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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 90  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0554
ILE 4790.0197
PHE 4800.0109
ILE 4810.0066
SER 4820.0153
ASP 4830.0136
ASP 4840.0184
LYS 4850.0110
ASP 4860.0183
SER 4870.0223
LEU 4880.0109
LYS 4890.0115
CYS 4900.0108
PRO 4910.0056
CYS 4920.0052
ASP 4930.0039
PRO 4940.0067
GLU 4950.0067
MET 4960.0056
VAL 4970.0071
SER 4980.0072
GLN 4990.0071
SER 5000.0135
THR 5010.0149
CYS 5020.0133
ARG 5030.0097
PHE 5040.0067
PHE 5050.0055
VAL 5060.0036
CYS 5070.0032
LYS 5080.0056
CYS 5090.0095
VAL 5100.0139
GLU 5110.0100
ARG 5120.0149
SER 20.0084
VAL 30.0117
LEU 40.0101
SER 50.0091
GLN 60.0098
SER 70.0112
PRO 80.0159
ALA 90.0183
ILE 100.0176
LEU 110.0144
SER 120.0152
ALA 130.0156
SER 140.0188
PRO 150.0155
GLY 160.0140
GLU 170.0122
LYS 180.0059
VAL 190.0025
THR 200.0044
MET 210.0065
THR 220.0079
CYS 230.0063
ARG 240.0089
ALA 250.0129
ARG 260.0124
SER 270.0307
SER 290.0160
VAL 300.0156
SER 310.0143
TYR 320.0084
MET 330.0063
HIS 340.0059
TRP 350.0059
TYR 360.0095
GLN 370.0119
GLN 380.0098
LYS 390.0182
SER 400.0252
GLY 410.0355
SER 420.0327
SER 430.0263
PRO 440.0184
LYS 450.0198
PRO 460.0127
TRP 470.0093
ILE 480.0038
HIS 490.0038
ALA 500.0073
THR 510.0041
SER 520.0052
ASN 530.0070
LEU 540.0047
ALA 550.0043
SER 560.0327
GLY 570.0163
VAL 580.0084
PRO 590.0114
ALA 600.0118
ARG 610.0074
PHE 620.0087
SER 630.0070
GLY 640.0053
SER 650.0048
GLY 660.0020
SER 670.0030
GLY 680.0091
THR 690.0152
SER 700.0109
TYR 710.0036
SER 720.0051
LEU 730.0057
THR 740.0091
ILE 750.0050
SER 760.0056
ARG 770.0097
VAL 780.0075
GLU 790.0134
ALA 800.0100
GLU 810.0087
ASP 820.0025
ALA 830.0074
ALA 840.0075
THR 850.0089
TYR 860.0068
TYR 870.0041
CYS 880.0040
GLN 890.0085
GLN 900.0087
TRP 910.0079
SER 920.0141
SER 930.0123
HIS 940.0078
PRO 950.0115
PRO 960.0085
THR 970.0078
PHE 980.0061
GLY 990.0077
SER 1000.0078
GLY 1010.0106
THR 1020.0122
LYS 1030.0128
LEU 1040.0100
GLU 1050.0103
ILE 1060.0112
LYS 1070.0144
ARG 1080.0162
ALA 1090.0261
ASP 1100.0197
ALA 1110.0226
ALA 1120.0208
PRO 1130.0116
THR 1140.0090
VAL 1150.0060
SER 1160.0128
ILE 1170.0137
PHE 1180.0168
PRO 1190.0179
PRO 1200.0161
SER 1210.0126
SER 1220.0263
GLU 1230.0249
GLN 1240.0223
LEU 1250.0192
THR 1260.0195
SER 1270.0200
GLY 1280.0177
GLY 1290.0175
ALA 1300.0141
SER 1310.0110
VAL 1320.0113
VAL 1330.0110
CYS 1340.0082
PHE 1350.0052
LEU 1360.0071
ASN 1370.0116
ASN 1380.0141
PHE 1390.0160
TYR 1400.0122
PRO 1410.0105
LYS 1420.0130
ASP 1430.0152
ILE 1440.0105
ASN 1450.0119
VAL 1460.0051
LYS 1470.0039
TRP 1480.0048
LYS 1490.0090
ILE 1500.0138
ASP 1510.0138
GLY 1520.0051
SER 1530.0255
GLU 1540.0311
ARG 1550.0064
GLN 1560.0139
ASN 1570.0277
GLY 1580.0107
VAL 1590.0114
LEU 1600.0119
ASN 1610.0170
SER 1620.0156
TRP 1630.0156
THR 1640.0189
ASP 1650.0144
GLN 1660.0116
ASP 1670.0162
SER 1680.0114
LYS 1690.0181
ASP 1700.0187
SER 1710.0154
THR 1720.0196
TYR 1730.0138
SER 1740.0133
MET 1750.0127
SER 1760.0098
SER 1770.0085
THR 1780.0083
LEU 1790.0067
THR 1800.0046
LEU 1810.0053
THR 1820.0064
LYS 1830.0050
ASP 1840.0119
GLU 1850.0162
TYR 1860.0085
GLU 1870.0107
ARG 1880.0227
HIS 1890.0163
ASN 1900.0083
SER 1910.0114
TYR 1920.0107
THR 1930.0083
CYS 1940.0051
GLU 1950.0086
ALA 1960.0137
THR 1970.0136
HIS 1980.0107
LYS 1990.0160
