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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

CA strain for 2608162333311823063

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ILE 421PHE 422 0.0001
PHE 422ILE 423 -0.0001
ILE 423SER 424 0.0228
SER 424ASN 425 0.0000
ASN 425ASP 426 -0.0003
ASP 426LYS 427 0.0511
LYS 427GLU 428 0.0000
GLU 428SER 429 -0.0000
SER 429ILE 430 -0.0357
ILE 430LYS 431 0.0002
LYS 431CYS 432 -0.0004
CYS 432PRO 433 -0.0332
PRO 433CYS 434 -0.0002
CYS 434GLU 435 -0.0001
GLU 435PRO 436 0.0087
PRO 436GLU 437 0.0003
GLU 437ARG 438 0.0003
ARG 438ILE 439 0.0133
ILE 439SER 440 0.0003
SER 440GLU 441 -0.0002
GLU 441SER 442 -0.0811
SER 442THR 443 -0.0001
THR 443CYS 444 0.0003
CYS 444ASN 445 0.0236
ASN 445PHE 446 -0.0001
PHE 446TYR 447 -0.0002
TYR 447VAL 448 -0.1006
VAL 448CYS 449 -0.0001
CYS 449ASN 450 -0.0001
ASN 450CYS 451 -0.0880
CYS 451VAL 452 -0.0001
VAL 452GLU 453 0.0002
GLU 453LYS 454 0.0673
LYS 454GLU 1 0.0122
GLU 1VAL 2 0.0001
VAL 2GLN 3 -0.0003
GLN 3LEU 4 0.0050
LEU 4VAL 5 0.0001
VAL 5GLU 6 -0.0004
GLU 6SER 7 0.0401
SER 7GLY 8 -0.0002
GLY 8GLY 9 -0.0003
GLY 9GLY 10 0.1207
GLY 10LEU 11 0.0003
LEU 11VAL 12 -0.0002
VAL 12LYS 13 -0.0084
LYS 13PRO 14 0.0003
PRO 14GLY 15 -0.0003
GLY 15GLY 16 -0.0138
GLY 16SER 17 -0.0000
SER 17LEU 18 0.0001
LEU 18LYS 19 0.0674
LYS 19LEU 20 0.0000
LEU 20SER 21 -0.0001
SER 21CYS 22 0.0152
CYS 22ALA 23 0.0005
ALA 23ALA 24 0.0001
ALA 24SER 25 0.0034
SER 25GLY 26 -0.0003
GLY 26PHE 27 0.0001
PHE 27ILE 28 -0.0049
ILE 28PHE 29 -0.0002
PHE 29SER 30 0.0001
SER 30ASP 31 0.0240
ASP 31TYR 32 -0.0002
TYR 32TYR 33 0.0003
TYR 33MET 34 0.0335
MET 34TYR 35 0.0001
TYR 35TRP 36 -0.0000
TRP 36VAL 37 0.0279
VAL 37ARG 38 -0.0001
ARG 38GLN 39 0.0001
GLN 39THR 40 0.0114
THR 40PRO 41 0.0002
PRO 41GLU 42 -0.0003
GLU 42LYS 43 0.0241
LYS 43ARG 44 -0.0004
ARG 44LEU 45 0.0000
LEU 45GLU 46 0.1137
GLU 46TRP 47 -0.0003
TRP 47VAL 48 -0.0000
VAL 48ALA 49 0.0656
ALA 49THR 50 -0.0001
THR 50ILE 51 0.0001
ILE 51SER 52 0.0218
SER 52ASP 52 0.0000
ASP 52GLY 53 0.0001
GLY 53ASN 54 0.0003
ASN 54SER 55 0.0313
SER 55TYR 56 -0.0003
TYR 56THR 57 -0.0003
THR 57TYR 58 0.0205
TYR 58TYR 59 0.0002
TYR 59VAL 60 0.0000
VAL 60ASP 61 0.0084
ASP 61SER 62 -0.0001
SER 62VAL 63 0.0000
VAL 63LYS 64 0.0453
LYS 64GLY 65 0.0002
GLY 65ARG 66 -0.0002
ARG 66PHE 67 -0.0038
PHE 67THR 68 0.0002
THR 68ILE 69 -0.0002
ILE 69SER 70 -0.0184
SER 70ARG 71 0.0001
ARG 71ASP 72 0.0002
ASP 72ASN 73 -0.0034
ASN 73ALA 74 0.0003
ALA 74LYS 75 -0.0002
LYS 75ASN 76 -0.0082
ASN 76ASN 77 -0.0002
ASN 77LEU 78 0.0002
LEU 78TYR 79 0.0062
TYR 79LEU 80 0.0001
LEU 80GLN 81 0.0001
