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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 91  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0596
ILE 4790.0034
PHE 4800.0048
ILE 4810.0058
SER 4820.0103
ASP 4830.0095
ASP 4840.0074
LYS 4850.0023
ASP 4860.0048
SER 4870.0067
LEU 4880.0031
LYS 4890.0065
CYS 4900.0030
PRO 4910.0038
CYS 4920.0036
ASP 4930.0019
PRO 4940.0017
GLU 4950.0029
MET 4960.0034
VAL 4970.0082
SER 4980.0040
GLN 4990.0020
SER 5000.0109
THR 5010.0061
CYS 5020.0054
ARG 5030.0044
PHE 5040.0079
PHE 5050.0066
VAL 5060.0024
CYS 5070.0033
LYS 5080.0031
CYS 5090.0109
VAL 5100.0108
GLU 5110.0095
ARG 5120.0167
SER 20.0144
VAL 30.0122
LEU 40.0121
SER 50.0192
GLN 60.0208
SER 70.0226
PRO 80.0284
ALA 90.0327
ILE 100.0268
LEU 110.0196
SER 120.0121
ALA 130.0169
SER 140.0238
PRO 150.0175
GLY 160.0175
GLU 170.0243
LYS 180.0240
VAL 190.0285
THR 200.0110
MET 210.0121
THR 220.0100
CYS 230.0089
ARG 240.0036
ALA 250.0062
ARG 260.0092
SER 270.0157
SER 290.0187
VAL 300.0189
SER 310.0180
TYR 320.0105
MET 330.0102
HIS 340.0103
TRP 350.0073
TYR 360.0078
GLN 370.0084
GLN 380.0216
LYS 390.0202
SER 400.0197
GLY 410.0279
SER 420.0241
SER 430.0193
PRO 440.0150
LYS 450.0105
PRO 460.0124
TRP 470.0143
ILE 480.0133
HIS 490.0089
ALA 500.0119
THR 510.0166
SER 520.0177
ASN 530.0212
LEU 540.0248
ALA 550.0214
SER 560.0326
GLY 570.0330
VAL 580.0331
PRO 590.0314
ALA 600.0277
ARG 610.0214
PHE 620.0218
SER 630.0173
GLY 640.0153
SER 650.0185
GLY 660.0179
SER 670.0185
GLY 680.0170
THR 690.0131
SER 700.0120
TYR 710.0103
SER 720.0110
LEU 730.0114
THR 740.0182
ILE 750.0146
SER 760.0106
ARG 770.0134
VAL 780.0138
GLU 790.0115
ALA 800.0157
GLU 810.0165
ASP 820.0159
ALA 830.0153
ALA 840.0174
THR 850.0189
TYR 860.0121
TYR 870.0132
CYS 880.0125
GLN 890.0086
GLN 900.0089
TRP 910.0090
SER 920.0149
SER 930.0137
HIS 940.0121
PRO 950.0132
PRO 960.0105
THR 970.0095
PHE 980.0091
GLY 990.0163
SER 1000.0195
GLY 1010.0257
THR 1020.0254
LYS 1030.0230
LEU 1040.0143
GLU 1050.0100
ILE 1060.0137
LYS 1070.0228
ARG 1080.0267
ALA 1090.0301
ASP 1100.0145
ALA 1110.0245
ALA 1120.0298
PRO 1130.0256
THR 1140.0266
VAL 1150.0275
SER 1160.0152
ILE 1170.0118
PHE 1180.0059
PRO 1190.0053
PRO 1200.0072
SER 1210.0061
SER 1220.0115
GLU 1230.0081
GLN 1240.0064
LEU 1250.0091
THR 1260.0073
SER 1270.0034
GLY 1280.0094
GLY 1290.0092
ALA 1300.0099
SER 1310.0069
VAL 1320.0053
VAL 1330.0070
CYS 1340.0133
PHE 1350.0137
LEU 1360.0175
ASN 1370.0128
ASN 1380.0095
PHE 1390.0104
TYR 1400.0108
PRO 1410.0060
LYS 1420.0036
ASP 1430.0106
ILE 1440.0151
ASN 1450.0296
VAL 1460.0166
LYS 1470.0100
TRP 1480.0093
LYS 1490.0048
ILE 1500.0049
ASP 1510.0045
GLY 1520.0141
SER 1530.0217
GLU 1540.0269
ARG 1550.0074
GLN 1560.0118
ASN 1570.0250
GLY 1580.0259
VAL 1590.0227
LEU 1600.0232
ASN 1610.0285
SER 1620.0274
TRP 1630.0292
THR 1640.0270
ASP 1650.0232
GLN 1660.0210
ASP 1670.0339
SER 1680.0267
LYS 1690.0342
ASP 1700.0202
SER 1710.0155
THR 1720.0189
TYR 1730.0166
SER 1740.0166
MET 1750.0177
SER 1760.0221
SER 1770.0189
THR 1780.0153
LEU 1790.0111
THR 1800.0112
LEU 1810.0140
THR 1820.0122
LYS 1830.0088
ASP 1840.0073
GLU 1850.0109
TYR 1860.0111
GLU 1870.0114
ARG 1880.0128
HIS 1890.0106
ASN 1900.0076
SER 1910.0044
TYR 1920.0086
THR 1930.0107
CYS 1940.0153
GLU 1950.0196
ALA 1960.0301
THR 1970.0368
HIS 1980.0258
LYS 1990.0166
