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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 89  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0492
ILE 4790.0165
PHE 4800.0086
ILE 4810.0076
SER 4820.0112
ASP 4830.0103
ASP 4840.0124
LYS 4850.0065
ASP 4860.0118
SER 4870.0133
LEU 4880.0059
LYS 4890.0045
CYS 4900.0067
PRO 4910.0065
CYS 4920.0054
ASP 4930.0057
PRO 4940.0052
GLU 4950.0051
MET 4960.0061
VAL 4970.0108
SER 4980.0079
GLN 4990.0066
SER 5000.0118
THR 5010.0072
CYS 5020.0055
ARG 5030.0072
PHE 5040.0088
PHE 5050.0082
VAL 5060.0044
CYS 5070.0036
LYS 5080.0029
CYS 5090.0092
VAL 5100.0126
GLU 5110.0127
ARG 5120.0141
SER 20.0121
VAL 30.0147
LEU 40.0123
SER 50.0118
GLN 60.0146
SER 70.0172
PRO 80.0140
ALA 90.0080
ILE 100.0072
LEU 110.0111
SER 120.0090
ALA 130.0132
SER 140.0234
PRO 150.0223
GLY 160.0225
GLU 170.0215
LYS 180.0209
VAL 190.0238
THR 200.0174
MET 210.0164
THR 220.0153
CYS 230.0184
ARG 240.0180
ALA 250.0164
ARG 260.0229
SER 270.0197
SER 290.0086
VAL 300.0113
SER 310.0128
TYR 320.0086
MET 330.0070
HIS 340.0064
TRP 350.0092
TYR 360.0131
GLN 370.0146
GLN 380.0211
LYS 390.0200
SER 400.0245
GLY 410.0492
SER 420.0332
SER 430.0239
PRO 440.0233
LYS 450.0225
PRO 460.0218
TRP 470.0129
ILE 480.0100
HIS 490.0101
ALA 500.0103
THR 510.0092
SER 520.0113
ASN 530.0161
LEU 540.0162
ALA 550.0175
SER 560.0417
GLY 570.0248
VAL 580.0165
PRO 590.0114
ALA 600.0111
ARG 610.0145
PHE 620.0043
SER 630.0096
GLY 640.0141
SER 650.0140
GLY 660.0112
SER 670.0117
GLY 680.0111
THR 690.0160
SER 700.0143
TYR 710.0115
SER 720.0112
LEU 730.0107
THR 740.0196
ILE 750.0173
SER 760.0193
ARG 770.0226
VAL 780.0160
GLU 790.0118
ALA 800.0148
GLU 810.0178
ASP 820.0183
ALA 830.0111
ALA 840.0115
THR 850.0168
TYR 860.0136
TYR 870.0129
CYS 880.0122
GLN 890.0063
GLN 900.0069
TRP 910.0081
SER 920.0125
SER 930.0122
HIS 940.0101
PRO 950.0127
PRO 960.0085
THR 970.0082
PHE 980.0134
GLY 990.0177
SER 1000.0221
GLY 1010.0200
THR 1020.0134
LYS 1030.0104
LEU 1040.0020
GLU 1050.0047
ILE 1060.0093
LYS 1070.0086
ARG 1080.0116
ALA 1090.0137
ASP 1100.0132
ALA 1110.0138
ALA 1120.0126
PRO 1130.0123
THR 1140.0148
VAL 1150.0114
SER 1160.0099
ILE 1170.0094
PHE 1180.0098
PRO 1190.0107
PRO 1200.0099
SER 1210.0135
SER 1220.0246
GLU 1230.0190
GLN 1240.0124
LEU 1250.0085
THR 1260.0176
SER 1270.0223
GLY 1280.0275
GLY 1290.0191
ALA 1300.0067
SER 1310.0102
VAL 1320.0098
VAL 1330.0088
CYS 1340.0050
PHE 1350.0048
LEU 1360.0084
ASN 1370.0132
ASN 1380.0151
PHE 1390.0149
TYR 1400.0064
PRO 1410.0086
LYS 1420.0192
ASP 1430.0221
ILE 1440.0128
ASN 1450.0151
VAL 1460.0065
LYS 1470.0048
TRP 1480.0048
LYS 1490.0045
ILE 1500.0075
ASP 1510.0103
GLY 1520.0086
SER 1530.0050
GLU 1540.0137
ARG 1550.0035
GLN 1560.0084
ASN 1570.0148
GLY 1580.0058
VAL 1590.0080
LEU 1600.0118
ASN 1610.0100
SER 1620.0101
TRP 1630.0048
THR 1640.0103
ASP 1650.0135
GLN 1660.0113
ASP 1670.0094
SER 1680.0186
LYS 1690.0355
ASP 1700.0203
SER 1710.0140
THR 1720.0213
TYR 1730.0166
SER 1740.0133
MET 1750.0107
SER 1760.0032
SER 1770.0050
THR 1780.0096
LEU 1790.0104
THR 1800.0082
LEU 1810.0040
THR 1820.0084
LYS 1830.0110
ASP 1840.0153
GLU 1850.0129
TYR 1860.0062
GLU 1870.0123
ARG 1880.0165
HIS 1890.0109
ASN 1900.0066
SER 1910.0072
TYR 1920.0048
THR 1930.0042
CYS 1940.0026
GLU 1950.0064
ALA 1960.0100
THR 1970.0110
HIS 1980.0117
LYS 1990.0211