GLN 81MET 82 0.0045
MET 82SER 82 -0.0001
SER 82SER 82 -0.0000
SER 82LEU 82 0.0003
LEU 82LYS 83 0.0002
LYS 83SER 84 -0.0001
SER 84GLU 85 -0.0173
GLU 85ASP 86 0.0000
ASP 86THR 87 -0.0000
THR 87ALA 88 0.0675
ALA 88ILE 89 -0.0004
ILE 89TYR 90 0.0001
TYR 90TYR 91 0.0192
TYR 91CYS 92 -0.0002
CYS 92ALA 93 0.0001
ALA 93ARG 94 -0.0100
ARG 94ASP 95 -0.0004
ASP 95GLY 96 0.0001
GLY 96PRO 97 0.0304
PRO 97THR 98 0.0000
THR 98ASP 99 0.0003
ASP 99SER 100 0.0266
SER 100SER 100 -0.0001
SER 100GLY 100 0.0001
GLY 100TYR 100 0.0004
TYR 100GLY 100 -0.0002
GLY 100GLY 100 0.0004
GLY 100PHE 100 -0.0000
PHE 100GLY 101 0.0001
GLY 101TYR 102 -0.0000
TYR 102TRP 103 0.0625
TRP 103GLY 104 0.0001
GLY 104GLN 105 -0.0001
GLN 105GLY 106 0.0460
GLY 106THR 107 0.0002
THR 107LEU 108 -0.0000
LEU 108VAL 109 -0.0125
VAL 109THR 110 0.0002
THR 110VAL 111 -0.0001
VAL 111SER 112 -0.0168
SER 112GLU 113 -0.0003
GLU 113ALA 114 -0.0001
ALA 114LYS 115 -0.0625
LYS 115THR 116 -0.0001
THR 116THR 117 0.0003
THR 117PRO 118 -0.0409
PRO 118PRO 119 0.0001
PRO 119SER 120 0.0002
SER 120VAL 121 -0.0425
VAL 121TYR 122 0.0000
TYR 122PRO 123 -0.0001
PRO 123LEU 124 -0.0167
LEU 124ALA 125 0.0003
ALA 125PRO 126 0.0002
PRO 126GLY 127 0.0244
GLY 127SER 128 0.0001
SER 128ALA 129 -0.0001
ALA 129ALA 130 -0.0367
ALA 130GLN 133 0.0199
GLN 133THR 134 0.0001
THR 134ASN 135 -0.0004
ASN 135SER 136 -0.0102
SER 136MET 137 0.0004
MET 137VAL 138 -0.0004
VAL 138THR 139 -0.0224
THR 139LEU 140 0.0001
LEU 140GLY 141 0.0002
GLY 141CYS 142 -0.0003
CYS 142LEU 143 -0.0002
LEU 143VAL 144 0.0001
VAL 144LYS 145 0.0162
LYS 145GLY 146 -0.0004
GLY 146TYR 147 0.0002
TYR 147PHE 148 -0.1078
PHE 148PRO 149 -0.0003
PRO 149GLU 150 0.0003
GLU 150PRO 151 -0.1054
PRO 151VAL 152 0.0001
VAL 152THR 153 0.0001
THR 153VAL 154 -0.0752
VAL 154THR 156 -0.0468
THR 156TRP 157 -0.0001
TRP 157ASN 162 -0.0143
ASN 162SER 163 -0.0000
SER 163GLY 164 0.0000
GLY 164SER 165 -0.0052
SER 165LEU 166 0.0001
LEU 166SER 167 -0.0002
SER 167SER 168 0.0651
SER 168GLY 169 0.0002
GLY 169VAL 171 0.0232
VAL 171HIS 172 -0.0000
HIS 172THR 173 0.0001
THR 173PHE 174 -0.0323
PHE 174PRO 175 -0.0001
PRO 175ALA 176 0.0001
ALA 176VAL 177 -0.0121
VAL 177LEU 178 -0.0001
LEU 178GLN 179 -0.0001
GLN 179SER 180 0.0145
SER 180ASP 183 0.0091
ASP 183LEU 184 0.0000
LEU 184TYR 185 0.0000
TYR 185THR 186 -0.0209
THR 186LEU 187 -0.0002
LEU 187SER 188 -0.0003
SER 188SER 189 -0.0086
SER 189SER 190 0.0001
SER 190VAL 191 0.0000
VAL 191THR 192 -0.0312
THR 192VAL 193 0.0002
VAL 193PRO 194 0.0002
PRO 194SER 195 -0.0179
SER 195SER 196 -0.0002
SER 196PRO 198 0.0100
PRO 198ARG 199 -0.0002
ARG 199PRO 200 0.0002
PRO 200SER 202 0.0423
