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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 95  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0636
ILE 4790.0154
PHE 4800.0161
ILE 4810.0108
SER 4820.0054
ASP 4830.0163
ASP 4840.0247
LYS 4850.0186
ASP 4860.0234
SER 4870.0302
LEU 4880.0192
LYS 4890.0248
CYS 4900.0212
PRO 4910.0166
CYS 4920.0145
ASP 4930.0132
PRO 4940.0093
GLU 4950.0070
MET 4960.0047
VAL 4970.0298
SER 4980.0279
GLN 4990.0300
SER 5000.0636
THR 5010.0411
CYS 5020.0306
ARG 5030.0108
PHE 5040.0085
PHE 5050.0086
VAL 5060.0044
CYS 5070.0086
LYS 5080.0123
CYS 5090.0207
VAL 5100.0230
GLU 5110.0287
ARG 5120.0402
SER 20.0189
VAL 30.0162
LEU 40.0115
SER 50.0045
GLN 60.0118
SER 70.0191
PRO 80.0443
ALA 90.0454
ILE 100.0396
LEU 110.0152
SER 120.0080
ALA 130.0064
SER 140.0227
PRO 150.0186
GLY 160.0318
GLU 170.0267
LYS 180.0096
VAL 190.0135
THR 200.0168
MET 210.0155
THR 220.0156
CYS 230.0130
ARG 240.0124
ALA 250.0081
ARG 260.0153
SER 270.0091
SER 290.0136
VAL 300.0163
SER 310.0242
TYR 320.0083
MET 330.0071
HIS 340.0059
TRP 350.0058
TYR 360.0062
GLN 370.0076
GLN 380.0076
LYS 390.0097
SER 400.0125
GLY 410.0245
SER 420.0191
SER 430.0138
PRO 440.0120
LYS 450.0106
PRO 460.0105
TRP 470.0083
ILE 480.0081
HIS 490.0073
ALA 500.0140
THR 510.0146
SER 520.0144
ASN 530.0164
LEU 540.0150
ALA 550.0204
SER 560.0430
GLY 570.0434
VAL 580.0257
PRO 590.0181
ALA 600.0204
ARG 610.0128
PHE 620.0087
SER 630.0059
GLY 640.0086
SER 650.0200
GLY 660.0318
SER 670.0450
GLY 680.0316
THR 690.0257
SER 700.0310
TYR 710.0159
SER 720.0110
LEU 730.0057
THR 740.0064
ILE 750.0039
SER 760.0063
ARG 770.0187
VAL 780.0089
GLU 790.0063
ALA 800.0067
GLU 810.0093
ASP 820.0079
ALA 830.0086
ALA 840.0049
THR 850.0047
TYR 860.0012
TYR 870.0020
CYS 880.0033
GLN 890.0046
GLN 900.0102
TRP 910.0139
SER 920.0162
SER 930.0182
HIS 940.0208
PRO 950.0188
PRO 960.0144
THR 970.0110
PHE 980.0085
GLY 990.0128
SER 1000.0137
GLY 1010.0197
THR 1020.0192
LYS 1030.0182
LEU 1040.0096
GLU 1050.0105
ILE 1060.0129
LYS 1070.0177
ARG 1080.0157
ALA 1090.0185
ASP 1100.0073
ALA 1110.0048
ALA 1120.0134
PRO 1130.0131
THR 1140.0137
VAL 1150.0122
SER 1160.0053
ILE 1170.0042
PHE 1180.0105
PRO 1190.0143
PRO 1200.0154
SER 1210.0148
SER 1220.0174
GLU 1230.0122
GLN 1240.0116
LEU 1250.0111
THR 1260.0161
SER 1270.0185
GLY 1280.0138
GLY 1290.0164
ALA 1300.0191
SER 1310.0153
VAL 1320.0125
VAL 1330.0092
CYS 1340.0079
PHE 1350.0091
LEU 1360.0102
ASN 1370.0048
ASN 1380.0024
PHE 1390.0054
TYR 1400.0068
PRO 1410.0114
LYS 1420.0087
ASP 1430.0114
ILE 1440.0133
ASN 1450.0245
VAL 1460.0124
LYS 1470.0072
TRP 1480.0066
LYS 1490.0083
ILE 1500.0107
ASP 1510.0135
GLY 1520.0149
SER 1530.0251
GLU 1540.0171
ARG 1550.0041
GLN 1560.0055
ASN 1570.0073
GLY 1580.0138
VAL 1590.0105
LEU 1600.0131
ASN 1610.0159
SER 1620.0132
TRP 1630.0082
THR 1640.0080
ASP 1650.0142
GLN 1660.0169
ASP 1670.0289
SER 1680.0230
LYS 1690.0170
ASP 1700.0165
SER 1710.0182
THR 1720.0156
TYR 1730.0099
SER 1740.0033
MET 1750.0077
SER 1760.0131
SER 1770.0102
THR 1780.0065
LEU 1790.0120
THR 1800.0152
LEU 1810.0170
THR 1820.0184
LYS 1830.0029
ASP 1840.0151
GLU 1850.0024
TYR 1860.0116
GLU 1870.0146
ARG 1880.0116
HIS 1890.0111
ASN 1900.0132
SER 1910.0097
TYR 1920.0129
THR 1930.0154
CYS 1940.0071
GLU 1950.0071
ALA 1960.0130
THR 1970.0184
HIS 1980.0139
LYS 1990.0117
