 240.0056
ALA 250.0072
ARG 260.0174
SER 270.0401
SER 290.0219
VAL 300.0178
SER 310.0182
TYR 320.0102
MET 330.0099
HIS 340.0124
TRP 350.0099
TYR 360.0088
GLN 370.0079
GLN 380.0058
LYS 390.0063
SER 400.0124
GLY 410.0096
SER 420.0078
SER 430.0117
PRO 440.0105
LYS 450.0087
PRO 460.0104
TRP 470.0082
ILE 480.0074
HIS 490.0069
ALA 500.0118
THR 510.0121
SER 520.0102
ASN 530.0052
LEU 540.0047
ALA 550.0071
SER 560.0250
GLY 570.0176
VAL 580.0105
PRO 590.0166
ALA 600.0208
ARG 610.0256
PHE 620.0163
SER 630.0117
GLY 640.0119
SER 650.0146
GLY 660.0120
SER 670.0106
GLY 680.0136
THR 690.0147
SER 700.0123
TYR 710.0088
SER 720.0084
LEU 730.0100
THR 740.0168
ILE 750.0186
SER 760.0194
ARG 770.0159
VAL 780.0135
GLU 790.0085
ALA 800.0062
GLU 810.0102
ASP 820.0136
ALA 830.0084
ALA 840.0067
THR 850.0029
TYR 860.0056
TYR 870.0091
CYS 880.0109
GLN 890.0118
GLN 900.0095
TRP 910.0124
SER 920.0208
SER 930.0200
HIS 940.0197
PRO 950.0130
PRO 960.0128
THR 970.0099
PHE 980.0146
GLY 990.0151
SER 1000.0162
GLY 1010.0080
THR 1020.0059
LYS 1030.0093
LEU 1040.0122
GLU 1050.0135
ILE 1060.0099
LYS 1070.0225
ARG 1080.0207
ALA 1090.0224
ASP 1100.0061
ALA 1110.0066
ALA 1120.0107
PRO 1130.0123
THR 1140.0107
VAL 1150.0143
SER 1160.0092
ILE 1170.0078
PHE 1180.0065
PRO 1190.0072
PRO 1200.0070
SER 1210.0068
SER 1220.0145
GLU 1230.0104
GLN 1240.0052
LEU 1250.0087
THR 1260.0090
SER 1270.0095
GLY 1280.0101
GLY 1290.0085
ALA 1300.0067
SER 1310.0051
VAL 1320.0035
VAL 1330.0017
CYS 1340.0047
PHE 1350.0050
LEU 1360.0078
ASN 1370.0059
ASN 1380.0026
PHE 1390.0045
TYR 1400.0026
PRO 1410.0034
LYS 1420.0095
ASP 1430.0141
ILE 1440.0121
ASN 1450.0102
VAL 1460.0100
LYS 1470.0081
TRP 1480.0077
LYS 1490.0137
ILE 1500.0114
ASP 1510.0107
GLY 1520.0155
SER 1530.0277
GLU 1540.0221
ARG 1550.0139
GLN 1560.0085
ASN 1570.0078
GLY 1580.0139
VAL 1590.0095
LEU 1600.0107
ASN 1610.0037
SER 1620.0056
TRP 1630.0103
THR 1640.0099
ASP 1650.0116
GLN 1660.0106
ASP 1670.0099
SER 1680.0103
LYS 1690.0112
ASP 1700.0114
SER 1710.0124
THR 1720.0077
TYR 1730.0039
SER 1740.0046
MET 1750.0081
SER 1760.0063
SER 1770.0038
THR 1780.0062
LEU 1790.0093
THR 1800.0099
LEU 1810.0067
THR 1820.0072
LYS 1830.0050
ASP 1840.0053
GLU 1850.0065
TYR 1860.0050
GLU 1870.0070
ARG 1880.0097
HIS 1890.0069
ASN 1900.0044
SER 1910.0062
TYR 1920.0091
THR 1930.0111
CYS 1940.0049
GLU 1950.0024
ALA 1960.0073
THR 1970.0061
HIS 1980.0116
LYS 1990.0185
THR 2000.0250
SER 2010.0181
THR 2020.0255
SER 2030.0507
PRO 2040.0293
ILE 2050.0336
VAL 2060.0171
LYS 2070.0135
SER 2080.0083
PHE 2090.0092
ASN 2100.0071
ARG 2110.0065
ASN 2120.0163
GLU 2130.0176
CYS 2140.0186
GLU 10.0354
VAL 20.0147
GLN 30.0157
LEU 40.0081
VAL 50.0104
GLU 60.0132
SER 70.0188
GLY 80.0158
GLY 90.0122
GLY 100.0197
LEU 110.0195
VAL 120.0199
LYS 130.0224
PRO 140.0190
GLY 150.0136
GLY 160.0069
SER 170.0008
LEU 180.0077
LYS 190.0155
LEU 200.0159
