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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 101  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0794
ILE 4210.0311
PHE 4220.0169
ILE 4230.0233
SER 4240.0150
ASN 4250.0145
ASP 4260.0154
LYS 4270.0100
GLU 4280.0041
SER 4290.0108
ILE 4300.0104
LYS 4310.0079
CYS 4320.0082
PRO 4330.0043
CYS 4340.0084
GLU 4350.0106
PRO 4360.0115
GLU 4370.0065
ARG 4380.0054
ILE 4390.0148
SER 4400.0115
GLU 4410.0103
SER 4420.0155
THR 4430.0066
CYS 4440.0052
ASN 4450.0112
PHE 4460.0105
TYR 4470.0133
VAL 4480.0084
CYS 4490.0090
ASN 4500.0069
CYS 4510.0028
VAL 4520.0071
GLU 4530.0127
LYS 4540.0223
GLU 10.0251
VAL 20.0206
GLN 30.0224
LEU 40.0178
VAL 50.0235
GLU 60.0204
SER 70.0283
GLY 80.0178
GLY 90.0169
GLY 100.0205
LEU 110.0270
VAL 120.0252
LYS 130.0331
PRO 140.0218
GLY 150.0192
GLY 160.0161
SER 170.0128
LEU 180.0107
LYS 190.0114
LEU 200.0122
SER 210.0151
CYS 220.0112
ALA 230.0146
ALA 240.0152
SER 250.0207
GLY 260.0220
PHE 270.0248
ILE 280.0159
PHE 290.0109
SER 300.0101
ASP 310.0157
TYR 320.0130
TYR 330.0110
MET 340.0088
TYR 350.0082
TRP 360.0064
VAL 370.0101
ARG 380.0069
GLN 390.0128
THR 400.0144
PRO 410.0719
GLU 420.0374
LYS 430.0404
ARG 440.0331
LEU 450.0218
GLU 460.0155
TRP 470.0137
VAL 480.0146
ALA 490.0094
THR 500.0100
ILE 510.0122
SER 520.0088
ASP 520.0260
GLY 530.0312
ASN 540.0383
SER 550.0326
TYR 560.0237
THR 570.0169
TYR 580.0119
TYR 590.0125
VAL 600.0119
ASP 610.0121
SER 620.0087
VAL 630.0092
LYS 640.0115
GLY 650.0080
ARG 660.0080
PHE 670.0084
THR 680.0072
ILE 690.0069
SER 700.0039
ARG 710.0056
ASP 720.0086
ASN 730.0209
ALA 740.0392
LYS 750.0331
ASN 760.0076
ASN 770.0070
LEU 780.0072
TYR 790.0085
LEU 800.0088
GLN 810.0092
MET 820.0111
SER 820.0132
SER 820.0110
LEU 820.0046
LYS 830.0034
SER 840.0111
GLU 850.0134
ASP 860.0096
THR 870.0090
ALA 880.0045
ILE 890.0077
TYR 900.0076
TYR 910.0075
CYS 920.0047
ALA 930.0056
ARG 940.0144
ASP 950.0123
GLY 960.0127
PRO 970.0347
THR 980.0427
ASP 990.0396
SER 1000.0073
SER 1000.0054
GLY 1000.0045
TYR 1000.0064
GLY 1000.0073
GLY 1000.0064
PHE 1000.0080
GLY 1010.0065
TYR 1020.0106
TRP 1030.0063
GLY 1040.0133
GLN 1050.0204
GLY 1060.0223
THR 1070.0155
LEU 1080.0108
VAL 1090.0102
THR 1100.0171
VAL 1110.0180
SER 1120.0216
GLU 1130.0218
ALA 1140.0203
LYS 1150.0552
THR 1160.0359
THR 1170.0239
PRO 1180.0161
PRO 1190.0129
SER 1200.0126
VAL 1210.0058
TYR 1220.0048
PRO 1230.0056
LEU 1240.0027
ALA 1250.0032
PRO 1260.0041
GLY 1270.0051
SER 1280.0051
ALA 1290.0118
ALA 1300.0102
GLN 1330.0186
THR 1340.0122
ASN 1350.0026
SER 1360.0095
MET 1370.0093
VAL 1380.0119
THR 1390.0052
LEU 1400.0035
GLY 1410.0026
CYS 1420.0039
LEU 1430.0037
VAL 1440.0045
LYS 1450.0056
GLY 1460.0064
TYR 1470.0081
PHE 1480.0057
PRO 1490.0083
GLU 1500.0072
PRO 1510.0081
VAL 1520.0073
THR 1530.0087
VAL 1540.0069
THR 1560.0033
TRP 1570.0021
ASN 1620.0078
SER 1630.0088
GLY 1640.0059
SER 1650.0026
LEU 1660.0034
SER 1670.0125
SER 1680.0191
GLY 1690.0034
VAL 1710.0046
HIS 1720.0055
THR 1730.0096
PHE 1740.0167
PRO 1750.0229
ALA 1760.0158
VAL 1770.0124
LEU 1780.0038
GLN 1790.0178
SER 1800.0278
ASP 1830.0187
LEU 1840.0114
TYR 1850.0059
THR 1860.0027
LEU 1870.0057
SER 1880.0068
SER 1890.0028
SER 1900.0012
VAL 1910.0037
THR 1920.0066
VAL 1930.0038
PRO 1940.0049
SER 1950.0187
SER 1960.0185
PRO 1980.0084
ARG 1990.0097