THR 2000.0151
SER 2010.0016
THR 2020.0456
SER 2030.0332
PRO 2040.0237
ILE 2050.0286
VAL 2060.0133
LYS 2070.0079
SER 2080.0026
PHE 2090.0101
ASN 2100.0072
ARG 2110.0062
ASN 2120.0108
GLU 2130.0116
CYS 2140.0129
GLU 10.0122
VAL 20.0100
GLN 30.0084
LEU 40.0077
VAL 50.0106
GLU 60.0094
SER 70.0200
GLY 80.0241
GLY 90.0192
GLY 100.0147
LEU 110.0142
VAL 120.0163
LYS 130.0208
PRO 140.0179
GLY 150.0160
GLY 160.0212
SER 170.0197
LEU 180.0189
LYS 190.0174
LEU 200.0143
SER 210.0136
CYS 220.0129
ALA 230.0131
ALA 240.0141
SER 250.0110
GLY 260.0079
PHE 270.0075
ILE 280.0039
PHE 290.0061
SER 300.0043
ASP 310.0059
TYR 320.0064
TYR 330.0061
MET 340.0042
TYR 350.0046
TRP 360.0047
VAL 370.0117
ARG 380.0143
GLN 390.0171
THR 400.0264
PRO 410.0389
GLU 420.0488
LYS 430.0347
ARG 440.0322
LEU 450.0283
GLU 460.0144
TRP 470.0094
VAL 480.0072
ALA 490.0067
THR 500.0077
ILE 510.0118
SER 520.0150
ASP 520.0116
GLY 530.0164
ASN 540.0212
SER 550.0187
TYR 560.0204
THR 570.0204
TYR 580.0070
TYR 590.0092
VAL 600.0132
ASP 610.0220
SER 620.0240
VAL 630.0236
LYS 640.0176
GLY 650.0166
ARG 660.0169
PHE 670.0070
THR 680.0068
ILE 690.0102
SER 700.0158
ARG 710.0095
ASP 720.0067
ASN 730.0106
ALA 740.0274
LYS 750.0287
ASN 760.0127
ASN 770.0142
LEU 780.0152
TYR 790.0112
LEU 800.0098
GLN 810.0109
MET 820.0107
SER 820.0106
SER 820.0101
LEU 820.0091
LYS 830.0086
SER 840.0082
GLU 850.0040
ASP 860.0105
THR 870.0127
ALA 880.0091
ILE 890.0085
TYR 900.0083
TYR 910.0086
CYS 920.0054
ALA 930.0072
ARG 940.0039
ASP 950.0018
GLY 960.0058
PRO 970.0239
THR 980.0274
ASP 990.0232
SER 1000.0065
SER 1000.0047
GLY 1000.0081
TYR 1000.0076
GLY 1000.0094
GLY 1000.0062
PHE 1000.0070
GLY 1010.0054
TYR 1020.0086
TRP 1030.0180
GLY 1040.0124
GLN 1050.0135
GLY 1060.0134
THR 1070.0110
LEU 1080.0104
VAL 1090.0094
THR 1100.0107
VAL 1110.0105
SER 1120.0191
GLU 1130.0161
ALA 1140.0110
LYS 1150.0283
THR 1160.0139
THR 1170.0139
PRO 1180.0109
PRO 1190.0168
SER 1200.0234
VAL 1210.0147
TYR 1220.0115
PRO 1230.0086
LEU 1240.0059
ALA 1250.0102
PRO 1260.0137
GLY 1270.0127
SER 1280.0052
ALA 1290.0303
ALA 1300.0141
GLN 1330.0294
THR 1340.0161
ASN 1350.0308
SER 1360.0130
MET 1370.0096
VAL 1380.0212
THR 1390.0191
LEU 1400.0124
GLY 1410.0060
CYS 1420.0102
LEU 1430.0137
VAL 1440.0198
LYS 1450.0203
GLY 1460.0149
TYR 1470.0142
PHE 1480.0048
PRO 1490.0040
GLU 1500.0086
PRO 1510.0134
VAL 1520.0131
THR 1530.0185
VAL 1540.0140
THR 1560.0102
TRP 1570.0092
ASN 1620.0134
SER 1630.0134
GLY 1640.0138
SER 1650.0202
LEU 1660.0138
SER 1670.0193
SER 1680.0261
GLY 1690.0290
VAL 1710.0161
HIS 1720.0066
THR 1730.0108
PHE 1740.0192
PRO 1750.0266
ALA 1760.0303
VAL 1770.0438
LEU 1780.0372
GLN 1790.0329
SER 1800.0436
ASP 1830.0240
LEU 1840.0097
TYR 1850.0184
THR 1860.0224
LEU 1870.0216
SER 1880.0185
SER 1890.0108
SER 1900.0126
VAL 1910.0172
THR 1920.0299
VAL 1930.0174
PRO 1940.0097
SER 1950.0145
SER 1960.0330
PRO 1980.0066
ARG 1990.0123
PRO 2000.0206
SER 2020.0224
GLU 2030.0201
THR 2040.0205
VAL 2050.0097
THR 2060.0119
CYS 2080.0107
ASN 2090.0111
VAL 2100.0134
ALA 2110.0150
HIS 2120.0097
PRO 2130.0137
ALA 2140.0156
SER 2150.0148
SER 2160.0137
THR 2170.0065
LYS 2180.0091
VAL 2190.0095
ASP 2200.0139
LYS 2210.0121
LYS 2220.0100
ILE 2230.0095
VAL 2260.0166
PRO 2270.0182
ARG 2280.0153
ASP 2320.0263
CYS 2330.0310

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.