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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 93  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0631
ILE 4790.0185
PHE 4800.0130
ILE 4810.0120
SER 4820.0047
ASP 4830.0048
ASP 4840.0076
LYS 4850.0069
ASP 4860.0076
SER 4870.0073
LEU 4880.0057
LYS 4890.0057
CYS 4900.0098
PRO 4910.0105
CYS 4920.0110
ASP 4930.0111
PRO 4940.0076
GLU 4950.0090
MET 4960.0112
VAL 4970.0187
SER 4980.0180
GLN 4990.0192
SER 5000.0422
THR 5010.0280
CYS 5020.0220
ARG 5030.0073
PHE 5040.0075
PHE 5050.0075
VAL 5060.0050
CYS 5070.0062
LYS 5080.0084
CYS 5090.0113
VAL 5100.0120
GLU 5110.0132
ARG 5120.0210
SER 20.0129
VAL 30.0114
LEU 40.0103
SER 50.0090
GLN 60.0117
SER 70.0166
PRO 80.0205
ALA 90.0182
ILE 100.0178
LEU 110.0138
SER 120.0018
ALA 130.0098
SER 140.0233
PRO 150.0275
GLY 160.0290
GLU 170.0153
LYS 180.0041
VAL 190.0144
THR 200.0165
MET 210.0135
THR 220.0101
CYS 230.0075
ARG 240.0080
ALA 250.0087
ARG 260.0088
SER 270.0048
SER 290.0104
VAL 300.0127
SER 310.0157
TYR 320.0102
MET 330.0110
HIS 340.0106
TRP 350.0083
TYR 360.0084
GLN 370.0079
GLN 380.0049
LYS 390.0047
SER 400.0094
GLY 410.0240
SER 420.0167
SER 430.0077
PRO 440.0101
LYS 450.0125
PRO 460.0181
TRP 470.0185
ILE 480.0176
HIS 490.0150
ALA 500.0163
THR 510.0188
SER 520.0244
ASN 530.0324
LEU 540.0326
ALA 550.0383
SER 560.0631
GLY 570.0593
VAL 580.0361
PRO 590.0238
ALA 600.0211
ARG 610.0134
PHE 620.0052
SER 630.0046
GLY 640.0062
SER 650.0156
GLY 660.0143
SER 670.0173
GLY 680.0149
THR 690.0094
SER 700.0092
TYR 710.0100
SER 720.0087
LEU 730.0097
THR 740.0136
ILE 750.0112
SER 760.0131
ARG 770.0121
VAL 780.0108
GLU 790.0193
ALA 800.0122
GLU 810.0152
ASP 820.0123
ALA 830.0081
ALA 840.0092
THR 850.0104
TYR 860.0044
TYR 870.0049
CYS 880.0053
GLN 890.0033
GLN 900.0043
TRP 910.0070
SER 920.0102
SER 930.0097
HIS 940.0104
PRO 950.0081
PRO 960.0061
THR 970.0042
PHE 980.0049
GLY 990.0077
SER 1000.0095
GLY 1010.0122
THR 1020.0129
LYS 1030.0136
LEU 1040.0127
GLU 1050.0094
ILE 1060.0111
LYS 1070.0144
ARG 1080.0130
ALA 1090.0163
ASP 1100.0158
ALA 1110.0175
ALA 1120.0192
PRO 1130.0168
THR 1140.0183
VAL 1150.0169
SER 1160.0097
ILE 1170.0084
PHE 1180.0072
PRO 1190.0045
PRO 1200.0026
SER 1210.0055
SER 1220.0074
GLU 1230.0079
GLN 1240.0056
LEU 1250.0034
THR 1260.0032
SER 1270.0103
GLY 1280.0096
GLY 1290.0068
ALA 1300.0023
SER 1310.0034
VAL 1320.0039
VAL 1330.0042
CYS 1340.0097
PHE 1350.0099
LEU 1360.0140
ASN 1370.0151
ASN 1380.0131
PHE 1390.0131
TYR 1400.0080
PRO 1410.0055
LYS 1420.0104
ASP 1430.0136
ILE 1440.0131
ASN 1450.0181
VAL 1460.0100
LYS 1470.0102
TRP 1480.0107
LYS 1490.0081
ILE 1500.0057
ASP 1510.0075
GLY 1520.0134
SER 1530.0143
GLU 1540.0164
ARG 1550.0153
GLN 1560.0089
ASN 1570.0117
GLY 1580.0060
VAL 1590.0115
LEU 1600.0136
ASN 1610.0087
SER 1620.0075
TRP 1630.0099
THR 1640.0056
ASP 1650.0056
GLN 1660.0055
ASP 1670.0114
SER 1680.0098
LYS 1690.0237
ASP 1700.0123
SER 1710.0081
THR 1720.0070
TYR 1730.0073
SER 1740.0097
MET 1750.0122
SER 1760.0066
SER 1770.0057
THR 1780.0040
LEU 1790.0059
THR 1800.0052
LEU 1810.0053
THR 1820.0084
LYS 1830.0053
ASP 1840.0032
GLU 1850.0056
TYR 1860.0039
GLU 1870.0087
ARG 1880.0114
HIS 1890.0106
ASN 1900.0102
SER 1910.0026
TYR 1920.0018
THR 1930.0038
CYS 1940.0094
GLU 1950.0070
ALA 1960.0055
THR 1970.0048
HIS 1980.0028
LYS 1990.0087
