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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 98  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1312
ILE 4790.0107
PHE 4800.0088
ILE 4810.0068
SER 4820.0027
ASP 4830.0027
ASP 4840.0058
LYS 4850.0045
ASP 4860.0065
SER 4870.0056
LEU 4880.0023
LYS 4890.0033
CYS 4900.0048
PRO 4910.0056
CYS 4920.0059
ASP 4930.0052
PRO 4940.0019
GLU 4950.0016
MET 4960.0028
VAL 4970.0058
SER 4980.0055
GLN 4990.0058
SER 5000.0058
THR 5010.0100
CYS 5020.0113
ARG 5030.0064
PHE 5040.0047
PHE 5050.0041
VAL 5060.0017
CYS 5070.0028
LYS 5080.0033
CYS 5090.0080
VAL 5100.0088
GLU 5110.0097
ARG 5120.0132
SER 20.0064
VAL 30.0062
LEU 40.0072
SER 50.0109
GLN 60.0097
SER 70.0114
PRO 80.0234
ALA 90.0182
ILE 100.0210
LEU 110.0119
SER 120.0068
ALA 130.0063
SER 140.0055
PRO 150.0072
GLY 160.0132
GLU 170.0133
LYS 180.0075
VAL 190.0070
THR 200.0116
MET 210.0103
THR 220.0104
CYS 230.0087
ARG 240.0084
ALA 250.0049
ARG 260.0057
SER 270.0177
SER 290.0087
VAL 300.0069
SER 310.0068
TYR 320.0041
MET 330.0040
HIS 340.0048
TRP 350.0030
TYR 360.0027
GLN 370.0037
GLN 380.0052
LYS 390.0083
SER 400.0100
GLY 410.0096
SER 420.0054
SER 430.0039
PRO 440.0042
LYS 450.0048
PRO 460.0057
TRP 470.0085
ILE 480.0074
HIS 490.0070
ALA 500.0082
THR 510.0082
SER 520.0113
ASN 530.0121
LEU 540.0113
ALA 550.0134
SER 560.0236
GLY 570.0222
VAL 580.0138
PRO 590.0079
ALA 600.0041
ARG 610.0042
PHE 620.0039
SER 630.0047
GLY 640.0071
SER 650.0085
GLY 660.0069
SER 670.0132
GLY 680.0146
THR 690.0088
SER 700.0077
TYR 710.0046
SER 720.0048
LEU 730.0064
THR 740.0060
ILE 750.0028
SER 760.0053
ARG 770.0103
VAL 780.0046
GLU 790.0036
ALA 800.0078
GLU 810.0078
ASP 820.0088
ALA 830.0087
ALA 840.0069
THR 850.0054
TYR 860.0037
TYR 870.0039
CYS 880.0048
GLN 890.0034
GLN 900.0036
TRP 910.0042
SER 920.0058
SER 930.0068
HIS 940.0075
PRO 950.0068
PRO 960.0060
THR 970.0056
PHE 980.0067
GLY 990.0072
SER 1000.0076
GLY 1010.0052
THR 1020.0038
LYS 1030.0032
LEU 1040.0051
GLU 1050.0035
ILE 1060.0051
LYS 1070.0049
ARG 1080.0052
ALA 1090.0070
ASP 1100.0065
ALA 1110.0037
ALA 1120.0063
PRO 1130.0060
THR 1140.0054
VAL 1150.0070
SER 1160.0044
ILE 1170.0047
PHE 1180.0057
PRO 1190.0091
PRO 1200.0064
SER 1210.0063
SER 1220.0228
GLU 1230.0218
GLN 1240.0133
LEU 1250.0180
THR 1260.0269
SER 1270.0192
GLY 1280.0130
GLY 1290.0087
ALA 1300.0072
SER 1310.0050
VAL 1320.0050
VAL 1330.0058
CYS 1340.0032
PHE 1350.0040
LEU 1360.0065
ASN 1370.0067
ASN 1380.0053
PHE 1390.0055
TYR 1400.0047
PRO 1410.0082
LYS 1420.0104
ASP 1430.0157
ILE 1440.0145
ASN 1450.0176
VAL 1460.0091
LYS 1470.0105
TRP 1480.0120
LYS 1490.0142
ILE 1500.0175
ASP 1510.0194
GLY 1520.0280
SER 1530.0330
GLU 1540.0246
ARG 1550.0217
GLN 1560.0148
ASN 1570.0091
GLY 1580.0125
VAL 1590.0093
LEU 1600.0102
ASN 1610.0053
SER 1620.0069
TRP 1630.0067
THR 1640.0047
ASP 1650.0049
GLN 1660.0056
ASP 1670.0073
SER 1680.0166
LYS 1690.0204
ASP 1700.0107
SER 1710.0063
THR 1720.0050
TYR 1730.0031
SER 1740.0043
MET 1750.0052
SER 1760.0057
SER 1770.0055
THR 1780.0074
LEU 1790.0072
THR 1800.0089
LEU 1810.0114
THR 1820.0078
LYS 1830.0052
ASP 1840.0084
GLU 1850.0113
TYR 1860.0076
GLU 1870.0036
ARG 1880.0081
HIS 1890.0126
ASN 1900.0159
SER 1910.0138
TYR 1920.0141
THR 1930.0148
CYS 1940.0042
GLU 1950.0054
ALA 1960.0084
THR 1970.0091
HIS 1980.0080
LYS 1990.0062
THR 2000.0068
SER 2010.0048
THR 2020.0158
SER 2030.0173
PRO 2040.0114
ILE 2050.0176
VAL 2060.0104
LYS 2070.0062
SER 2080.0101
PHE 2090.0159
ASN 2100.0177
ARG 2110.0117
ASN 2120.0422
GLU 2130.0277
CYS 2140.0154
GLU 10.0098
VAL 20.0048
GLN 30.0075
LEU 40.0024
VAL 50.0031
GLU 60.0034
SER 70.0048
GLY 80.0052
GLY 90.0054
GLY 100.0106
LEU 110.0078
VAL 120.0053
LYS 130.0093
PRO 140.0064
GLY 150.0061
GLY 160.0021
SER 170.0025
LEU 180.0054
LYS 190.0062
LEU 200.0047
SER 210.0060
CYS 220.0067
ALA 230.0062
ALA 240.0069
SER 250.0087
GLY 260.0073
PHE 270.0094
ILE 280.0050
PHE 290.0006
SER 300.0017
ASP 310.0043
TYR 320.0041
TYR 330.0039
MET 340.0009
TYR 350.0009
TRP 360.0014
VAL 370.0057
ARG 380.0061
GLN 390.0063
THR 400.0097
PRO 410.0078
GLU 420.0116
LYS 430.0093
ARG 440.0111
LEU 450.0088
GLU 460.0090
TRP 470.0067
VAL 480.0061
ALA 490.0041
THR 500.0026
ILE 510.0046
SER 520.0061
ASP 520.0072
GLY 530.0128
ASN 540.0187
SER 550.0136
TYR 560.0095
THR 570.0066
TYR 580.0017
TYR 590.0044
VAL 600.0061
ASP 610.0098
SER 620.0058
VAL 630.0057
LYS 640.0075
GLY 650.0112
ARG 660.0094
PHE 670.0027
THR 680.0046
ILE 690.0055
SER 700.0084
ARG 710.0054
ASP 720.0044
ASN 730.0062
ALA 740.0169
LYS 750.0148
ASN 760.0069
ASN 770.0055
LEU 780.0067
TYR 790.0066
LEU 800.0049
GLN 810.0045
MET 820.0060
SER 820.0071
SER 820.0079
LEU 820.0070
LYS 830.0085
SER 840.0084
GLU 850.0110
ASP 860.0090
THR 870.0087
ALA 880.0081
ILE 890.0057
TYR 900.0053
TYR 910.0017
CYS 920.0013
ALA 930.0009
ARG 940.0043
ASP 950.0051
GLY 960.0061
PRO 970.0082
THR 980.0077
ASP 990.0084
SER 1000.0045
SER 1000.0044
GLY 1000.0042
TYR 1000.0043
GLY 1000.0043
GLY 1000.0045
PHE 1000.0046
GLY 1010.0047
TYR 1020.0048
TRP 1030.0017
GLY 1040.0013
GLN 1050.0014
GLY 1060.0025
THR 1070.0062
LEU 1080.0114
VAL 1090.0119
THR 1100.0092
VAL 1110.0058
SER 1120.0165
GLU 1130.0174
ALA 1140.0234
LYS 1150.0271
THR 1160.0135
THR 1170.0168
PRO 1180.0199
PRO 1190.0187
SER 1200.0236
VAL 1210.0080
TYR 1220.0096
PRO 1230.0177
LEU 1240.0093
ALA 1250.0107
PRO 1260.0157
GLY 1270.0268
SER 1280.0441
ALA 1290.1312
ALA 1300.0680
GLN 1330.0846
THR 1340.0550
ASN 1350.0272
SER 1360.0088
MET 1370.0105
VAL 1380.0184
THR 1390.0064
LEU 1400.0086
GLY 1410.0127
CYS 1420.0111
LEU 1430.0066
VAL 1440.0124
LYS 1450.0279
GLY 1460.0240
TYR 1470.0204
PHE 1480.0106
PRO 1490.0085
GLU 1500.0174
PRO 1510.0215
VAL 1520.0176
THR 1530.0152
VAL 1540.0059
THR 1560.0217
TRP 1570.0227
ASN 1620.0189
SER 1630.0200
GLY 1640.0379
SER 1650.0317
LEU 1660.0355
SER 1670.0444
SER 1680.0437
GLY 1690.0383
VAL 1710.0238
HIS 1720.0091
THR 1730.0075
PHE 1740.0120
PRO 1750.0189
ALA 1760.0249
VAL 1770.0244
LEU 1780.0053
GLN 1790.0390
SER 1800.0431
ASP 1830.0306
LEU 1840.0204
TYR 1850.0207
THR 1860.0208
LEU 1870.0180
SER 1880.0133
SER 1890.0068
SER 1900.0103
VAL 1910.0167
THR 1920.0085
VAL 1930.0063
PRO 1940.0043
SER 1950.0211
SER 1960.0333
PRO 1980.0195
ARG 1990.0066
PRO 2000.0082
SER 2020.0196
GLU 2030.0205
THR 2040.0243
VAL 2050.0258
THR 2060.0240
CYS 2080.0196
ASN 2090.0122
VAL 2100.0152
ALA 2110.0185
HIS 2120.0138
PRO 2130.0155
ALA 2140.0153
SER 2150.0288
SER 2160.0344
THR 2170.0232
LYS 2180.0344
VAL 2190.0183
ASP 2200.0164
LYS 2210.0201
LYS 2220.0302
ILE 2230.0226
VAL 2260.0257
PRO 2270.0335
ARG 2280.0361
ASP 2320.0490
CYS 2330.0628

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.