PRO 2000.0111
SER 2020.0099
GLU 2030.0102
THR 2040.0097
VAL 2050.0039
THR 2060.0062
CYS 2080.0073
ASN 2090.0092
VAL 2100.0090
ALA 2110.0115
HIS 2120.0118
PRO 2130.0161
ALA 2140.0066
SER 2150.0121
SER 2160.0231
THR 2170.0138
LYS 2180.0195
VAL 2190.0137
ASP 2200.0119
LYS 2210.0079
LYS 2220.0080
ILE 2230.0028
VAL 2260.0050
PRO 2270.0051
ARG 2280.0068
ASP 2320.0122
CYS 2330.0121
SER 20.0125
VAL 30.0105
LEU 40.0085
SER 50.0152
GLN 60.0086
SER 70.0080
PRO 80.0150
ALA 90.0115
ILE 100.0148
LEU 110.0118
SER 120.0128
ALA 130.0100
SER 140.0106
PRO 150.0150
GLY 160.0155
GLU 170.0112
LYS 180.0097
VAL 190.0110
THR 200.0128
MET 210.0086
THR 220.0091
CYS 230.0095
ARG 240.0130
ALA 250.0091
ARG 260.0159
SER 270.0158
SER 290.0118
VAL 300.0120
SER 310.0128
TYR 320.0070
MET 330.0077
HIS 340.0094
TRP 350.0064
TYR 360.0061
GLN 370.0057
GLN 380.0086
LYS 390.0075
SER 400.0050
GLY 410.0794
SER 420.0462
SER 430.0085
PRO 440.0092
LYS 450.0089
PRO 460.0088
TRP 470.0083
ILE 480.0086
HIS 490.0089
ALA 500.0083
THR 510.0093
SER 520.0110
ASN 530.0120
LEU 540.0119
ALA 550.0091
SER 560.0192
GLY 570.0079
VAL 580.0149
PRO 590.0086
ALA 600.0113
ARG 610.0033
PHE 620.0091
SER 630.0091
GLY 640.0098
SER 650.0143
GLY 660.0154
SER 670.0261
GLY 680.0206
THR 690.0150
SER 700.0170
TYR 710.0074
SER 720.0066
LEU 730.0094
THR 740.0092
ILE 750.0080
SER 760.0062
ARG 770.0119
VAL 780.0143
GLU 790.0227
ALA 800.0074
GLU 810.0103
ASP 820.0097
ALA 830.0052
ALA 840.0021
THR 850.0027
TYR 860.0071
TYR 870.0076
CYS 880.0065
GLN 890.0097
GLN 900.0085
TRP 910.0075
SER 920.0058
SER 930.0027
HIS 940.0065
PRO 950.0093
PRO 960.0097
THR 970.0108
PHE 980.0095
GLY 990.0117
SER 1000.0162
GLY 1010.0122
THR 1020.0078
LYS 1030.0063
LEU 1040.0094
GLU 1050.0113
ILE 1060.0092
LYS 1070.0149
ARG 1080.0153
ALA 1090.0176
ASP 1100.0203
ALA 1110.0207
ALA 1120.0229
PRO 1130.0185
THR 1140.0205
VAL 1150.0215
SER 1160.0107
ILE 1170.0088
PHE 1180.0055
PRO 1190.0047
PRO 1200.0047
SER 1210.0040
SER 1220.0107
GLU 1230.0077
GLN 1240.0048
LEU 1250.0064
THR 1260.0070
SER 1270.0079
GLY 1280.0025
GLY 1290.0054
ALA 1300.0063
SER 1310.0024
VAL 1320.0028
VAL 1330.0043
CYS 1340.0111
PHE 1350.0112
LEU 1360.0145
ASN 1370.0112
ASN 1380.0066
PHE 1390.0074
TYR 1400.0081
PRO 1410.0068
LYS 1420.0022
ASP 1430.0044
ILE 1440.0064
ASN 1450.0105
VAL 1460.0084
LYS 1470.0053
TRP 1480.0040
LYS 1490.0062
ILE 1500.0070
ASP 1510.0073
GLY 1520.0134
SER 1530.0118
GLU 1540.0174
ARG 1550.0057
GLN 1560.0091
ASN 1570.0197
GLY 1580.0178
VAL 1590.0194
LEU 1600.0202
ASN 1610.0305
SER 1620.0275
TRP 1630.0318
THR 1640.0242
ASP 1650.0210
GLN 1660.0145
ASP 1670.0113
SER 1680.0037
LYS 1690.0156
ASP 1700.0097
SER 1710.0127
THR 1720.0088
TYR 1730.0086
SER 1740.0119
MET 1750.0173
SER 1760.0177
SER 1770.0161
THR 1780.0121
LEU 1790.0099
THR 1800.0094
LEU 1810.0118
THR 1820.0181
LYS 1830.0045
ASP 1840.0100
GLU 1850.0047
TYR 1860.0060
GLU 1870.0064
ARG 1880.0092
HIS 1890.0101
ASN 1900.0097
SER 1910.0062
TYR 1920.0067
THR 1930.0074
CYS 1940.0117
GLU 1950.0119
ALA 1960.0146
THR 1970.0147
HIS 1980.0100
LYS 1990.0045
THR 2000.0095
SER 2010.0163
THR 2020.0300
SER 2030.0377
PRO 2040.0289
ILE 2050.0101
VAL 2060.0104
LYS 2070.0116
SER 2080.0107
PHE 2090.0070
ASN 2100.0069
ARG 2110.0079
ASN 2120.0108
GLU 2130.0089
CYS 2140.0079

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.