THR 2000.0138
SER 2010.0194
THR 2020.0306
SER 2030.0223
PRO 2040.0242
ILE 2050.0231
VAL 2060.0106
LYS 2070.0066
SER 2080.0105
PHE 2090.0153
ASN 2100.0125
ARG 2110.0123
ASN 2120.0174
GLU 2130.0193
CYS 2140.0168
GLU 10.0166
VAL 20.0150
GLN 30.0125
LEU 40.0093
VAL 50.0052
GLU 60.0053
SER 70.0118
GLY 80.0166
GLY 90.0147
GLY 100.0171
LEU 110.0159
VAL 120.0160
LYS 130.0095
PRO 140.0223
GLY 150.0222
GLY 160.0161
SER 170.0149
LEU 180.0127
LYS 190.0114
LEU 200.0118
SER 210.0124
CYS 220.0076
ALA 230.0083
ALA 240.0103
SER 250.0106
GLY 260.0115
PHE 270.0103
ILE 280.0067
PHE 290.0079
SER 300.0052
ASP 310.0047
TYR 320.0058
TYR 330.0068
MET 340.0043
TYR 350.0046
TRP 360.0052
VAL 370.0149
ARG 380.0150
GLN 390.0139
THR 400.0150
PRO 410.0122
GLU 420.0132
LYS 430.0094
ARG 440.0173
LEU 450.0204
GLU 460.0173
TRP 470.0149
VAL 480.0129
ALA 490.0101
THR 500.0099
ILE 510.0133
SER 520.0171
ASP 520.0136
GLY 530.0174
ASN 540.0243
SER 550.0200
TYR 560.0202
THR 570.0209
TYR 580.0104
TYR 590.0102
VAL 600.0155
ASP 610.0266
SER 620.0304
VAL 630.0173
LYS 640.0118
GLY 650.0105
ARG 660.0159
PHE 670.0119
THR 680.0110
ILE 690.0120
SER 700.0137
ARG 710.0117
ASP 720.0101
ASN 730.0099
ALA 740.0141
LYS 750.0166
ASN 760.0131
ASN 770.0130
LEU 780.0130
TYR 790.0123
LEU 800.0112
GLN 810.0078
MET 820.0163
SER 820.0184
SER 820.0189
LEU 820.0144
LYS 830.0154
SER 840.0142
GLU 850.0138
ASP 860.0077
THR 870.0090
ALA 880.0049
ILE 890.0052
TYR 900.0062
TYR 910.0142
CYS 920.0108
ALA 930.0110
ARG 940.0063
ASP 950.0040
GLY 960.0040
PRO 970.0159
THR 980.0284
ASP 990.0337
SER 1000.0065
SER 1000.0038
GLY 1000.0068
TYR 1000.0070
GLY 1000.0102
GLY 1000.0088
PHE 1000.0114
GLY 1010.0096
TYR 1020.0132
TRP 1030.0215
GLY 1040.0185
GLN 1050.0159
GLY 1060.0122
THR 1070.0057
LEU 1080.0052
VAL 1090.0153
THR 1100.0172
VAL 1110.0152
SER 1120.0220
GLU 1130.0172
ALA 1140.0056
LYS 1150.0070
THR 1160.0105
THR 1170.0112
PRO 1180.0056
PRO 1190.0063
SER 1200.0077
VAL 1210.0131
TYR 1220.0129
PRO 1230.0086
LEU 1240.0113
ALA 1250.0174
PRO 1260.0270
GLY 1270.0306
SER 1280.0280
ALA 1290.0452
ALA 1300.0554
GLN 1330.0443
THR 1340.0241
ASN 1350.0432
SER 1360.0313
MET 1370.0261
VAL 1380.0263
THR 1390.0213
LEU 1400.0189
GLY 1410.0155
CYS 1420.0066
LEU 1430.0084
VAL 1440.0079
LYS 1450.0061
GLY 1460.0092
TYR 1470.0117
PHE 1480.0101
PRO 1490.0100
GLU 1500.0091
PRO 1510.0177
VAL 1520.0107
THR 1530.0140
VAL 1540.0104
THR 1560.0110
TRP 1570.0061
ASN 1620.0127
SER 1630.0185
GLY 1640.0238
SER 1650.0137
LEU 1660.0160
SER 1670.0198
SER 1680.0350
GLY 1690.0273
VAL 1710.0148
HIS 1720.0078
THR 1730.0133
PHE 1740.0158
PRO 1750.0238
ALA 1760.0221
VAL 1770.0219
LEU 1780.0192
GLN 1790.0154
SER 1800.0151
ASP 1830.0211
LEU 1840.0160
TYR 1850.0093
THR 1860.0079
LEU 1870.0091
SER 1880.0084
SER 1890.0159
SER 1900.0176
VAL 1910.0200
THR 1920.0337
VAL 1930.0337
PRO 1940.0293
SER 1950.0261
SER 1960.0131
PRO 1980.0046
ARG 1990.0048
PRO 2000.0027
SER 2020.0120
GLU 2030.0171
THR 2040.0189
VAL 2050.0101
THR 2060.0112
CYS 2080.0105
ASN 2090.0125
VAL 2100.0114
ALA 2110.0050
HIS 2120.0057
PRO 2130.0259
ALA 2140.0307
SER 2150.0320
SER 2160.0378
THR 2170.0191
LYS 2180.0216
VAL 2190.0347
ASP 2200.0250
LYS 2210.0180
LYS 2220.0160
ILE 2230.0078
VAL 2260.0323
PRO 2270.0384
ARG 2280.0278
ASP 2320.0314
CYS 2330.0207

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.