SER 202GLU 203 0.0001
GLU 203THR 204 -0.0000
THR 204VAL 205 -0.0447
VAL 205THR 206 -0.0000
THR 206CYS 208 -0.0363
CYS 208ASN 209 -0.0003
ASN 209VAL 210 -0.0003
VAL 210ALA 211 -0.0578
ALA 211HIS 212 -0.0001
HIS 212PRO 213 0.0002
PRO 213ALA 214 -0.0462
ALA 214SER 215 -0.0003
SER 215SER 216 0.0001
SER 216THR 217 -0.0687
THR 217LYS 218 -0.0001
LYS 218VAL 219 0.0005
VAL 219ASP 220 -0.0971
ASP 220LYS 221 -0.0001
LYS 221LYS 222 -0.0003
LYS 222ILE 223 -0.0424
ILE 223VAL 226 -0.0228
VAL 226PRO 227 0.0001
PRO 227ARG 228 0.0004
ARG 228ASP 232 -0.0462
ASP 232CYS 233 -0.0001
CYS 233SER 2 -0.1275
SER 2VAL 3 -0.0003
VAL 3LEU 4 0.0000
LEU 4SER 5 -0.0210
SER 5GLN 6 -0.0001
GLN 6SER 7 -0.0002
SER 7PRO 8 -0.2115
PRO 8ALA 9 -0.0004
ALA 9ILE 10 0.0002
ILE 10LEU 11 0.0999
LEU 11SER 12 0.0002
SER 12ALA 13 -0.0003
ALA 13SER 14 0.1056
SER 14PRO 15 -0.0002
PRO 15GLY 16 -0.0003
GLY 16GLU 17 0.0165
GLU 17LYS 18 -0.0002
LYS 18VAL 19 0.0001
VAL 19THR 20 -0.0375
THR 20MET 21 0.0000
MET 21THR 22 0.0003
THR 22CYS 23 -0.0080
CYS 23ARG 24 -0.0001
ARG 24ALA 25 -0.0002
ALA 25ARG 26 -0.0164
ARG 26SER 27 0.0000
SER 27SER 29 0.0234
SER 29VAL 30 0.0001
VAL 30SER 31 -0.0001
SER 31TYR 32 0.0339
TYR 32MET 33 0.0002
MET 33HIS 34 0.0000
HIS 34TRP 35 -0.0508
TRP 35TYR 36 -0.0000
TYR 36GLN 37 -0.0002
GLN 37GLN 38 -0.0581
GLN 38LYS 39 -0.0000
LYS 39SER 40 0.0001
SER 40GLY 41 0.0113
GLY 41SER 42 -0.0001
SER 42SER 43 0.0001
SER 43PRO 44 0.0030
PRO 44LYS 45 -0.0001
LYS 45PRO 46 0.0000
PRO 46TRP 47 0.0349
TRP 47ILE 48 -0.0001
ILE 48HIS 49 -0.0001
HIS 49ALA 50 -0.0044
ALA 50THR 51 -0.0000
THR 51SER 52 -0.0002
SER 52ASN 53 0.0218
ASN 53LEU 54 0.0000
LEU 54ALA 55 0.0003
ALA 55SER 56 0.0337
SER 56GLY 57 -0.0001
GLY 57VAL 58 -0.0003
VAL 58PRO 59 -0.0050
PRO 59ALA 60 -0.0002
ALA 60ARG 61 -0.0002
ARG 61PHE 62 0.0106
PHE 62SER 63 0.0001
SER 63GLY 64 -0.0003
GLY 64SER 65 0.0259
SER 65GLY 66 0.0002
GLY 66SER 67 -0.0002
SER 67GLY 68 0.0361
GLY 68THR 69 0.0000
THR 69SER 70 0.0001
SER 70TYR 71 0.0193
TYR 71SER 72 0.0002
SER 72LEU 73 -0.0001
LEU 73THR 74 -0.0066
THR 74ILE 75 0.0001
ILE 75SER 76 -0.0000
SER 76ARG 77 -0.0182
ARG 77VAL 78 0.0001
VAL 78GLU 79 -0.0001
GLU 79ALA 80 -0.0540
ALA 80GLU 81 -0.0002
GLU 81ASP 82 -0.0003
ASP 82ALA 83 -0.0580
ALA 83ALA 84 -0.0001
ALA 84THR 85 0.0005
THR 85TYR 86 -0.0580
TYR 86TYR 87 -0.0001
TYR 87CYS 88 -0.0002
CYS 88GLN 89 -0.0650
GLN 89GLN 90 -0.0000
GLN 90TRP 91 0.0002
TRP 91SER 92 -0.0094
SER 92SER 93 -0.0001
SER 93HIS 94 0.0003
HIS 94PRO 95 -0.0303
PRO 95PRO 96 -0.0000
PRO 96THR 97 0.0000
THR 97PHE 98 0.0043
PHE 98GLY 99 0.0001
GLY 99SER 100 -0.0002
SER 100GLY 101 -0.0030
