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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 99  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0763
ILE 4790.0607
PHE 4800.0317
ILE 4810.0399
SER 4820.0066
ASP 4830.0041
ASP 4840.0082
LYS 4850.0083
ASP 4860.0100
SER 4870.0071
LEU 4880.0036
LYS 4890.0135
CYS 4900.0116
PRO 4910.0094
CYS 4920.0078
ASP 4930.0070
PRO 4940.0074
GLU 4950.0012
MET 4960.0096
VAL 4970.0327
SER 4980.0269
GLN 4990.0294
SER 5000.0763
THR 5010.0115
CYS 5020.0328
ARG 5030.0122
PHE 5040.0075
PHE 5050.0051
VAL 5060.0071
CYS 5070.0060
LYS 5080.0076
CYS 5090.0075
VAL 5100.0093
GLU 5110.0117
ARG 5120.0095
SER 20.0158
VAL 30.0129
LEU 40.0113
SER 50.0197
GLN 60.0130
SER 70.0108
PRO 80.0240
ALA 90.0255
ILE 100.0331
LEU 110.0141
SER 120.0074
ALA 130.0103
SER 140.0210
PRO 150.0263
GLY 160.0282
GLU 170.0219
LYS 180.0185
VAL 190.0202
THR 200.0098
MET 210.0100
THR 220.0138
CYS 230.0140
ARG 240.0172
ALA 250.0060
ARG 260.0094
SER 270.0339
SER 290.0217
VAL 300.0134
SER 310.0106
TYR 320.0025
MET 330.0028
HIS 340.0054
TRP 350.0081
TYR 360.0079
GLN 370.0089
GLN 380.0088
LYS 390.0127
SER 400.0166
GLY 410.0353
SER 420.0243
SER 430.0156
PRO 440.0130
LYS 450.0127
PRO 460.0085
TRP 470.0096
ILE 480.0083
HIS 490.0036
ALA 500.0073
THR 510.0089
SER 520.0175
ASN 530.0132
LEU 540.0146
ALA 550.0082
SER 560.0471
GLY 570.0215
VAL 580.0274
PRO 590.0298
ALA 600.0301
ARG 610.0158
PHE 620.0183
SER 630.0185
GLY 640.0202
SER 650.0143
GLY 660.0058
SER 670.0207
GLY 680.0305
THR 690.0251
SER 700.0224
TYR 710.0041
SER 720.0080
LEU 730.0121
THR 740.0154
ILE 750.0123
SER 760.0117
ARG 770.0212
VAL 780.0213
GLU 790.0227
ALA 800.0115
GLU 810.0129
ASP 820.0091
ALA 830.0129
ALA 840.0109
THR 850.0089
TYR 860.0051
TYR 870.0067
CYS 880.0095
GLN 890.0055
GLN 900.0058
TRP 910.0048
SER 920.0031
SER 930.0040
HIS 940.0055
PRO 950.0044
PRO 960.0039
THR 970.0041
PHE 980.0074
GLY 990.0083
SER 1000.0093
GLY 1010.0050
THR 1020.0052
LYS 1030.0168
LEU 1040.0148
GLU 1050.0135
ILE 1060.0110
LYS 1070.0086
ARG 1080.0057
ALA 1090.0079
ASP 1100.0072
ALA 1110.0077
ALA 1120.0073
PRO 1130.0049
THR 1140.0041
VAL 1150.0078
SER 1160.0038
ILE 1170.0038
PHE 1180.0056
PRO 1190.0069
PRO 1200.0042
SER 1210.0039
SER 1220.0071
GLU 1230.0092
GLN 1240.0072
LEU 1250.0031
THR 1260.0191
SER 1270.0221
GLY 1280.0095
GLY 1290.0073
ALA 1300.0043
SER 1310.0048
VAL 1320.0048
VAL 1330.0039
CYS 1340.0061
PHE 1350.0044
LEU 1360.0045
ASN 1370.0067
ASN 1380.0091
PHE 1390.0093
TYR 1400.0060
PRO 1410.0066
LYS 1420.0069
ASP 1430.0043
ILE 1440.0061
ASN 1450.0095
VAL 1460.0160
LYS 1470.0114
TRP 1480.0083
LYS 1490.0087
ILE 1500.0118
ASP 1510.0152
GLY 1520.0531
SER 1530.0084
GLU 1540.0395
ARG 1550.0253
GLN 1560.0072
ASN 1570.0164
GLY 1580.0152
VAL 1590.0101
LEU 1600.0071
ASN 1610.0101
SER 1620.0103
TRP 1630.0114
THR 1640.0121
ASP 1650.0121
GLN 1660.0106
ASP 1670.0158
SER 1680.0141
LYS 1690.0141
ASP 1700.0119
SER 1710.0099
THR 1720.0121
TYR 1730.0106
SER 1740.0082
MET 1750.0061
SER 1760.0065
SER 1770.0065
THR 1780.0077
LEU 1790.0128
THR 1800.0104
LEU 1810.0088
THR 1820.0201
LYS 1830.0157
ASP 1840.0173
GLU 1850.0059
TYR 1860.0021
GLU 1870.0110
ARG 1880.0183
HIS 1890.0143
ASN 1900.0078
SER 1910.0123
TYR 1920.0102
THR 1930.0119
CYS 1940.0129
GLU 1950.0123
ALA 1960.0149
THR 1970.0042
HIS 1980.0052
LYS 1990.0088
