Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
Some cleaning from time to time
Sorry for the inconvenience.

* 2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex *

CA strain for 2608162332391822803

--- normal mode 9 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
ILE 479 PHE 480 0.0002

PHE 480 ILE 481 -0.0002

ILE 481 SER 482 -0.0177

SER 482 ASP 483 -0.0003

ASP 483 ASP 484 -0.0001

ASP 484 LYS 485 0.0266

LYS 485 ASP 486 0.0002

ASP 486 SER 487 0.0005

SER 487 LEU 488 -0.0204

LEU 488 LYS 489 0.0001

LYS 489 CYS 490 -0.0000

CYS 490 PRO 491 -0.0059

PRO 491 CYS 492 0.0002

CYS 492 ASP 493 -0.0005

ASP 493 PRO 494 0.0278

PRO 494 GLU 495 -0.0002

GLU 495 MET 496 0.0001

MET 496 VAL 497 0.0390

VAL 497 SER 498 -0.0001

SER 498 GLN 499 -0.0001

GLN 499 SER 500 0.0117

SER 500 THR 501 0.0002

THR 501 CYS 502 0.0001

CYS 502 ARG 503 0.0059

ARG 503 PHE 504 -0.0003

PHE 504 PHE 505 0.0004

PHE 505 VAL 506 -0.0487

VAL 506 CYS 507 0.0000

CYS 507 LYS 508 0.0000

LYS 508 CYS 509 -0.0124

CYS 509 VAL 510 0.0003

VAL 510 GLU 511 0.0002

GLU 511 ARG 512 0.0047

ARG 512 SER 2 -0.0627

SER 2 VAL 3 0.0001

VAL 3 LEU 4 -0.0004

LEU 4 SER 5 -0.0793

SER 5 GLN 6 -0.0001

GLN 6 SER 7 0.0002

SER 7 PRO 8 -0.1291

PRO 8 ALA 9 -0.0001

ALA 9 ILE 10 0.0002

ILE 10 LEU 11 0.0340

LEU 11 SER 12 -0.0002

SER 12 ALA 13 0.0001

ALA 13 SER 14 -0.0048

SER 14 PRO 15 0.0001

PRO 15 GLY 16 -0.0000

GLY 16 GLU 17 -0.0178

GLU 17 LYS 18 -0.0001

LYS 18 VAL 19 -0.0000

VAL 19 THR 20 -0.0716

THR 20 MET 21 0.0003

MET 21 THR 22 -0.0002

THR 22 CYS 23 -0.0422

CYS 23 ARG 24 -0.0003

ARG 24 ALA 25 0.0001

ALA 25 ARG 26 -0.0255

ARG 26 SER 27 0.0001

SER 27 SER 29 -0.0057

SER 29 VAL 30 -0.0000

VAL 30 SER 31 0.0005

SER 31 TYR 32 -0.0072

TYR 32 MET 33 -0.0003

MET 33 HIS 34 -0.0002

HIS 34 TRP 35 0.0121

TRP 35 TYR 36 -0.0004

TYR 36 GLN 37 0.0001

GLN 37 GLN 38 0.0067

GLN 38 LYS 39 0.0003

LYS 39 SER 40 0.0000

SER 40 GLY 41 0.1153

GLY 41 SER 42 -0.0001

SER 42 SER 43 -0.0001

SER 43 PRO 44 -0.0000

PRO 44 LYS 45 0.0004

LYS 45 PRO 46 -0.0001

PRO 46 TRP 47 -0.0017

TRP 47 ILE 48 0.0000

ILE 48 HIS 49 -0.0000

HIS 49 ALA 50 0.0082

ALA 50 THR 51 -0.0004

THR 51 SER 52 -0.0000

SER 52 ASN 53 -0.0038

ASN 53 LEU 54 0.0002

LEU 54 ALA 55 0.0003

ALA 55 SER 56 -0.0086

SER 56 GLY 57 -0.0000

GLY 57 VAL 58 0.0003

VAL 58 PRO 59 0.0249

PRO 59 ALA 60 0.0002

