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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 88  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0843
ILE 4790.0155
PHE 4800.0098
ILE 4810.0092
SER 4820.0173
ASP 4830.0137
ASP 4840.0154
LYS 4850.0082
ASP 4860.0078
SER 4870.0111
LEU 4880.0076
LYS 4890.0109
CYS 4900.0071
PRO 4910.0036
CYS 4920.0052
ASP 4930.0052
PRO 4940.0042
GLU 4950.0025
MET 4960.0062
VAL 4970.0198
SER 4980.0122
GLN 4990.0081
SER 5000.0387
THR 5010.0127
CYS 5020.0163
ARG 5030.0047
PHE 5040.0098
PHE 5050.0069
VAL 5060.0026
CYS 5070.0046
LYS 5080.0073
CYS 5090.0080
VAL 5100.0066
GLU 5110.0036
ARG 5120.0073
SER 20.0047
VAL 30.0069
LEU 40.0064
SER 50.0072
GLN 60.0041
SER 70.0041
PRO 80.0187
ALA 90.0210
ILE 100.0249
LEU 110.0137
SER 120.0122
ALA 130.0122
SER 140.0142
PRO 150.0093
GLY 160.0109
GLU 170.0111
LYS 180.0083
VAL 190.0070
THR 200.0070
MET 210.0061
THR 220.0080
CYS 230.0075
ARG 240.0095
ALA 250.0074
ARG 260.0088
SER 270.0100
SER 290.0056
VAL 300.0045
SER 310.0089
TYR 320.0097
MET 330.0082
HIS 340.0093
TRP 350.0074
TYR 360.0101
GLN 370.0118
GLN 380.0161
LYS 390.0206
SER 400.0283
GLY 410.0346
SER 420.0300
SER 430.0250
PRO 440.0197
LYS 450.0165
PRO 460.0120
TRP 470.0104
ILE 480.0091
HIS 490.0119
ALA 500.0134
THR 510.0110
SER 520.0100
ASN 530.0155
LEU 540.0131
ALA 550.0169
SER 560.0464
GLY 570.0254
VAL 580.0134
PRO 590.0134
ALA 600.0129
ARG 610.0111
PHE 620.0101
SER 630.0084
GLY 640.0079
SER 650.0040
GLY 660.0063
SER 670.0089
GLY 680.0088
THR 690.0084
SER 700.0090
TYR 710.0039
SER 720.0063
LEU 730.0078
THR 740.0086
ILE 750.0077
SER 760.0088
ARG 770.0113
VAL 780.0080
GLU 790.0065
ALA 800.0045
GLU 810.0041
ASP 820.0057
ALA 830.0069
ALA 840.0071
THR 850.0069
TYR 860.0075
TYR 870.0068
CYS 880.0057
GLN 890.0071
GLN 900.0072
TRP 910.0070
SER 920.0078
SER 930.0069
HIS 940.0059
PRO 950.0063
PRO 960.0065
THR 970.0059
PHE 980.0065
GLY 990.0056
SER 1000.0055
GLY 1010.0079
THR 1020.0045
LYS 1030.0079
LEU 1040.0067
GLU 1050.0083
ILE 1060.0074
LYS 1070.0184
ARG 1080.0181
ALA 1090.0208
ASP 1100.0105
ALA 1110.0151
ALA 1120.0200
PRO 1130.0161
THR 1140.0165
VAL 1150.0160
SER 1160.0175
ILE 1170.0140
PHE 1180.0127
PRO 1190.0093
PRO 1200.0131
SER 1210.0156
SER 1220.0323
GLU 1230.0206
GLN 1240.0167
LEU 1250.0265
THR 1260.0385
SER 1270.0310
GLY 1280.0198
GLY 1290.0088
ALA 1300.0137
SER 1310.0090
VAL 1320.0026
VAL 1330.0046
CYS 1340.0128
PHE 1350.0134
LEU 1360.0158
ASN 1370.0126
ASN 1380.0074
PHE 1390.0066
TYR 1400.0041
PRO 1410.0043
LYS 1420.0066
ASP 1430.0050
ILE 1440.0064
ASN 1450.0123
VAL 1460.0088
LYS 1470.0078
TRP 1480.0075
LYS 1490.0093
ILE 1500.0071
ASP 1510.0062
GLY 1520.0091
SER 1530.0081
GLU 1540.0080
ARG 1550.0045
GLN 1560.0108
ASN 1570.0155
GLY 1580.0162
VAL 1590.0100
LEU 1600.0078
ASN 1610.0140
SER 1620.0125
TRP 1630.0178
THR 1640.0225
ASP 1650.0196
GLN 1660.0126
ASP 1670.0134
SER 1680.0116
LYS 1690.0162
ASP 1700.0101
SER 1710.0099
THR 1720.0094
TYR 1730.0117
SER 1740.0127
MET 1750.0150
SER 1760.0110
SER 1770.0081
THR 1780.0051
LEU 1790.0092
THR 1800.0110
LEU 1810.0133
THR 1820.0133
LYS 1830.0125
ASP 1840.0093
GLU 1850.0120
TYR 1860.0107
GLU 1870.0050
ARG 1880.0078
HIS 1890.0067
ASN 1900.0060
SER 1910.0057
TYR 1920.0067
THR 1930.0072
CYS 1940.0091
GLU 1950.0117
ALA 1960.0150
THR 1970.0177
HIS 1980.0150
LYS 1990.0134