THR 2000.0254
SER 2010.0147
THR 2020.0244
SER 2030.0343
PRO 2040.0206
ILE 2050.0097
VAL 2060.0134
LYS 2070.0095
SER 2080.0155
PHE 2090.0093
ASN 2100.0086
ARG 2110.0148
ASN 2120.0265
GLU 2130.0143
CYS 2140.0081
GLU 10.0500
VAL 20.0427
GLN 30.0365
LEU 40.0235
VAL 50.0224
GLU 60.0224
SER 70.0109
GLY 80.0079
GLY 90.0106
GLY 100.0056
LEU 110.0014
VAL 120.0030
LYS 130.0102
PRO 140.0172
GLY 150.0279
GLY 160.0146
SER 170.0078
LEU 180.0119
LYS 190.0116
LEU 200.0109
SER 210.0091
CYS 220.0203
ALA 230.0204
ALA 240.0186
SER 250.0368
GLY 260.0368
PHE 270.0349
ILE 280.0112
PHE 290.0096
SER 300.0058
ASP 310.0035
TYR 320.0058
TYR 330.0085
MET 340.0049
TYR 350.0041
TRP 360.0044
VAL 370.0089
ARG 380.0062
GLN 390.0069
THR 400.0092
PRO 410.0100
GLU 420.0223
LYS 430.0181
ARG 440.0166
LEU 450.0119
GLU 460.0081
TRP 470.0072
VAL 480.0052
ALA 490.0053
THR 500.0079
ILE 510.0116
SER 520.0155
ASP 520.0192
GLY 530.0222
ASN 540.0213
SER 550.0239
TYR 560.0206
THR 570.0183
TYR 580.0107
TYR 590.0103
VAL 600.0115
ASP 610.0150
SER 620.0203
VAL 630.0188
LYS 640.0168
GLY 650.0160
ARG 660.0166
PHE 670.0152
THR 680.0143
ILE 690.0150
SER 700.0209
ARG 710.0164
ASP 720.0175
ASN 730.0297
ALA 740.0409
LYS 750.0238
ASN 760.0154
ASN 770.0098
LEU 780.0079
TYR 790.0139
LEU 800.0123
GLN 810.0108
MET 820.0075
SER 820.0075
SER 820.0128
LEU 820.0107
LYS 830.0165
SER 840.0167
GLU 850.0137
ASP 860.0144
THR 870.0134
ALA 880.0045
ILE 890.0046
TYR 900.0055
TYR 910.0143
CYS 920.0149
ALA 930.0126
ARG 940.0099
ASP 950.0081
GLY 960.0064
PRO 970.0060
THR 980.0118
ASP 990.0118
SER 1000.0053
SER 1000.0066
GLY 1000.0077
TYR 1000.0089
GLY 1000.0108
GLY 1000.0098
PHE 1000.0103
GLY 1010.0086
TYR 1020.0100
TRP 1030.0168
GLY 1040.0180
GLN 1050.0155
GLY 1060.0107
THR 1070.0061
LEU 1080.0012
VAL 1090.0081
THR 1100.0079
VAL 1110.0071
SER 1120.0090
GLU 1130.0101
ALA 1140.0085
LYS 1150.0260
THR 1160.0117
THR 1170.0027
PRO 1180.0059
PRO 1190.0025
SER 1200.0041
VAL 1210.0085
TYR 1220.0076
PRO 1230.0055
LEU 1240.0066
ALA 1250.0144
PRO 1260.0207
GLY 1270.0174
SER 1280.0136
ALA 1290.0220
ALA 1300.0176
GLN 1330.0090
THR 1340.0085
ASN 1350.0127
SER 1360.0121
MET 1370.0133
VAL 1380.0151
THR 1390.0109
LEU 1400.0099
GLY 1410.0067
CYS 1420.0051
LEU 1430.0059
VAL 1440.0069
LYS 1450.0037
GLY 1460.0040
TYR 1470.0040
PHE 1480.0102
PRO 1490.0097
GLU 1500.0067
PRO 1510.0055
VAL 1520.0058
THR 1530.0126
VAL 1540.0103
THR 1560.0041
TRP 1570.0035
ASN 1620.0019
SER 1630.0063
GLY 1640.0094
SER 1650.0206
LEU 1660.0125
SER 1670.0141
SER 1680.0066
GLY 1690.0131
VAL 1710.0056
HIS 1720.0023
THR 1730.0056
PHE 1740.0083
PRO 1750.0094
ALA 1760.0095
VAL 1770.0161
LEU 1780.0190
GLN 1790.0270
SER 1800.0412
ASP 1830.0186
LEU 1840.0137
TYR 1850.0096
THR 1860.0065
LEU 1870.0075
SER 1880.0107
SER 1890.0063
SER 1900.0074
VAL 1910.0096
THR 1920.0184
VAL 1930.0140
PRO 1940.0101
SER 1950.0058
SER 1960.0139
PRO 1980.0029
ARG 1990.0109
PRO 2000.0151
SER 2020.0132
GLU 2030.0109
THR 2040.0164
VAL 2050.0100
THR 2060.0054
CYS 2080.0034
ASN 2090.0050
VAL 2100.0072
ALA 2110.0090
HIS 2120.0050
PRO 2130.0128
ALA 2140.0086
SER 2150.0132
SER 2160.0144
THR 2170.0038
LYS 2180.0125
VAL 2190.0163
ASP 2200.0099
LYS 2210.0030
LYS 2220.0066
ILE 2230.0114
VAL 2260.0284
PRO 2270.0305
ARG 2280.0235
ASP 2320.0065
CYS 2330.0198

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.