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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 100  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0541
ILE 4210.0382
PHE 4220.0203
ILE 4230.0267
SER 4240.0101
ASN 4250.0036
ASP 4260.0051
LYS 4270.0047
GLU 4280.0046
SER 4290.0092
ILE 4300.0120
LYS 4310.0092
CYS 4320.0090
PRO 4330.0034
CYS 4340.0065
GLU 4350.0081
PRO 4360.0167
GLU 4370.0150
ARG 4380.0141
ILE 4390.0071
SER 4400.0045
GLU 4410.0150
SER 4420.0140
THR 4430.0048
CYS 4440.0076
ASN 4450.0035
PHE 4460.0078
TYR 4470.0145
VAL 4480.0133
CYS 4490.0134
ASN 4500.0114
CYS 4510.0135
VAL 4520.0193
GLU 4530.0198
LYS 4540.0204
GLU 10.0120
VAL 20.0133
GLN 30.0053
LEU 40.0045
VAL 50.0042
GLU 60.0044
SER 70.0040
GLY 80.0035
GLY 90.0029
GLY 100.0095
LEU 110.0102
VAL 120.0083
LYS 130.0135
PRO 140.0132
GLY 150.0154
GLY 160.0109
SER 170.0117
LEU 180.0125
LYS 190.0096
LEU 200.0090
SER 210.0112
CYS 220.0085
ALA 230.0102
ALA 240.0106
SER 250.0111
GLY 260.0148
PHE 270.0162
ILE 280.0048
PHE 290.0058
SER 300.0107
ASP 310.0075
TYR 320.0042
TYR 330.0089
MET 340.0055
TYR 350.0047
TRP 360.0037
VAL 370.0084
ARG 380.0054
GLN 390.0024
THR 400.0160
PRO 410.0349
GLU 420.0295
LYS 430.0220
ARG 440.0108
LEU 450.0094
GLU 460.0097
TRP 470.0086
VAL 480.0091
ALA 490.0114
THR 500.0110
ILE 510.0153
SER 520.0134
ASP 520.0190
GLY 530.0228
ASN 540.0364
SER 550.0337
TYR 560.0249
THR 570.0195
TYR 580.0089
TYR 590.0077
VAL 600.0070
ASP 610.0065
SER 620.0079
VAL 630.0073
LYS 640.0058
GLY 650.0102
ARG 660.0103
PHE 670.0046
THR 680.0040
ILE 690.0094
SER 700.0137
ARG 710.0100
ASP 720.0078
ASN 730.0135
ALA 740.0396
LYS 750.0235
ASN 760.0061
ASN 770.0080
LEU 780.0097
TYR 790.0109
LEU 800.0090
GLN 810.0078
MET 820.0137
SER 820.0127
SER 820.0105
LEU 820.0083
LYS 830.0058
SER 840.0050
GLU 850.0115
ASP 860.0143
THR 870.0159
ALA 880.0083
ILE 890.0075
TYR 900.0076
TYR 910.0045
CYS 920.0033
ALA 930.0031
ARG 940.0042
ASP 950.0059
GLY 960.0107
PRO 970.0194
THR 980.0201
ASP 990.0259
SER 1000.0129
SER 1000.0089
GLY 1000.0072
TYR 1000.0099
GLY 1000.0104
GLY 1000.0099
PHE 1000.0082
GLY 1010.0089
TYR 1020.0087
TRP 1030.0066
GLY 1040.0062
GLN 1050.0065
GLY 1060.0067
THR 1070.0053
LEU 1080.0042
VAL 1090.0097
THR 1100.0094
VAL 1110.0068
SER 1120.0156
GLU 1130.0176
ALA 1140.0203
LYS 1150.0125
THR 1160.0110
THR 1170.0104
PRO 1180.0101
PRO 1190.0064
SER 1200.0062
VAL 1210.0061
TYR 1220.0056
PRO 1230.0040
LEU 1240.0067
ALA 1250.0078
PRO 1260.0120
GLY 1270.0028
SER 1280.0126
ALA 1290.0255
ALA 1300.0216
GLN 1330.0241
THR 1340.0082
ASN 1350.0256
SER 1360.0244
MET 1370.0121
VAL 1380.0131
THR 1390.0158
LEU 1400.0113
GLY 1410.0077
CYS 1420.0016
LEU 1430.0025
VAL 1440.0055
LYS 1450.0098
GLY 1460.0060
TYR 1470.0052
PHE 1480.0073
PRO 1490.0089
GLU 1500.0102
PRO 1510.0053
VAL 1520.0060
THR 1530.0077
VAL 1540.0073
THR 1560.0024
TRP 1570.0020
ASN 1620.0043
SER 1630.0097
GLY 1640.0139
SER 1650.0126
LEU 1660.0100
SER 1670.0083
SER 1680.0156
GLY 1690.0094
VAL 1710.0049
HIS 1720.0081
THR 1730.0123
PHE 1740.0148
PRO 1750.0199
ALA 1760.0202
VAL 1770.0149
LEU 1780.0013
GLN 1790.0185
SER 1800.0148
ASP 1830.0104
LEU 1840.0031
TYR 1850.0057
THR 1860.0105
LEU 1870.0107
SER 1880.0109
SER 1890.0060
SER 1900.0048
VAL 1910.0055
THR 1920.0162
VAL 1930.0143
PRO 1940.0117
SER 1950.0118
SER 1960.0173
PRO 1980.0107
ARG 1990.0044