THR 2000.0303
SER 2010.0339
THR 2020.0325
SER 2030.0596
PRO 2040.0499
ILE 2050.0282
VAL 2060.0207
LYS 2070.0151
SER 2080.0166
PHE 2090.0117
ASN 2100.0088
ARG 2110.0099
ASN 2120.0154
GLU 2130.0134
CYS 2140.0114
GLU 10.0176
VAL 20.0076
GLN 30.0226
LEU 40.0133
VAL 50.0154
GLU 60.0140
SER 70.0124
GLY 80.0090
GLY 90.0073
GLY 100.0053
LEU 110.0083
VAL 120.0104
LYS 130.0159
PRO 140.0098
GLY 150.0181
GLY 160.0082
SER 170.0062
LEU 180.0077
LYS 190.0062
LEU 200.0037
SER 210.0031
CYS 220.0139
ALA 230.0149
ALA 240.0140
SER 250.0251
GLY 260.0226
PHE 270.0230
ILE 280.0275
PHE 290.0207
SER 300.0142
ASP 310.0113
TYR 320.0098
TYR 330.0090
MET 340.0052
TYR 350.0054
TRP 360.0057
VAL 370.0081
ARG 380.0095
GLN 390.0075
THR 400.0164
PRO 410.0271
GLU 420.0086
LYS 430.0131
ARG 440.0154
LEU 450.0070
GLU 460.0112
TRP 470.0105
VAL 480.0122
ALA 490.0125
THR 500.0120
ILE 510.0140
SER 520.0108
ASP 520.0085
GLY 530.0111
ASN 540.0188
SER 550.0194
TYR 560.0164
THR 570.0180
TYR 580.0097
TYR 590.0108
VAL 600.0163
ASP 610.0293
SER 620.0332
VAL 630.0152
LYS 640.0029
GLY 650.0095
ARG 660.0092
PHE 670.0126
THR 680.0149
ILE 690.0178
SER 700.0157
ARG 710.0124
ASP 720.0100
ASN 730.0097
ALA 740.0097
LYS 750.0137
ASN 760.0104
ASN 770.0111
LEU 780.0124
TYR 790.0110
LEU 800.0120
GLN 810.0120
MET 820.0112
SER 820.0059
SER 820.0041
LEU 820.0064
LYS 830.0124
SER 840.0155
GLU 850.0191
ASP 860.0157
THR 870.0102
ALA 880.0081
ILE 890.0095
TYR 900.0094
TYR 910.0088
CYS 920.0050
ALA 930.0046
ARG 940.0079
ASP 950.0076
GLY 960.0098
PRO 970.0172
THR 980.0227
ASP 990.0238
SER 1000.0082
SER 1000.0064
GLY 1000.0052
TYR 1000.0049
GLY 1000.0036
GLY 1000.0040
PHE 1000.0046
GLY 1010.0062
TYR 1020.0074
TRP 1030.0109
GLY 1040.0135
GLN 1050.0180
GLY 1060.0124
THR 1070.0110
LEU 1080.0075
VAL 1090.0047
THR 1100.0039
VAL 1110.0058
SER 1120.0089
GLU 1130.0150
ALA 1140.0103
LYS 1150.0162
THR 1160.0086
THR 1170.0077
PRO 1180.0076
PRO 1190.0039
SER 1200.0060
VAL 1210.0048
TYR 1220.0041
PRO 1230.0045
LEU 1240.0031
ALA 1250.0065
PRO 1260.0084
GLY 1270.0046
SER 1280.0203
ALA 1290.0470
ALA 1300.0167
GLN 1330.0339
THR 1340.0205
ASN 1350.0072
SER 1360.0133
MET 1370.0083
VAL 1380.0182
THR 1390.0122
LEU 1400.0074
GLY 1410.0016
CYS 1420.0067
LEU 1430.0079
VAL 1440.0091
LYS 1450.0118
GLY 1460.0095
TYR 1470.0033
PHE 1480.0082
PRO 1490.0109
GLU 1500.0109
PRO 1510.0061
VAL 1520.0059
THR 1530.0102
VAL 1540.0097
THR 1560.0050
TRP 1570.0019
ASN 1620.0056
SER 1630.0114
GLY 1640.0147
SER 1650.0208
LEU 1660.0148
SER 1670.0178
SER 1680.0072
GLY 1690.0089
VAL 1710.0049
HIS 1720.0097
THR 1730.0178
PHE 1740.0214
PRO 1750.0264
ALA 1760.0254
VAL 1770.0207
LEU 1780.0075
GLN 1790.0330
SER 1800.0415
ASP 1830.0286
LEU 1840.0161
TYR 1850.0037
THR 1860.0150
LEU 1870.0169
SER 1880.0196
SER 1890.0087
SER 1900.0034
VAL 1910.0043
THR 1920.0150
VAL 1930.0114
PRO 1940.0080
SER 1950.0086
SER 1960.0141
PRO 1980.0038
ARG 1990.0109
PRO 2000.0133
SER 2020.0121
GLU 2030.0061
THR 2040.0064
VAL 2050.0077
THR 2060.0071
CYS 2080.0018
ASN 2090.0021
VAL 2100.0027
ALA 2110.0093
HIS 2120.0086
PRO 2130.0120
ALA 2140.0105
SER 2150.0128
SER 2160.0119
THR 2170.0086
LYS 2180.0086
VAL 2190.0053
ASP 2200.0053
LYS 2210.0049
LYS 2220.0054
ILE 2230.0098
VAL 2260.0128
PRO 2270.0172
ARG 2280.0147
ASP 2320.0219
CYS 2330.0292

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.