THR 2000.0249
SER 2010.0191
THR 2020.0234
SER 2030.0444
PRO 2040.0279
ILE 2050.0057
VAL 2060.0074
LYS 2070.0037
SER 2080.0057
PHE 2090.0086
ASN 2100.0090
ARG 2110.0095
ASN 2120.0133
GLU 2130.0093
CYS 2140.0131
GLU 10.0101
VAL 20.0070
GLN 30.0185
LEU 40.0104
VAL 50.0079
GLU 60.0056
SER 70.0078
GLY 80.0145
GLY 90.0174
GLY 100.0202
LEU 110.0171
VAL 120.0172
LYS 130.0206
PRO 140.0133
GLY 150.0177
GLY 160.0170
SER 170.0111
LEU 180.0104
LYS 190.0082
LEU 200.0087
SER 210.0068
CYS 220.0059
ALA 230.0063
ALA 240.0074
SER 250.0127
GLY 260.0100
PHE 270.0105
ILE 280.0113
PHE 290.0080
SER 300.0045
ASP 310.0053
TYR 320.0051
TYR 330.0074
MET 340.0064
TYR 350.0056
TRP 360.0052
VAL 370.0116
ARG 380.0104
GLN 390.0104
THR 400.0113
PRO 410.0089
GLU 420.0165
LYS 430.0143
ARG 440.0160
LEU 450.0162
GLU 460.0139
TRP 470.0114
VAL 480.0066
ALA 490.0094
THR 500.0100
ILE 510.0146
SER 520.0109
ASP 520.0142
GLY 530.0171
ASN 540.0260
SER 550.0256
TYR 560.0221
THR 570.0196
TYR 580.0089
TYR 590.0039
VAL 600.0085
ASP 610.0332
SER 620.0301
VAL 630.0082
LYS 640.0081
GLY 650.0142
ARG 660.0155
PHE 670.0148
THR 680.0172
ILE 690.0183
SER 700.0188
ARG 710.0126
ASP 720.0054
ASN 730.0033
ALA 740.0079
LYS 750.0085
ASN 760.0051
ASN 770.0056
LEU 780.0092
TYR 790.0123
LEU 800.0137
GLN 810.0109
MET 820.0098
SER 820.0142
SER 820.0172
LEU 820.0096
LYS 830.0135
SER 840.0159
GLU 850.0259
ASP 860.0139
THR 870.0158
ALA 880.0114
ILE 890.0071
TYR 900.0054
TYR 910.0081
CYS 920.0057
ALA 930.0066
ARG 940.0076
ASP 950.0074
GLY 960.0070
PRO 970.0072
THR 980.0160
ASP 990.0234
SER 1000.0082
SER 1000.0081
GLY 1000.0106
TYR 1000.0123
GLY 1000.0130
GLY 1000.0101
PHE 1000.0092
GLY 1010.0073
TYR 1020.0091
TRP 1030.0169
GLY 1040.0151
GLN 1050.0141
GLY 1060.0083
THR 1070.0074
LEU 1080.0123
VAL 1090.0158
THR 1100.0180
VAL 1110.0154
SER 1120.0242
GLU 1130.0203
ALA 1140.0208
LYS 1150.0251
THR 1160.0119
THR 1170.0147
PRO 1180.0072
PRO 1190.0114
SER 1200.0208
VAL 1210.0189
TYR 1220.0158
PRO 1230.0131
LEU 1240.0090
ALA 1250.0214
PRO 1260.0324
GLY 1270.0451
SER 1280.0276
ALA 1290.0843
ALA 1300.0654
GLN 1330.0329
THR 1340.0229
ASN 1350.0306
SER 1360.0287
MET 1370.0224
VAL 1380.0297
THR 1390.0227
LEU 1400.0166
GLY 1410.0125
CYS 1420.0103
LEU 1430.0153
VAL 1440.0189
LYS 1450.0196
GLY 1460.0125
TYR 1470.0100
PHE 1480.0089
PRO 1490.0051
GLU 1500.0072
PRO 1510.0206
VAL 1520.0190
THR 1530.0243
VAL 1540.0149
THR 1560.0122
TRP 1570.0106
ASN 1620.0156
SER 1630.0145
GLY 1640.0189
SER 1650.0190
LEU 1660.0180
SER 1670.0229
SER 1680.0220
GLY 1690.0147
VAL 1710.0157
HIS 1720.0129
THR 1730.0108
PHE 1740.0104
PRO 1750.0156
ALA 1760.0122
VAL 1770.0228
LEU 1780.0165
GLN 1790.0140
SER 1800.0225
ASP 1830.0329
LEU 1840.0156
TYR 1850.0047
THR 1860.0180
LEU 1870.0149
SER 1880.0105
SER 1890.0107
SER 1900.0100
VAL 1910.0106
THR 1920.0176
VAL 1930.0243
PRO 1940.0318
SER 1950.0520
SER 1960.0529
PRO 1980.0120
ARG 1990.0182
PRO 2000.0309
SER 2020.0248
GLU 2030.0181
THR 2040.0285
VAL 2050.0109
THR 2060.0100
CYS 2080.0154
ASN 2090.0127
VAL 2100.0150
ALA 2110.0289
HIS 2120.0227
PRO 2130.0278
ALA 2140.0243
SER 2150.0202
SER 2160.0301
THR 2170.0193
LYS 2180.0185
VAL 2190.0187
ASP 2200.0135
LYS 2210.0127
LYS 2220.0130
ILE 2230.0133
VAL 2260.0250
PRO 2270.0373
ARG 2280.0321
ASP 2320.0494
CYS 2330.0388

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.