ALA 60 ARG 61 -0.0001

ARG 61 PHE 62 0.0016

PHE 62 SER 63 0.0004

SER 63 GLY 64 -0.0005

GLY 64 SER 65 0.0269

SER 65 GLY 66 -0.0001

GLY 66 SER 67 0.0001

SER 67 GLY 68 0.0199

GLY 68 THR 69 -0.0004

THR 69 SER 70 0.0000

SER 70 TYR 71 -0.0046

TYR 71 SER 72 0.0000

SER 72 LEU 73 0.0001

LEU 73 THR 74 -0.0260

THR 74 ILE 75 0.0004

ILE 75 SER 76 -0.0001

SER 76 ARG 77 -0.0151

ARG 77 VAL 78 0.0004

VAL 78 GLU 79 -0.0002

GLU 79 ALA 80 -0.0526

ALA 80 GLU 81 0.0000

GLU 81 ASP 82 -0.0001

ASP 82 ALA 83 0.0191

ALA 83 ALA 84 -0.0004

ALA 84 THR 85 0.0005

THR 85 TYR 86 -0.0165

TYR 86 TYR 87 -0.0004

TYR 87 CYS 88 0.0003

CYS 88 GLN 89 -0.0509

GLN 89 GLN 90 -0.0002

GLN 90 TRP 91 -0.0001

TRP 91 SER 92 -0.0094

SER 92 SER 93 -0.0001

SER 93 HIS 94 0.0001

HIS 94 PRO 95 0.0116

PRO 95 PRO 96 0.0001

PRO 96 THR 97 -0.0000

THR 97 PHE 98 -0.0744

PHE 98 GLY 99 0.0002

GLY 99 SER 100 0.0004

SER 100 GLY 101 -0.0407

GLY 101 THR 102 0.0001

THR 102 LYS 103 -0.0000

LYS 103 LEU 104 -0.0551

LEU 104 GLU 105 0.0001

GLU 105 ILE 106 0.0002

ILE 106 LYS 107 -0.0183

LYS 107 ARG 108 0.0001

ARG 108 ALA 109 -0.0004

ALA 109 ASP 110 -0.0951

ASP 110 ALA 111 0.0004

ALA 111 ALA 112 -0.0004

ALA 112 PRO 113 -0.0962

PRO 113 THR 114 -0.0002

THR 114 VAL 115 0.0000

VAL 115 SER 116 -0.0984

SER 116 ILE 117 0.0004

ILE 117 PHE 118 0.0000

PHE 118 PRO 119 -0.0404

PRO 119 PRO 120 0.0000

PRO 120 SER 121 -0.0000

SER 121 SER 122 -0.0697

SER 122 GLU 123 0.0002

GLU 123 GLN 124 -0.0002

GLN 124 LEU 125 0.0438

LEU 125 THR 126 -0.0001

THR 126 SER 127 -0.0003

SER 127 GLY 128 -0.0056

GLY 128 GLY 129 -0.0001

GLY 129 ALA 130 -0.0001

ALA 130 SER 131 -0.0058

SER 131 VAL 132 0.0002

VAL 132 VAL 133 0.0000

VAL 133 CYS 134 -0.0493

CYS 134 PHE 135 -0.0003

PHE 135 LEU 136 0.0000

LEU 136 ASN 137 -0.0727

ASN 137 ASN 138 -0.0000

ASN 138 PHE 139 -0.0004

PHE 139 TYR 140 -0.0591

TYR 140 PRO 141 -0.0000

PRO 141 LYS 142 0.0002

LYS 142 ASP 143 0.0949

ASP 143 ILE 144 0.0003

ILE 144 ASN 145 -0.0001

ASN 145 VAL 146 0.0819

VAL 146 LYS 147 -0.0000

LYS 147 TRP 148 -0.0002

TRP 148 LYS 149 0.0650

LYS 149 ILE 150 0.0004

ILE 150 ASP 151 -0.0001

ASP 151 GLY 152 -0.0009

GLY 152 SER 153 0.0003

SER 153 GLU 154 -0.0003

GLU 154 ARG 155 0.0368

ARG 155 GLN 156 0.0004

GLN 156 ASN 157 -0.0005

ASN 157 GLY 158 0.0853

GLY 158 VAL 159 -0.0002

VAL 159 LEU 160 -0.0000

