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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 92  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0855
ILE 4790.0149
PHE 4800.0101
ILE 4810.0164
SER 4820.0158
ASP 4830.0128
ASP 4840.0117
LYS 4850.0104
ASP 4860.0072
SER 4870.0091
LEU 4880.0069
LYS 4890.0149
CYS 4900.0132
PRO 4910.0126
CYS 4920.0149
ASP 4930.0145
PRO 4940.0126
GLU 4950.0071
MET 4960.0148
VAL 4970.0345
SER 4980.0256
GLN 4990.0237
SER 5000.0778
THR 5010.0286
CYS 5020.0316
ARG 5030.0060
PHE 5040.0100
PHE 5050.0049
VAL 5060.0052
CYS 5070.0105
LYS 5080.0133
CYS 5090.0146
VAL 5100.0129
GLU 5110.0096
ARG 5120.0164
SER 20.0070
VAL 30.0147
LEU 40.0164
SER 50.0195
GLN 60.0128
SER 70.0163
PRO 80.0300
ALA 90.0300
ILE 100.0358
LEU 110.0165
SER 120.0136
ALA 130.0164
SER 140.0110
PRO 150.0098
GLY 160.0073
GLU 170.0100
LYS 180.0123
VAL 190.0090
THR 200.0156
MET 210.0114
THR 220.0125
CYS 230.0121
ARG 240.0212
ALA 250.0244
ARG 260.0060
SER 270.0039
SER 290.0078
VAL 300.0110
SER 310.0152
TYR 320.0143
MET 330.0114
HIS 340.0109
TRP 350.0054
TYR 360.0033
GLN 370.0039
GLN 380.0096
LYS 390.0124
SER 400.0144
GLY 410.0202
SER 420.0099
SER 430.0037
PRO 440.0025
LYS 450.0045
PRO 460.0056
TRP 470.0068
ILE 480.0115
HIS 490.0136
ALA 500.0174
THR 510.0180
SER 520.0172
ASN 530.0228
LEU 540.0194
ALA 550.0173
SER 560.0279
GLY 570.0260
VAL 580.0188
PRO 590.0163
ALA 600.0174
ARG 610.0120
PHE 620.0085
SER 630.0101
GLY 640.0113
SER 650.0095
GLY 660.0086
SER 670.0148
GLY 680.0077
THR 690.0073
SER 700.0101
TYR 710.0038
SER 720.0027
LEU 730.0041
THR 740.0070
ILE 750.0084
SER 760.0119
ARG 770.0095
VAL 780.0050
GLU 790.0067
ALA 800.0080
GLU 810.0082
ASP 820.0090
ALA 830.0105
ALA 840.0090
THR 850.0095
TYR 860.0053
TYR 870.0051
CYS 880.0050
GLN 890.0085
GLN 900.0095
TRP 910.0101
SER 920.0104
SER 930.0087
HIS 940.0081
PRO 950.0100
PRO 960.0075
THR 970.0038
PHE 980.0069
GLY 990.0128
SER 1000.0154
GLY 1010.0107
THR 1020.0073
LYS 1030.0113
LEU 1040.0060
GLU 1050.0067
ILE 1060.0131
LYS 1070.0187
ARG 1080.0194
ALA 1090.0200
ASP 1100.0106
ALA 1110.0036
ALA 1120.0079
PRO 1130.0052
THR 1140.0061
VAL 1150.0046
SER 1160.0055
ILE 1170.0060
PHE 1180.0064
PRO 1190.0079
PRO 1200.0060
SER 1210.0049
SER 1220.0092
GLU 1230.0044
GLN 1240.0055
LEU 1250.0069
THR 1260.0059
SER 1270.0068
GLY 1280.0061
GLY 1290.0083
ALA 1300.0084
SER 1310.0048
VAL 1320.0052
VAL 1330.0054
CYS 1340.0080
PHE 1350.0087
LEU 1360.0099
ASN 1370.0116
ASN 1380.0082
PHE 1390.0058
TYR 1400.0056
PRO 1410.0102
LYS 1420.0089
ASP 1430.0127
ILE 1440.0135
ASN 1450.0181
VAL 1460.0065
LYS 1470.0073
TRP 1480.0082
LYS 1490.0129
ILE 1500.0113
ASP 1510.0113
GLY 1520.0157
SER 1530.0200
GLU 1540.0192
ARG 1550.0162
GLN 1560.0142
ASN 1570.0166
GLY 1580.0097
VAL 1590.0106
LEU 1600.0113
ASN 1610.0168
SER 1620.0154
TRP 1630.0140
THR 1640.0106
ASP 1650.0099
GLN 1660.0106
ASP 1670.0190
SER 1680.0222
LYS 1690.0206
ASP 1700.0146
SER 1710.0136
THR 1720.0101
TYR 1730.0046
SER 1740.0096
MET 1750.0133
SER 1760.0121
SER 1770.0105
THR 1780.0083
LEU 1790.0057
THR 1800.0044
LEU 1810.0054
THR 1820.0130
LYS 1830.0072
ASP 1840.0106
GLU 1850.0055
TYR 1860.0067
GLU 1870.0095
ARG 1880.0053
HIS 1890.0053
ASN 1900.0103
SER 1910.0084
TYR 1920.0116
THR 1930.0134
CYS 1940.0045
GLU 1950.0047
ALA 1960.0048
THR 1970.0061
HIS 1980.0068
LYS 1990.0079
