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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 96  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0683
ILE 4790.0477
PHE 4800.0296
ILE 4810.0295
SER 4820.0121
ASP 4830.0141
ASP 4840.0154
LYS 4850.0110
ASP 4860.0128
SER 4870.0119
LEU 4880.0101
LYS 4890.0060
CYS 4900.0045
PRO 4910.0065
CYS 4920.0028
ASP 4930.0045
PRO 4940.0069
GLU 4950.0070
MET 4960.0099
VAL 4970.0271
SER 4980.0175
GLN 4990.0133
SER 5000.0413
THR 5010.0124
CYS 5020.0230
ARG 5030.0090
PHE 5040.0154
PHE 5050.0153
VAL 5060.0074
CYS 5070.0064
LYS 5080.0043
CYS 5090.0079
VAL 5100.0121
GLU 5110.0115
ARG 5120.0215
SER 20.0110
VAL 30.0181
LEU 40.0178
SER 50.0193
GLN 60.0123
SER 70.0126
PRO 80.0171
ALA 90.0148
ILE 100.0188
LEU 110.0133
SER 120.0082
ALA 130.0070
SER 140.0044
PRO 150.0043
GLY 160.0106
GLU 170.0124
LYS 180.0149
VAL 190.0178
THR 200.0073
MET 210.0032
THR 220.0029
CYS 230.0109
ARG 240.0190
ALA 250.0276
ARG 260.0233
SER 270.0106
SER 290.0123
VAL 300.0122
SER 310.0130
TYR 320.0038
MET 330.0045
HIS 340.0065
TRP 350.0071
TYR 360.0080
GLN 370.0097
GLN 380.0048
LYS 390.0077
SER 400.0138
GLY 410.0138
SER 420.0054
SER 430.0103
PRO 440.0075
LYS 450.0110
PRO 460.0110
TRP 470.0094
ILE 480.0084
HIS 490.0075
ALA 500.0044
THR 510.0073
SER 520.0111
ASN 530.0158
LEU 540.0137
ALA 550.0153
SER 560.0315
GLY 570.0284
VAL 580.0167
PRO 590.0157
ALA 600.0168
ARG 610.0083
PHE 620.0111
SER 630.0113
GLY 640.0108
SER 650.0164
GLY 660.0130
SER 670.0134
GLY 680.0142
THR 690.0120
SER 700.0100
TYR 710.0072
SER 720.0082
LEU 730.0093
THR 740.0124
ILE 750.0106
SER 760.0082
ARG 770.0108
VAL 780.0078
GLU 790.0043
ALA 800.0074
GLU 810.0078
ASP 820.0076
ALA 830.0041
ALA 840.0020
THR 850.0020
TYR 860.0047
TYR 870.0072
CYS 880.0103
GLN 890.0086
GLN 900.0065
TRP 910.0054
SER 920.0040
SER 930.0050
HIS 940.0068
PRO 950.0079
PRO 960.0090
THR 970.0103
PHE 980.0098
GLY 990.0121
SER 1000.0121
GLY 1010.0097
THR 1020.0084
LYS 1030.0089
LEU 1040.0105
GLU 1050.0079
ILE 1060.0053
LYS 1070.0051
ARG 1080.0101
ALA 1090.0141
ASP 1100.0113
ALA 1110.0053
ALA 1120.0068
PRO 1130.0041
THR 1140.0073
VAL 1150.0067
SER 1160.0111
ILE 1170.0099
PHE 1180.0080
PRO 1190.0141
PRO 1200.0126
SER 1210.0110
SER 1220.0201
GLU 1230.0152
GLN 1240.0101
LEU 1250.0152
THR 1260.0142
SER 1270.0141
GLY 1280.0131
GLY 1290.0117
ALA 1300.0088
SER 1310.0054
VAL 1320.0071
VAL 1330.0085
CYS 1340.0095
PHE 1350.0099
LEU 1360.0098
ASN 1370.0065
ASN 1380.0025
PHE 1390.0035
TYR 1400.0073
PRO 1410.0096
LYS 1420.0083
ASP 1430.0090
ILE 1440.0097
ASN 1450.0179
VAL 1460.0106
LYS 1470.0132
TRP 1480.0157
LYS 1490.0137
ILE 1500.0103
ASP 1510.0144
GLY 1520.0218
SER 1530.0202
GLU 1540.0124
ARG 1550.0198
GLN 1560.0208
ASN 1570.0237
GLY 1580.0107
VAL 1590.0149
LEU 1600.0175
ASN 1610.0180
SER 1620.0153
TRP 1630.0128
THR 1640.0067
ASP 1650.0056
GLN 1660.0054
ASP 1670.0159
SER 1680.0111
LYS 1690.0210
ASP 1700.0118
SER 1710.0092
THR 1720.0095
TYR 1730.0040
SER 1740.0052
MET 1750.0107
SER 1760.0132
SER 1770.0120
THR 1780.0115
LEU 1790.0082
THR 1800.0026
LEU 1810.0028
THR 1820.0066
LYS 1830.0069
ASP 1840.0107
GLU 1850.0086
TYR 1860.0071
GLU 1870.0094
ARG 1880.0110
HIS 1890.0073
ASN 1900.0095
SER 1910.0097
TYR 1920.0096
THR 1930.0106
CYS 1940.0086
GLU 1950.0074
ALA 1960.0047
THR 1970.0062
HIS 1980.0043
LYS 1990.0093