LEU 160 ASN 161 0.1566

ASN 161 SER 162 0.0002

SER 162 TRP 163 0.0003

TRP 163 THR 164 0.1586

THR 164 ASP 165 -0.0001

ASP 165 GLN 166 0.0003

GLN 166 ASP 167 -0.0249

ASP 167 SER 168 -0.0003

SER 168 LYS 169 0.0001

LYS 169 ASP 170 -0.0086

ASP 170 SER 171 -0.0000

SER 171 THR 172 0.0001

THR 172 TYR 173 0.0104

TYR 173 SER 174 0.0000

SER 174 MET 175 -0.0003

MET 175 SER 176 0.0350

SER 176 SER 177 -0.0000

SER 177 THR 178 -0.0003

THR 178 LEU 179 0.0593

LEU 179 THR 180 -0.0000

THR 180 LEU 181 0.0000

LEU 181 THR 182 0.0112

THR 182 LYS 183 0.0000

LYS 183 ASP 184 -0.0004

ASP 184 GLU 185 -0.0117

GLU 185 TYR 186 0.0001

TYR 186 GLU 187 -0.0003

GLU 187 ARG 188 0.0231

ARG 188 HIS 189 0.0002

HIS 189 ASN 190 0.0001

ASN 190 SER 191 -0.0205

SER 191 TYR 192 0.0001

TYR 192 THR 193 -0.0001

THR 193 CYS 194 -0.0284

CYS 194 GLU 195 0.0001

GLU 195 ALA 196 -0.0004

ALA 196 THR 197 0.0045

THR 197 HIS 198 -0.0003

HIS 198 LYS 199 0.0001

LYS 199 THR 200 -0.0137

THR 200 SER 201 0.0002

SER 201 THR 202 -0.0000

THR 202 SER 203 0.0079

SER 203 PRO 204 -0.0001

PRO 204 ILE 205 0.0001

ILE 205 VAL 206 -0.0604

VAL 206 LYS 207 -0.0003

LYS 207 SER 208 0.0003

SER 208 PHE 209 -0.0610

PHE 209 ASN 210 -0.0003

ASN 210 ARG 211 -0.0001

ARG 211 ASN 212 0.0158

ASN 212 GLU 213 0.0004

GLU 213 CYS 214 -0.0001

CYS 214 GLU 1 0.0828

GLU 1 VAL 2 -0.0004

VAL 2 GLN 3 -0.0001

GLN 3 LEU 4 0.0138

LEU 4 VAL 5 -0.0001

VAL 5 GLU 6 -0.0001

GLU 6 SER 7 -0.0002

SER 7 GLY 8 0.0003

GLY 8 GLY 9 -0.0001

GLY 9 GLY 10 0.4229

GLY 10 LEU 11 0.0003

LEU 11 VAL 12 -0.0002

VAL 12 LYS 13 0.0043

LYS 13 PRO 14 -0.0002

PRO 14 GLY 15 -0.0000

GLY 15 GLY 16 -0.0719

GLY 16 SER 17 0.0002

SER 17 LEU 18 -0.0003

LEU 18 LYS 19 0.0527

LYS 19 LEU 20 -0.0003

LEU 20 SER 21 -0.0004

SER 21 CYS 22 -0.0536

CYS 22 ALA 23 -0.0001

ALA 23 ALA 24 0.0005

ALA 24 SER 25 -0.0097

SER 25 GLY 26 0.0002

GLY 26 PHE 27 -0.0001

PHE 27 ILE 28 -0.0064

ILE 28 PHE 29 -0.0001

PHE 29 SER 30 -0.0001

SER 30 ASP 31 0.0142

ASP 31 TYR 32 0.0002

TYR 32 TYR 33 -0.0003

TYR 33 MET 34 0.0697

MET 34 TYR 35 0.0000

TYR 35 TRP 36 0.0003

TRP 36 VAL 37 -0.0156

VAL 37 ARG 38 0.0002

ARG 38 GLN 39 -0.0003

GLN 39 THR 40 -0.0106

THR 40 PRO 41 -0.0001

PRO 41 GLU 42 -0.0001

GLU 42 LYS 43 -0.0340

LYS 43 ARG 44 -0.0001

ARG 44 LEU 45 0.0003

LEU 45 GLU 46 -0.0633

GLU 46 TRP 47 0.0002