SER 210.0173
CYS 220.0155
ALA 230.0108
ALA 240.0082
SER 250.0189
GLY 260.0159
PHE 270.0196
ILE 280.0135
PHE 290.0084
SER 300.0086
ASP 310.0098
TYR 320.0089
TYR 330.0065
MET 340.0034
TYR 350.0040
TRP 360.0077
VAL 370.0091
ARG 380.0097
GLN 390.0117
THR 400.0139
PRO 410.0105
GLU 420.0183
LYS 430.0174
ARG 440.0194
LEU 450.0201
GLU 460.0095
TRP 470.0087
VAL 480.0081
ALA 490.0084
THR 500.0068
ILE 510.0044
SER 520.0077
ASP 520.0055
GLY 530.0089
ASN 540.0143
SER 550.0121
TYR 560.0085
THR 570.0029
TYR 580.0058
TYR 590.0056
VAL 600.0085
ASP 610.0075
SER 620.0083
VAL 630.0072
LYS 640.0064
GLY 650.0111
ARG 660.0103
PHE 670.0104
THR 680.0135
ILE 690.0154
SER 700.0276
ARG 710.0171
ASP 720.0158
ASN 730.0190
ALA 740.0391
LYS 750.0209
ASN 760.0090
ASN 770.0066
LEU 780.0132
TYR 790.0195
LEU 800.0174
GLN 810.0166
MET 820.0074
SER 820.0052
SER 820.0079
LEU 820.0055
LYS 830.0098
SER 840.0141
GLU 850.0065
ASP 860.0041
THR 870.0075
ALA 880.0060
ILE 890.0082
TYR 900.0069
TYR 910.0116
CYS 920.0101
ALA 930.0069
ARG 940.0053
ASP 950.0054
GLY 960.0060
PRO 970.0106
THR 980.0261
ASP 990.0257
SER 1000.0024
SER 1000.0043
GLY 1000.0060
TYR 1000.0061
GLY 1000.0077
GLY 1000.0066
PHE 1000.0067
GLY 1010.0048
TYR 1020.0050
TRP 1030.0120
GLY 1040.0125
GLN 1050.0106
GLY 1060.0128
THR 1070.0089
LEU 1080.0082
VAL 1090.0137
THR 1100.0158
VAL 1110.0153
SER 1120.0223
GLU 1130.0194
ALA 1140.0118
LYS 1150.0188
THR 1160.0082
THR 1170.0108
PRO 1180.0118
PRO 1190.0137
SER 1200.0172
VAL 1210.0101
TYR 1220.0044
PRO 1230.0047
LEU 1240.0055
ALA 1250.0112
PRO 1260.0151
GLY 1270.0177
SER 1280.0304
ALA 1290.0707
ALA 1300.0323
GLN 1330.0327
THR 1340.0223
ASN 1350.0190
SER 1360.0161
MET 1370.0122
VAL 1380.0153
THR 1390.0119
LEU 1400.0079
GLY 1410.0053
CYS 1420.0086
LEU 1430.0098
VAL 1440.0145
LYS 1450.0187
GLY 1460.0170
TYR 1470.0153
PHE 1480.0070
PRO 1490.0078
GLU 1500.0122
PRO 1510.0166
VAL 1520.0125
THR 1530.0132
VAL 1540.0116
THR 1560.0160
TRP 1570.0100
ASN 1620.0121
SER 1630.0243
GLY 1640.0321
SER 1650.0375
LEU 1660.0211
SER 1670.0255
SER 1680.0109
GLY 1690.0126
VAL 1710.0119
HIS 1720.0087
THR 1730.0122
PHE 1740.0131
PRO 1750.0139
ALA 1760.0155
VAL 1770.0143
LEU 1780.0233
GLN 1790.0655
SER 1800.0471
ASP 1830.0110
LEU 1840.0149
TYR 1850.0151
THR 1860.0179
LEU 1870.0173
SER 1880.0174
SER 1890.0087
SER 1900.0061
VAL 1910.0087
THR 1920.0128
VAL 1930.0084
PRO 1940.0093
SER 1950.0141
SER 1960.0305
PRO 1980.0127
ARG 1990.0024
PRO 2000.0089
SER 2020.0113
GLU 2030.0153
THR 2040.0152
VAL 2050.0056
THR 2060.0084
CYS 2080.0110
ASN 2090.0117
VAL 2100.0143
ALA 2110.0103
HIS 2120.0067
PRO 2130.0103
ALA 2140.0115
SER 2150.0143
SER 2160.0167
THR 2170.0126
LYS 2180.0146
VAL 2190.0156
ASP 2200.0088
LYS 2210.0074
LYS 2220.0069
ILE 2230.0102
VAL 2260.0194
PRO 2270.0228
ARG 2280.0204
ASP 2320.0252
CYS 2330.0107

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.