THR 2000.0174
SER 2010.0130
THR 2020.0337
SER 2030.0438
PRO 2040.0245
ILE 2050.0156
VAL 2060.0060
LYS 2070.0075
SER 2080.0059
PHE 2090.0082
ASN 2100.0102
ARG 2110.0097
ASN 2120.0194
GLU 2130.0179
CYS 2140.0251
GLU 10.0262
VAL 20.0177
GLN 30.0094
LEU 40.0089
VAL 50.0108
GLU 60.0115
SER 70.0107
GLY 80.0105
GLY 90.0113
GLY 100.0047
LEU 110.0118
VAL 120.0125
LYS 130.0105
PRO 140.0205
GLY 150.0216
GLY 160.0164
SER 170.0123
LEU 180.0079
LYS 190.0052
LEU 200.0053
SER 210.0060
CYS 220.0118
ALA 230.0139
ALA 240.0136
SER 250.0206
GLY 260.0197
PHE 270.0172
ILE 280.0135
PHE 290.0100
SER 300.0103
ASP 310.0071
TYR 320.0070
TYR 330.0072
MET 340.0042
TYR 350.0047
TRP 360.0051
VAL 370.0040
ARG 380.0075
GLN 390.0111
THR 400.0174
PRO 410.0253
GLU 420.0316
LYS 430.0215
ARG 440.0160
LEU 450.0099
GLU 460.0061
TRP 470.0027
VAL 480.0038
ALA 490.0043
THR 500.0040
ILE 510.0044
SER 520.0033
ASP 520.0123
GLY 530.0226
ASN 540.0293
SER 550.0176
TYR 560.0148
THR 570.0080
TYR 580.0045
TYR 590.0027
VAL 600.0017
ASP 610.0100
SER 620.0099
VAL 630.0034
LYS 640.0049
GLY 650.0076
ARG 660.0071
PHE 670.0032
THR 680.0033
ILE 690.0046
SER 700.0087
ARG 710.0055
ASP 720.0093
ASN 730.0107
ALA 740.0252
LYS 750.0120
ASN 760.0085
ASN 770.0089
LEU 780.0078
TYR 790.0076
LEU 800.0070
GLN 810.0073
MET 820.0080
SER 820.0093
SER 820.0101
LEU 820.0092
LYS 830.0094
SER 840.0089
GLU 850.0043
ASP 860.0058
THR 870.0089
ALA 880.0103
ILE 890.0092
TYR 900.0073
TYR 910.0060
CYS 920.0046
ALA 930.0017
ARG 940.0057
ASP 950.0079
GLY 960.0131
PRO 970.0427
THR 980.0527
ASP 990.0517
SER 1000.0136
SER 1000.0125
GLY 1000.0137
TYR 1000.0103
GLY 1000.0078
GLY 1000.0026
PHE 1000.0035
GLY 1010.0088
TYR 1020.0123
TRP 1030.0029
GLY 1040.0032
GLN 1050.0045
GLY 1060.0093
THR 1070.0092
LEU 1080.0086
VAL 1090.0032
THR 1100.0061
VAL 1110.0105
SER 1120.0171
GLU 1130.0185
ALA 1140.0143
LYS 1150.0628
THR 1160.0341
THR 1170.0192
PRO 1180.0210
PRO 1190.0083
SER 1200.0076
VAL 1210.0069
TYR 1220.0064
PRO 1230.0058
LEU 1240.0091
ALA 1250.0121
PRO 1260.0140
GLY 1270.0205
SER 1280.0201
ALA 1290.0216
ALA 1300.0153
GLN 1330.0169
THR 1340.0199
ASN 1350.0137
SER 1360.0126
MET 1370.0106
VAL 1380.0074
THR 1390.0041
LEU 1400.0065
GLY 1410.0070
CYS 1420.0068
LEU 1430.0067
VAL 1440.0078
LYS 1450.0080
GLY 1460.0023
TYR 1470.0028
PHE 1480.0142
PRO 1490.0138
GLU 1500.0076
PRO 1510.0133
VAL 1520.0133
THR 1530.0205
VAL 1540.0112
THR 1560.0061
TRP 1570.0052
ASN 1620.0141
SER 1630.0119
GLY 1640.0097
SER 1650.0135
LEU 1660.0073
SER 1670.0105
SER 1680.0236
GLY 1690.0084
VAL 1710.0085
HIS 1720.0039
THR 1730.0051
PHE 1740.0130
PRO 1750.0201
ALA 1760.0210
VAL 1770.0362
LEU 1780.0339
GLN 1790.0440
SER 1800.0553
ASP 1830.0218
LEU 1840.0148
TYR 1850.0156
THR 1860.0161
LEU 1870.0148
SER 1880.0132
SER 1890.0044
SER 1900.0052
VAL 1910.0061
THR 1920.0092
VAL 1930.0099
PRO 1940.0103
SER 1950.0064
SER 1960.0186
PRO 1980.0173
ARG 1990.0159
PRO 2000.0126
SER 2020.0120
GLU 2030.0107
THR 2040.0155
VAL 2050.0126
THR 2060.0109
CYS 2080.0100
ASN 2090.0120
VAL 2100.0122
ALA 2110.0238
HIS 2120.0204
PRO 2130.0323
ALA 2140.0160
SER 2150.0352
SER 2160.0459
THR 2170.0194
LYS 2180.0394
VAL 2190.0328
ASP 2200.0130
LYS 2210.0095
LYS 2220.0088
ILE 2230.0075
VAL 2260.0208
PRO 2270.0214
ARG 2280.0195
ASP 2320.0038
CYS 2330.0101

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.