TRP 47 VAL 48 0.0002

VAL 48 ALA 49 -0.0103

ALA 49 THR 50 -0.0003

THR 50 ILE 51 0.0000

ILE 51 SER 52 0.0354

SER 52 ASP 52 0.0002

ASP 52 GLY 53 0.0001

GLY 53 ASN 54 0.0001

ASN 54 SER 55 0.0308

SER 55 TYR 56 -0.0002

TYR 56 THR 57 -0.0002

THR 57 TYR 58 0.0032

TYR 58 TYR 59 -0.0000

TYR 59 VAL 60 0.0002

VAL 60 ASP 61 -0.0131

ASP 61 SER 62 -0.0001

SER 62 VAL 63 0.0000

VAL 63 LYS 64 -0.0298

LYS 64 GLY 65 -0.0002

GLY 65 ARG 66 0.0001

ARG 66 PHE 67 -0.0248

PHE 67 THR 68 -0.0004

THR 68 ILE 69 0.0002

ILE 69 SER 70 -0.0340

SER 70 ARG 71 0.0002

ARG 71 ASP 72 0.0002

ASP 72 ASN 73 0.0063

ASN 73 ALA 74 -0.0001

ALA 74 LYS 75 0.0001

LYS 75 ASN 76 -0.0016

ASN 76 ASN 77 -0.0000

ASN 77 LEU 78 0.0001

LEU 78 TYR 79 -0.0042

TYR 79 LEU 80 -0.0003

LEU 80 GLN 81 0.0005

GLN 81 MET 82 -0.0172

MET 82 SER 82 0.0002

SER 82 SER 82 -0.0001

SER 82 LEU 82 -0.0000

LEU 82 LYS 83 -0.0001

LYS 83 SER 84 0.0001

SER 84 GLU 85 -0.0201

GLU 85 ASP 86 -0.0002

ASP 86 THR 87 0.0000

THR 87 ALA 88 -0.0322

ALA 88 ILE 89 0.0001

ILE 89 TYR 90 0.0004

TYR 90 TYR 91 0.0147

TYR 91 CYS 92 0.0003

CYS 92 ALA 93 -0.0001

ALA 93 ARG 94 0.0511

ARG 94 ASP 95 0.0005

ASP 95 GLY 96 0.0001

GLY 96 PRO 97 0.0145

PRO 97 THR 98 0.0002

THR 98 ASP 99 -0.0002

ASP 99 SER 100 0.0017

SER 100 SER 100 -0.0002

SER 100 GLY 100 0.0001

GLY 100 TYR 100 0.0001

TYR 100 GLY 100 0.0001

GLY 100 GLY 100 -0.0002

GLY 100 PHE 100 0.0005

PHE 100 GLY 101 -0.0004

GLY 101 TYR 102 -0.0003

TYR 102 TRP 103 0.0005

TRP 103 GLY 104 0.0001

GLY 104 GLN 105 0.0004

GLN 105 GLY 106 0.0293

GLY 106 THR 107 -0.0001

THR 107 LEU 108 -0.0003

LEU 108 VAL 109 0.0167

VAL 109 THR 110 -0.0001

THR 110 VAL 111 0.0001

VAL 111 SER 112 0.0447

SER 112 GLU 113 0.0002

GLU 113 ALA 114 0.0002

ALA 114 LYS 115 -0.0016

LYS 115 THR 116 0.0001

THR 116 THR 117 0.0001

THR 117 PRO 118 0.0727

PRO 118 PRO 119 0.0004

PRO 119 SER 120 -0.0002

SER 120 VAL 121 0.1684

VAL 121 TYR 122 -0.0003

TYR 122 PRO 123 -0.0001

PRO 123 LEU 124 0.0488

LEU 124 ALA 125 0.0003

ALA 125 PRO 126 -0.0001

PRO 126 GLY 127 -0.0460

GLY 127 SER 128 -0.0002

SER 128 ALA 129 0.0000

ALA 129 ALA 130 -0.0581

ALA 130 GLN 133 -0.0014

GLN 133 THR 134 0.0001

THR 134 ASN 135 0.0001

ASN 135 SER 136 0.0087

SER 136 MET 137 -0.0004

MET 137 VAL 138 0.0004

VAL 138 THR 139 0.0187

THR 139 LEU 140 -0.0000

LEU 140 GLY 141 0.0003