THR 2000.0091
SER 2010.0086
THR 2020.0167
SER 2030.0138
PRO 2040.0108
ILE 2050.0117
VAL 2060.0113
LYS 2070.0107
SER 2080.0113
PHE 2090.0142
ASN 2100.0136
ARG 2110.0153
ASN 2120.0198
GLU 2130.0213
CYS 2140.0286
GLU 10.0097
VAL 20.0101
GLN 30.0142
LEU 40.0118
VAL 50.0110
GLU 60.0054
SER 70.0065
GLY 80.0109
GLY 90.0092
GLY 100.0142
LEU 110.0191
VAL 120.0214
LYS 130.0231
PRO 140.0183
GLY 150.0212
GLY 160.0162
SER 170.0115
LEU 180.0105
LYS 190.0150
LEU 200.0097
SER 210.0100
CYS 220.0049
ALA 230.0064
ALA 240.0089
SER 250.0144
GLY 260.0148
PHE 270.0230
ILE 280.0226
PHE 290.0132
SER 300.0136
ASP 310.0159
TYR 320.0158
TYR 330.0148
MET 340.0076
TYR 350.0073
TRP 360.0061
VAL 370.0053
ARG 380.0049
GLN 390.0109
THR 400.0232
PRO 410.0410
GLU 420.0477
LYS 430.0311
ARG 440.0208
LEU 450.0110
GLU 460.0031
TRP 470.0046
VAL 480.0050
ALA 490.0057
THR 500.0050
ILE 510.0096
SER 520.0072
ASP 520.0211
GLY 530.0387
ASN 540.0534
SER 550.0374
TYR 560.0303
THR 570.0153
TYR 580.0055
TYR 590.0070
VAL 600.0105
ASP 610.0287
SER 620.0194
VAL 630.0075
LYS 640.0118
GLY 650.0157
ARG 660.0112
PHE 670.0060
THR 680.0073
ILE 690.0093
SER 700.0145
ARG 710.0105
ASP 720.0031
ASN 730.0057
ALA 740.0089
LYS 750.0162
ASN 760.0060
ASN 770.0067
LEU 780.0091
TYR 790.0125
LEU 800.0113
GLN 810.0119
MET 820.0098
SER 820.0084
SER 820.0079
LEU 820.0087
LYS 830.0120
SER 840.0143
GLU 850.0205
ASP 860.0185
THR 870.0167
ALA 880.0111
ILE 890.0084
TYR 900.0085
TYR 910.0018
CYS 920.0034
ALA 930.0065
ARG 940.0177
ASP 950.0163
GLY 960.0150
PRO 970.0273
THR 980.0708
ASP 990.0855
SER 1000.0132
SER 1000.0112
GLY 1000.0123
TYR 1000.0112
GLY 1000.0141
GLY 1000.0121
PHE 1000.0117
GLY 1010.0100
TYR 1020.0100
TRP 1030.0082
GLY 1040.0106
GLN 1050.0121
GLY 1060.0092
THR 1070.0086
LEU 1080.0092
VAL 1090.0059
THR 1100.0124
VAL 1110.0135
SER 1120.0170
GLU 1130.0190
ALA 1140.0204
LYS 1150.0208
THR 1160.0146
THR 1170.0079
PRO 1180.0055
PRO 1190.0051
SER 1200.0033
VAL 1210.0038
TYR 1220.0034
PRO 1230.0060
LEU 1240.0021
ALA 1250.0056
PRO 1260.0085
GLY 1270.0189
SER 1280.0049
ALA 1290.0117
ALA 1300.0330
GLN 1330.0325
THR 1340.0081
ASN 1350.0176
SER 1360.0114
MET 1370.0170
VAL 1380.0226
THR 1390.0101
LEU 1400.0077
GLY 1410.0069
CYS 1420.0027
LEU 1430.0016
VAL 1440.0024
LYS 1450.0047
GLY 1460.0039
TYR 1470.0057
PHE 1480.0089
PRO 1490.0097
GLU 1500.0104
PRO 1510.0124
VAL 1520.0133
THR 1530.0194
VAL 1540.0107
THR 1560.0079
TRP 1570.0072
ASN 1620.0143
SER 1630.0083
GLY 1640.0171
SER 1650.0344
LEU 1660.0198
SER 1670.0126
SER 1680.0165
GLY 1690.0105
VAL 1710.0071
HIS 1720.0120
THR 1730.0133
PHE 1740.0150
PRO 1750.0139
ALA 1760.0109
VAL 1770.0065
LEU 1780.0055
GLN 1790.0159
SER 1800.0056
ASP 1830.0093
LEU 1840.0099
TYR 1850.0102
THR 1860.0076
LEU 1870.0085
SER 1880.0097
SER 1890.0109
SER 1900.0085
VAL 1910.0057
THR 1920.0210
VAL 1930.0207
PRO 1940.0204
SER 1950.0224
SER 1960.0248
PRO 1980.0211
ARG 1990.0128
PRO 2000.0087
SER 2020.0056
GLU 2030.0071
THR 2040.0123
VAL 2050.0105
THR 2060.0120
CYS 2080.0160
ASN 2090.0134
VAL 2100.0149
ALA 2110.0267
HIS 2120.0196
PRO 2130.0279
ALA 2140.0178
SER 2150.0232
SER 2160.0373
THR 2170.0238
LYS 2180.0256
VAL 2190.0246
ASP 2200.0173
LYS 2210.0161
LYS 2220.0157
ILE 2230.0045
VAL 2260.0051
PRO 2270.0089
ARG 2280.0106
ASP 2320.0134
CYS 2330.0186

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.