PRO 2000.0030
SER 2020.0057
GLU 2030.0054
THR 2040.0108
VAL 2050.0095
THR 2060.0073
CYS 2080.0047
ASN 2090.0033
VAL 2100.0040
ALA 2110.0054
HIS 2120.0044
PRO 2130.0049
ALA 2140.0071
SER 2150.0069
SER 2160.0098
THR 2170.0119
LYS 2180.0121
VAL 2190.0129
ASP 2200.0094
LYS 2210.0109
LYS 2220.0133
ILE 2230.0092
VAL 2260.0129
PRO 2270.0079
ARG 2280.0077
ASP 2320.0255
CYS 2330.0185
SER 20.0206
VAL 30.0217
LEU 40.0206
SER 50.0133
GLN 60.0051
SER 70.0058
PRO 80.0307
ALA 90.0332
ILE 100.0326
LEU 110.0140
SER 120.0112
ALA 130.0194
SER 140.0274
PRO 150.0201
GLY 160.0130
GLU 170.0111
LYS 180.0140
VAL 190.0157
THR 200.0082
MET 210.0062
THR 220.0070
CYS 230.0124
ARG 240.0165
ALA 250.0166
ARG 260.0236
SER 270.0268
SER 290.0147
VAL 300.0138
SER 310.0139
TYR 320.0037
MET 330.0053
HIS 340.0099
TRP 350.0077
TYR 360.0071
GLN 370.0049
GLN 380.0041
LYS 390.0050
SER 400.0078
GLY 410.0246
SER 420.0184
SER 430.0078
PRO 440.0098
LYS 450.0088
PRO 460.0129
TRP 470.0131
ILE 480.0175
HIS 490.0194
ALA 500.0159
THR 510.0166
SER 520.0172
ASN 530.0310
LEU 540.0279
ALA 550.0316
SER 560.0541
GLY 570.0460
VAL 580.0282
PRO 590.0249
ALA 600.0235
ARG 610.0119
PHE 620.0051
SER 630.0066
GLY 640.0129
SER 650.0145
GLY 660.0115
SER 670.0193
GLY 680.0206
THR 690.0190
SER 700.0173
TYR 710.0083
SER 720.0061
LEU 730.0068
THR 740.0100
ILE 750.0078
SER 760.0153
ARG 770.0150
VAL 780.0076
GLU 790.0059
ALA 800.0078
GLU 810.0068
ASP 820.0067
ALA 830.0071
ALA 840.0051
THR 850.0061
TYR 860.0027
TYR 870.0025
CYS 880.0022
GLN 890.0086
GLN 900.0080
TRP 910.0076
SER 920.0131
SER 930.0108
HIS 940.0070
PRO 950.0062
PRO 960.0092
THR 970.0103
PHE 980.0066
GLY 990.0062
SER 1000.0035
GLY 1010.0112
THR 1020.0104
LYS 1030.0128
LEU 1040.0038
GLU 1050.0035
ILE 1060.0098
LYS 1070.0144
ARG 1080.0168
ALA 1090.0198
ASP 1100.0143
ALA 1110.0158
ALA 1120.0177
PRO 1130.0179
THR 1140.0236
VAL 1150.0254
SER 1160.0221
ILE 1170.0199
PHE 1180.0154
PRO 1190.0189
PRO 1200.0214
SER 1210.0182
SER 1220.0254
GLU 1230.0227
GLN 1240.0246
LEU 1250.0329
THR 1260.0350
SER 1270.0469
GLY 1280.0236
GLY 1290.0227
ALA 1300.0223
SER 1310.0128
VAL 1320.0079
VAL 1330.0074
CYS 1340.0145
PHE 1350.0136
LEU 1360.0148
ASN 1370.0103
ASN 1380.0079
PHE 1390.0070
TYR 1400.0050
PRO 1410.0057
LYS 1420.0046
ASP 1430.0056
ILE 1440.0075
ASN 1450.0150
VAL 1460.0119
LYS 1470.0122
TRP 1480.0125
LYS 1490.0217
ILE 1500.0203
ASP 1510.0199
GLY 1520.0339
SER 1530.0187
GLU 1540.0366
ARG 1550.0234
GLN 1560.0108
ASN 1570.0101
GLY 1580.0154
VAL 1590.0137
LEU 1600.0130
ASN 1610.0230
SER 1620.0210
TRP 1630.0223
THR 1640.0206
ASP 1650.0207
GLN 1660.0152
ASP 1670.0143
SER 1680.0133
LYS 1690.0261
ASP 1700.0129
SER 1710.0127
THR 1720.0120
TYR 1730.0086
SER 1740.0096
MET 1750.0131
SER 1760.0135
SER 1770.0104
THR 1780.0061
LEU 1790.0106
THR 1800.0136
LEU 1810.0154
THR 1820.0309
LYS 1830.0199
ASP 1840.0324
GLU 1850.0121
TYR 1860.0079
GLU 1870.0114
ARG 1880.0077
HIS 1890.0115
ASN 1900.0131
SER 1910.0113
TYR 1920.0127
THR 1930.0177
CYS 1940.0217
GLU 1950.0190
ALA 1960.0185
THR 1970.0144
HIS 1980.0112
LYS 1990.0157
THR 2000.0161
SER 2010.0089
THR 2020.0264
SER 2030.0384
PRO 2040.0293
ILE 2050.0149
VAL 2060.0230
LYS 2070.0214
SER 2080.0181
PHE 2090.0022
ASN 2100.0070
ARG 2110.0139
ASN 2120.0434
GLU 2130.0340
CYS 2140.0308

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.