GLY 141 CYS 142 0.0750

CYS 142 LEU 143 -0.0003

LEU 143 VAL 144 -0.0003

VAL 144 LYS 145 -0.0163

LYS 145 GLY 146 0.0002

GLY 146 TYR 147 -0.0001

TYR 147 PHE 148 0.3320

PHE 148 PRO 149 0.0002

PRO 149 GLU 150 0.0005

GLU 150 PRO 151 -0.1474

PRO 151 VAL 152 -0.0002

VAL 152 THR 153 0.0002

THR 153 VAL 154 -0.0852

VAL 154 THR 156 -0.0410

THR 156 TRP 157 -0.0002

TRP 157 ASN 162 -0.0143

ASN 162 SER 163 0.0004

SER 163 GLY 164 -0.0002

GLY 164 SER 165 -0.0137

SER 165 LEU 166 -0.0001

LEU 166 SER 167 -0.0003

SER 167 SER 168 -0.0073

SER 168 GLY 169 -0.0004

GLY 169 VAL 171 -0.0199

VAL 171 HIS 172 0.0000

HIS 172 THR 173 -0.0004

THR 173 PHE 174 -0.0536

PHE 174 PRO 175 0.0004

PRO 175 ALA 176 -0.0003

ALA 176 VAL 177 -0.0162

VAL 177 LEU 178 0.0004

LEU 178 GLN 179 -0.0003

GLN 179 SER 180 0.0404

SER 180 ASP 183 0.1363

ASP 183 LEU 184 -0.0003

LEU 184 TYR 185 0.0002

TYR 185 THR 186 0.1430

THR 186 LEU 187 0.0000

LEU 187 SER 188 -0.0003

SER 188 SER 189 0.0131

SER 189 SER 190 -0.0003

SER 190 VAL 191 -0.0002

VAL 191 THR 192 -0.0301

THR 192 VAL 193 0.0001

VAL 193 PRO 194 0.0000

PRO 194 SER 195 -0.0218

SER 195 SER 196 -0.0000

SER 196 PRO 198 0.0011

PRO 198 ARG 199 0.0001

ARG 199 PRO 200 0.0000

PRO 200 SER 202 0.0025

SER 202 GLU 203 0.0000

GLU 203 THR 204 0.0002

THR 204 VAL 205 -0.0118

VAL 205 THR 206 0.0001

THR 206 CYS 208 -0.0125

CYS 208 ASN 209 -0.0002

ASN 209 VAL 210 0.0004

VAL 210 ALA 211 -0.0650

ALA 211 HIS 212 0.0000

HIS 212 PRO 213 0.0002

PRO 213 ALA 214 -0.1142

ALA 214 SER 215 -0.0001

SER 215 SER 216 0.0003

SER 216 THR 217 -0.0022

THR 217 LYS 218 0.0003

LYS 218 VAL 219 -0.0000

VAL 219 ASP 220 0.0639

ASP 220 LYS 221 0.0004

LYS 221 LYS 222 -0.0001

LYS 222 ILE 223 0.0092

ILE 223 VAL 226 -0.0119

VAL 226 PRO 227 -0.0000

PRO 227 ARG 228 -0.0000

ARG 228 ASP 232 -0.0304

ASP 232 CYS 233 -0.0003

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.

Should you encounter any unexpected behaviour, please let us know. elNémo has been relocated. **Some cleaning from time to time** Sorry for the inconvenience.

*** 2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex ***

CA strain for 2608162332391822803

--- normal mode 9 ---

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
Some cleaning from time to time
Sorry for the inconvenience.

* 2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex *