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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 94  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0744
ILE 4790.0168
PHE 4800.0103
ILE 4810.0129
SER 4820.0041
ASP 4830.0047
ASP 4840.0028
LYS 4850.0028
ASP 4860.0053
SER 4870.0089
LEU 4880.0040
LYS 4890.0091
CYS 4900.0048
PRO 4910.0064
CYS 4920.0077
ASP 4930.0076
PRO 4940.0067
GLU 4950.0045
MET 4960.0081
VAL 4970.0136
SER 4980.0106
GLN 4990.0085
SER 5000.0240
THR 5010.0109
CYS 5020.0109
ARG 5030.0062
PHE 5040.0020
PHE 5050.0006
VAL 5060.0048
CYS 5070.0060
LYS 5080.0058
CYS 5090.0058
VAL 5100.0072
GLU 5110.0094
ARG 5120.0256
SER 20.0073
VAL 30.0107
LEU 40.0120
SER 50.0134
GLN 60.0119
SER 70.0147
PRO 80.0172
ALA 90.0228
ILE 100.0185
LEU 110.0164
SER 120.0125
ALA 130.0095
SER 140.0094
PRO 150.0117
GLY 160.0119
GLU 170.0120
LYS 180.0169
VAL 190.0250
THR 200.0233
MET 210.0192
THR 220.0170
CYS 230.0113
ARG 240.0132
ALA 250.0204
ARG 260.0183
SER 270.0307
SER 290.0222
VAL 300.0146
SER 310.0196
TYR 320.0134
MET 330.0110
HIS 340.0090
TRP 350.0146
TYR 360.0139
GLN 370.0165
GLN 380.0234
LYS 390.0259
SER 400.0296
GLY 410.0744
SER 420.0578
SER 430.0324
PRO 440.0291
LYS 450.0278
PRO 460.0257
TRP 470.0137
ILE 480.0139
HIS 490.0121
ALA 500.0160
THR 510.0183
SER 520.0229
ASN 530.0157
LEU 540.0141
ALA 550.0138
SER 560.0265
GLY 570.0207
VAL 580.0134
PRO 590.0167
ALA 600.0228
ARG 610.0158
PHE 620.0100
SER 630.0155
GLY 640.0207
SER 650.0265
GLY 660.0260
SER 670.0253
GLY 680.0060
THR 690.0158
SER 700.0233
TYR 710.0130
SER 720.0140
LEU 730.0146
THR 740.0202
ILE 750.0119
SER 760.0068
ARG 770.0033
VAL 780.0046
GLU 790.0114
ALA 800.0075
GLU 810.0078
ASP 820.0075
ALA 830.0070
ALA 840.0075
THR 850.0114
TYR 860.0134
TYR 870.0129
CYS 880.0121
GLN 890.0073
GLN 900.0087
TRP 910.0077
SER 920.0097
SER 930.0102
HIS 940.0088
PRO 950.0103
PRO 960.0086
THR 970.0100
PHE 980.0171
GLY 990.0248
SER 1000.0279
GLY 1010.0290
THR 1020.0204
LYS 1030.0156
LEU 1040.0134
GLU 1050.0132
ILE 1060.0107
LYS 1070.0186
ARG 1080.0179
ALA 1090.0186
ASP 1100.0075
ALA 1110.0059
ALA 1120.0044
PRO 1130.0050
THR 1140.0057
VAL 1150.0083
SER 1160.0056
ILE 1170.0075
PHE 1180.0110
PRO 1190.0145
PRO 1200.0148
SER 1210.0143
SER 1220.0167
GLU 1230.0141
GLN 1240.0134
LEU 1250.0060
THR 1260.0135
SER 1270.0211
GLY 1280.0169
GLY 1290.0144
ALA 1300.0109
SER 1310.0117
VAL 1320.0103
VAL 1330.0085
CYS 1340.0038
PHE 1350.0041
LEU 1360.0061
ASN 1370.0055
ASN 1380.0053
PHE 1390.0046
TYR 1400.0052
PRO 1410.0074
LYS 1420.0078
ASP 1430.0101
ILE 1440.0111
ASN 1450.0131
VAL 1460.0101
LYS 1470.0057
TRP 1480.0033
LYS 1490.0033
ILE 1500.0067
ASP 1510.0105
GLY 1520.0115
SER 1530.0087
GLU 1540.0063
ARG 1550.0053
GLN 1560.0058
ASN 1570.0111
GLY 1580.0166
VAL 1590.0170
LEU 1600.0192
ASN 1610.0134
SER 1620.0119
TRP 1630.0143
THR 1640.0139
ASP 1650.0116
GLN 1660.0109
ASP 1670.0107
SER 1680.0125
LYS 1690.0143
ASP 1700.0149
SER 1710.0132
THR 1720.0104
TYR 1730.0088
SER 1740.0096
MET 1750.0096
SER 1760.0098
SER 1770.0094
THR 1780.0081
LEU 1790.0042
THR 1800.0053
LEU 1810.0036
THR 1820.0088
LYS 1830.0053
ASP 1840.0122
GLU 1850.0072
TYR 1860.0041
GLU 1870.0063
ARG 1880.0109
HIS 1890.0098
ASN 1900.0086
SER 1910.0029
TYR 1920.0034
THR 1930.0044
CYS 1940.0061
GLU 1950.0083
ALA 1960.0138
THR 1970.0084
HIS 1980.0112
LYS 1990.0174
THR 2000.0220
SER 2010.0201
THR 2020.0172
SER 2030.0373
PRO 2040.0249
ILE 2050.0336
VAL 2060.0181
LYS 2070.0117
SER 2080.0051
PHE 2090.0039
ASN 2100.0056
ARG 2110.0062
ASN 2120.0163
GLU 2130.0145
CYS 2140.0133
GLU 10.0208
VAL 20.0114
GLN 30.0213
LEU 40.0175
VAL 50.0264
GLU 60.0259
SER 70.0310
GLY 80.0226
GLY 90.0172
GLY 100.0076
LEU 110.0068
VAL 120.0085
LYS 130.0143
PRO 140.0235
GLY 150.0388
GLY 160.0258
SER 170.0196
LEU 180.0171
LYS 190.0136
LEU 200.0101
SER 210.0102
CYS 220.0102
ALA 230.0133
ALA 240.0105
SER 250.0259
GLY 260.0248
PHE 270.0265
ILE 280.0143
PHE 290.0091
SER 300.0061
ASP 310.0102
TYR 320.0081
TYR 330.0068
MET 340.0087
TYR 350.0081
TRP 360.0066
VAL 370.0060
ARG 380.0061
GLN 390.0082
THR 400.0213
PRO 410.0305
GLU 420.0384
LYS 430.0220
ARG 440.0339
LEU 450.0211
GLU 460.0150
TRP 470.0102
VAL 480.0136
ALA 490.0107
THR 500.0105
ILE 510.0108
SER 520.0024
ASP 520.0146
GLY 530.0265
ASN 540.0360
SER 550.0220
TYR 560.0139
THR 570.0075
TYR 580.0049
TYR 590.0077
VAL 600.0119
ASP 610.0220
SER 620.0191
VAL 630.0044
LYS 640.0077
GLY 650.0117
ARG 660.0103
PHE 670.0094
THR 680.0111
ILE 690.0124
SER 700.0125
ARG 710.0096
ASP 720.0126
ASN 730.0216
ALA 740.0448
LYS 750.0327
ASN 760.0058
ASN 770.0079
LEU 780.0084
TYR 790.0083
LEU 800.0072
GLN 810.0085
MET 820.0130
SER 820.0174
SER 820.0183
LEU 820.0121
LYS 830.0103
SER 840.0054
GLU 850.0070
ASP 860.0090
THR 870.0133
ALA 880.0067
ILE 890.0072
TYR 900.0081
TYR 910.0150
CYS 920.0083
ALA 930.0085
ARG 940.0110
ASP 950.0136
GLY 960.0117
PRO 970.0202
THR 980.0421
ASP 990.0407
SER 1000.0071
SER 1000.0096
GLY 1000.0132
TYR 1000.0128
GLY 1000.0140
GLY 1000.0102
PHE 1000.0083
GLY 1010.0059
TYR 1020.0056
TRP 1030.0208
GLY 1040.0234
GLN 1050.0336
GLY 1060.0281
THR 1070.0214
LEU 1080.0123
VAL 1090.0032
THR 1100.0036
VAL 1110.0025
SER 1120.0109
GLU 1130.0150
ALA 1140.0135
LYS 1150.0290
THR 1160.0155
THR 1170.0106
PRO 1180.0056
PRO 1190.0047
SER 1200.0047
VAL 1210.0094
TYR 1220.0089
PRO 1230.0072
LEU 1240.0066
ALA 1250.0123
PRO 1260.0177
GLY 1270.0083
SER 1280.0114
ALA 1290.0285
ALA 1300.0170
GLN 1330.0321
THR 1340.0148
ASN 1350.0169
SER 1360.0129
MET 1370.0149
VAL 1380.0240
THR 1390.0152
LEU 1400.0113
GLY 1410.0058
CYS 1420.0074
LEU 1430.0087
VAL 1440.0094
LYS 1450.0051
GLY 1460.0017
TYR 1470.0047
PHE 1480.0085
PRO 1490.0100
GLU 1500.0100
PRO 1510.0083
VAL 1520.0064
THR 1530.0103
VAL 1540.0106
THR 1560.0080
TRP 1570.0061
ASN 1620.0085
SER 1630.0123
GLY 1640.0152
SER 1650.0258
LEU 1660.0167
SER 1670.0157
SER 1680.0126
GLY 1690.0178
VAL 1710.0064
HIS 1720.0076
THR 1730.0108
PHE 1740.0108
PRO 1750.0109
ALA 1760.0105
VAL 1770.0124
LEU 1780.0091
GLN 1790.0217
SER 1800.0344
ASP 1830.0267
LEU 1840.0148
TYR 1850.0073
THR 1860.0080
LEU 1870.0095
SER 1880.0117
SER 1890.0095
SER 1900.0086
VAL 1910.0103
THR 1920.0254
VAL 1930.0187
PRO 1940.0131
SER 1950.0090
SER 1960.0261
PRO 1980.0043
ARG 1990.0082
PRO 2000.0140
SER 2020.0158
GLU 2030.0090
THR 2040.0104
VAL 2050.0099
THR 2060.0096
CYS 2080.0068
ASN 2090.0074
VAL 2100.0081
ALA 2110.0025
HIS 2120.0022
PRO 2130.0074
ALA 2140.0100
SER 2150.0117
SER 2160.0144
THR 2170.0105
LYS 2180.0107
VAL 2190.0153
ASP 2200.0161
LYS 2210.0100
LYS 2220.0115
ILE 2230.0096
VAL 2260.0218
PRO 2270.0250
ARG 2280.0202
ASP 2320.0171
CYS 2330.0311

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.