THR 2000.0172
SER 2010.0193
THR 2020.0165
SER 2030.0450
PRO 2040.0270
ILE 2050.0319
VAL 2060.0217
LYS 2070.0120
SER 2080.0063
PHE 2090.0063
ASN 2100.0074
ARG 2110.0103
ASN 2120.0190
GLU 2130.0194
CYS 2140.0192
GLU 10.0120
VAL 20.0142
GLN 30.0184
LEU 40.0071
VAL 50.0061
GLU 60.0033
SER 70.0079
GLY 80.0080
GLY 90.0074
GLY 100.0135
LEU 110.0162
VAL 120.0211
LYS 130.0128
PRO 140.0243
GLY 150.0293
GLY 160.0175
SER 170.0138
LEU 180.0151
LYS 190.0057
LEU 200.0052
SER 210.0058
CYS 220.0046
ALA 230.0066
ALA 240.0072
SER 250.0100
GLY 260.0091
PHE 270.0083
ILE 280.0071
PHE 290.0047
SER 300.0039
ASP 310.0031
TYR 320.0030
TYR 330.0069
MET 340.0067
TYR 350.0062
TRP 360.0062
VAL 370.0087
ARG 380.0099
GLN 390.0088
THR 400.0138
PRO 410.0181
GLU 420.0115
LYS 430.0095
ARG 440.0139
LEU 450.0111
GLU 460.0084
TRP 470.0069
VAL 480.0114
ALA 490.0093
THR 500.0102
ILE 510.0151
SER 520.0171
ASP 520.0168
GLY 530.0310
ASN 540.0477
SER 550.0375
TYR 560.0276
THR 570.0187
TYR 580.0067
TYR 590.0093
VAL 600.0174
ASP 610.0329
SER 620.0378
VAL 630.0254
LYS 640.0142
GLY 650.0140
ARG 660.0144
PHE 670.0128
THR 680.0086
ILE 690.0077
SER 700.0146
ARG 710.0103
ASP 720.0090
ASN 730.0091
ALA 740.0307
LYS 750.0250
ASN 760.0067
ASN 770.0088
LEU 780.0088
TYR 790.0033
LEU 800.0024
GLN 810.0071
MET 820.0131
SER 820.0105
SER 820.0038
LEU 820.0039
LYS 830.0080
SER 840.0128
GLU 850.0156
ASP 860.0065
THR 870.0041
ALA 880.0060
ILE 890.0064
TYR 900.0070
TYR 910.0084
CYS 920.0082
ALA 930.0061
ARG 940.0032
ASP 950.0019
GLY 960.0017
PRO 970.0146
THR 980.0370
ASP 990.0443
SER 1000.0033
SER 1000.0031
GLY 1000.0045
TYR 1000.0055
GLY 1000.0058
GLY 1000.0042
PHE 1000.0034
GLY 1010.0022
TYR 1020.0033
TRP 1030.0062
GLY 1040.0042
GLN 1050.0043
GLY 1060.0042
THR 1070.0030
LEU 1080.0016
VAL 1090.0131
THR 1100.0163
VAL 1110.0189
SER 1120.0294
GLU 1130.0276
ALA 1140.0114
LYS 1150.0145
THR 1160.0036
THR 1170.0086
PRO 1180.0091
PRO 1190.0056
SER 1200.0053
VAL 1210.0089
TYR 1220.0066
PRO 1230.0044
LEU 1240.0106
ALA 1250.0140
PRO 1260.0148
GLY 1270.0232
SER 1280.0306
ALA 1290.0553
ALA 1300.0178
GLN 1330.0119
THR 1340.0207
ASN 1350.0091
SER 1360.0257
MET 1370.0154
VAL 1380.0063
THR 1390.0064
LEU 1400.0065
GLY 1410.0066
CYS 1420.0062
LEU 1430.0069
VAL 1440.0064
LYS 1450.0072
GLY 1460.0087
TYR 1470.0081
PHE 1480.0047
PRO 1490.0053
GLU 1500.0067
PRO 1510.0103
VAL 1520.0044
THR 1530.0039
VAL 1540.0067
THR 1560.0059
TRP 1570.0052
ASN 1620.0070
SER 1630.0107
GLY 1640.0092
SER 1650.0121
LEU 1660.0085
SER 1670.0068
SER 1680.0274
GLY 1690.0086
VAL 1710.0130
HIS 1720.0111
THR 1730.0104
PHE 1740.0121
PRO 1750.0148
ALA 1760.0142
VAL 1770.0140
LEU 1780.0148
GLN 1790.0075
SER 1800.0195
ASP 1830.0348
LEU 1840.0238
TYR 1850.0103
THR 1860.0079
LEU 1870.0086
SER 1880.0091
SER 1890.0075
SER 1900.0089
VAL 1910.0093
THR 1920.0073
VAL 1930.0059
PRO 1940.0039
SER 1950.0077
SER 1960.0134
PRO 1980.0083
ARG 1990.0064
PRO 2000.0046
SER 2020.0036
GLU 2030.0083
THR 2040.0064
VAL 2050.0062
THR 2060.0043
CYS 2080.0064
ASN 2090.0059
VAL 2100.0058
ALA 2110.0090
HIS 2120.0081
PRO 2130.0149
ALA 2140.0149
SER 2150.0204
SER 2160.0181
THR 2170.0195
LYS 2180.0182
VAL 2190.0171
ASP 2200.0085
LYS 2210.0071
LYS 2220.0075
ILE 2230.0030
VAL 2260.0096
PRO 2270.0107
ARG 2280.0099
ASP 2320.0264
CYS 2330.0283

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.