THR 2000.0128
SER 2010.0080
THR 2020.0193
SER 2030.0235
PRO 2040.0124
ILE 2050.0125
VAL 2060.0155
LYS 2070.0118
SER 2080.0129
PHE 2090.0161
ASN 2100.0149
ARG 2110.0165
ASN 2120.0252
GLU 2130.0288
CYS 2140.0408
GLU 10.0459
VAL 20.0238
GLN 30.0255
LEU 40.0238
VAL 50.0275
GLU 60.0218
SER 70.0106
GLY 80.0089
GLY 90.0125
GLY 100.0126
LEU 110.0184
VAL 120.0241
LYS 130.0164
PRO 140.0180
GLY 150.0251
GLY 160.0180
SER 170.0159
LEU 180.0161
LYS 190.0126
LEU 200.0060
SER 210.0038
CYS 220.0204
ALA 230.0273
ALA 240.0283
SER 250.0534
GLY 260.0502
PHE 270.0574
ILE 280.0299
PHE 290.0187
SER 300.0164
ASP 310.0229
TYR 320.0121
TYR 330.0034
MET 340.0028
TYR 350.0003
TRP 360.0031
VAL 370.0091
ARG 380.0108
GLN 390.0101
THR 400.0207
PRO 410.0245
GLU 420.0287
LYS 430.0166
ARG 440.0141
LEU 450.0056
GLU 460.0063
TRP 470.0053
VAL 480.0062
ALA 490.0080
THR 500.0075
ILE 510.0089
SER 520.0072
ASP 520.0161
GLY 530.0303
ASN 540.0455
SER 550.0323
TYR 560.0291
THR 570.0217
TYR 580.0142
TYR 590.0121
VAL 600.0124
ASP 610.0330
SER 620.0280
VAL 630.0109
LYS 640.0120
GLY 650.0130
ARG 660.0197
PHE 670.0167
THR 680.0152
ILE 690.0152
SER 700.0185
ARG 710.0120
ASP 720.0160
ASN 730.0149
ALA 740.0605
LYS 750.0400
ASN 760.0140
ASN 770.0053
LEU 780.0037
TYR 790.0125
LEU 800.0128
GLN 810.0145
MET 820.0207
SER 820.0211
SER 820.0191
LEU 820.0182
LYS 830.0199
SER 840.0236
GLU 850.0229
ASP 860.0178
THR 870.0153
ALA 880.0125
ILE 890.0124
TYR 900.0125
TYR 910.0099
CYS 920.0082
ALA 930.0069
ARG 940.0114
ASP 950.0120
GLY 960.0193
PRO 970.0519
THR 980.0683
ASP 990.0641
SER 1000.0081
SER 1000.0076
GLY 1000.0074
TYR 1000.0057
GLY 1000.0051
GLY 1000.0057
PHE 1000.0087
GLY 1010.0091
TYR 1020.0134
TRP 1030.0109
GLY 1040.0178
GLN 1050.0211
GLY 1060.0155
THR 1070.0134
LEU 1080.0134
VAL 1090.0068
THR 1100.0154
VAL 1110.0173
SER 1120.0213
GLU 1130.0175
ALA 1140.0062
LYS 1150.0192
THR 1160.0053
THR 1170.0049
PRO 1180.0050
PRO 1190.0073
SER 1200.0092
VAL 1210.0065
TYR 1220.0030
PRO 1230.0026
LEU 1240.0048
ALA 1250.0041
PRO 1260.0052
GLY 1270.0151
SER 1280.0185
ALA 1290.0196
ALA 1300.0128
GLN 1330.0195
THR 1340.0151
ASN 1350.0057
SER 1360.0048
MET 1370.0048
VAL 1380.0043
THR 1390.0039
LEU 1400.0027
GLY 1410.0033
CYS 1420.0028
LEU 1430.0033
VAL 1440.0071
LYS 1450.0075
GLY 1460.0073
TYR 1470.0078
PHE 1480.0030
PRO 1490.0022
GLU 1500.0020
PRO 1510.0059
VAL 1520.0080
THR 1530.0145
VAL 1540.0078
THR 1560.0068
TRP 1570.0031
ASN 1620.0036
SER 1630.0097
GLY 1640.0166
SER 1650.0197
LEU 1660.0086
SER 1670.0076
SER 1680.0134
GLY 1690.0075
VAL 1710.0048
HIS 1720.0080
THR 1730.0099
PHE 1740.0135
PRO 1750.0143
ALA 1760.0117
VAL 1770.0117
LEU 1780.0087
GLN 1790.0076
SER 1800.0131
ASP 1830.0085
LEU 1840.0086
TYR 1850.0083
THR 1860.0079
LEU 1870.0087
SER 1880.0088
SER 1890.0071
SER 1900.0059
VAL 1910.0043
THR 1920.0040
VAL 1930.0042
PRO 1940.0047
SER 1950.0010
SER 1960.0146
PRO 1980.0116
ARG 1990.0057
PRO 2000.0026
SER 2020.0037
GLU 2030.0061
THR 2040.0086
VAL 2050.0040
THR 2060.0050
CYS 2080.0111
ASN 2090.0104
VAL 2100.0129
ALA 2110.0193
HIS 2120.0118
PRO 2130.0147
ALA 2140.0080
SER 2150.0122
SER 2160.0196
THR 2170.0133
LYS 2180.0182
VAL 2190.0118
ASP 2200.0096
LYS 2210.0098
LYS 2220.0097
ILE 2230.0039
VAL 2260.0085
PRO 2270.0130
ARG 2280.0144
ASP 2320.0129
CYS 2330.0150

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.