GLY 101THR 102 0.0001
THR 102LYS 103 0.0001
LYS 103LEU 104 0.0717
LEU 104GLU 105 -0.0002
GLU 105ILE 106 -0.0002
ILE 106LYS 107 0.0242
LYS 107ARG 108 0.0001
ARG 108ALA 109 0.0001
ALA 109ASP 110 -0.0062
ASP 110ALA 111 0.0002
ALA 111ALA 112 -0.0002
ALA 112PRO 113 -0.0483
PRO 113THR 114 0.0005
THR 114VAL 115 -0.0005
VAL 115SER 116 -0.1553
SER 116ILE 117 0.0003
ILE 117PHE 118 -0.0000
PHE 118PRO 119 -0.0687
PRO 119PRO 120 -0.0001
PRO 120SER 121 0.0001
SER 121SER 122 -0.0059
SER 122GLU 123 -0.0001
GLU 123GLN 124 0.0004
GLN 124LEU 125 -0.0288
LEU 125THR 126 -0.0000
THR 126SER 127 0.0001
SER 127GLY 128 -0.0027
GLY 128GLY 129 0.0002
GLY 129ALA 130 0.0003
ALA 130SER 131 -0.0331
SER 131VAL 132 0.0004
VAL 132VAL 133 0.0000
VAL 133CYS 134 -0.1018
CYS 134PHE 135 0.0002
PHE 135LEU 136 0.0002
LEU 136ASN 137 -0.0782
ASN 137ASN 138 -0.0001
ASN 138PHE 139 -0.0001
PHE 139TYR 140 -0.0515
TYR 140PRO 141 -0.0000
PRO 141LYS 142 -0.0001
LYS 142ASP 143 -0.0200
ASP 143ILE 144 0.0000
ILE 144ASN 145 0.0001
ASN 145VAL 146 0.0384
VAL 146LYS 147 -0.0001
LYS 147TRP 148 0.0000
TRP 148LYS 149 -0.0048
LYS 149ILE 150 0.0001
ILE 150ASP 151 -0.0001
ASP 151GLY 152 0.0077
GLY 152SER 153 0.0001
SER 153GLU 154 -0.0000
GLU 154ARG 155 0.0053
ARG 155GLN 156 0.0001
GLN 156ASN 157 -0.0001
ASN 157GLY 158 -0.0076
GLY 158VAL 159 0.0003
VAL 159LEU 160 0.0002
LEU 160ASN 161 0.0213
ASN 161SER 162 0.0002
SER 162TRP 163 -0.0004
TRP 163THR 164 -0.0778
THR 164ASP 165 0.0001
ASP 165GLN 166 -0.0003
GLN 166ASP 167 0.0542
ASP 167SER 168 -0.0002
SER 168LYS 169 0.0002
LYS 169ASP 170 0.0035
ASP 170SER 171 -0.0000
SER 171THR 172 -0.0003
THR 172TYR 173 0.0617
TYR 173SER 174 -0.0001
SER 174MET 175 -0.0001
MET 175SER 176 -0.0930
SER 176SER 177 -0.0001
SER 177THR 178 -0.0000
THR 178LEU 179 -0.0544
LEU 179THR 180 0.0001
THR 180LEU 181 -0.0002
LEU 181THR 182 -0.0033
THR 182LYS 183 0.0001
LYS 183ASP 184 0.0002
ASP 184GLU 185 -0.0003
GLU 185TYR 186 -0.0001
TYR 186GLU 187 0.0002
GLU 187ARG 188 -0.0141
ARG 188HIS 189 -0.0005
HIS 189ASN 190 -0.0001
ASN 190SER 191 -0.0242
SER 191TYR 192 0.0003
TYR 192THR 193 -0.0002
THR 193CYS 194 -0.0465
CYS 194GLU 195 -0.0003
GLU 195ALA 196 -0.0004
ALA 196THR 197 0.0224
THR 197HIS 198 -0.0000
HIS 198LYS 199 0.0004
LYS 199THR 200 0.0034
THR 200SER 201 -0.0002
SER 201THR 202 -0.0004
THR 202SER 203 0.0171
SER 203PRO 204 0.0002
PRO 204ILE 205 0.0001
ILE 205VAL 206 -0.0919
VAL 206LYS 207 -0.0001
LYS 207SER 208 0.0001
SER 208PHE 209 -0.0946
PHE 209ASN 210 0.0000
ASN 210ARG 211 0.0005
ARG 211ASN 212 -0.0475
ASN 212GLU 213 -0.0000
GLU 213CYS 214 0.0001

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.