CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 103  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0650
ILE 4210.0455
PHE 4220.0194
ILE 4230.0284
SER 4240.0071
ASN 4250.0102
ASP 4260.0128
LYS 4270.0082
GLU 4280.0103
SER 4290.0109
ILE 4300.0048
LYS 4310.0031
CYS 4320.0068
PRO 4330.0104
CYS 4340.0108
GLU 4350.0113
PRO 4360.0099
GLU 4370.0033
ARG 4380.0135
ILE 4390.0131
SER 4400.0125
GLU 4410.0046
SER 4420.0150
THR 4430.0122
CYS 4440.0125
ASN 4450.0178
PHE 4460.0099
TYR 4470.0088
VAL 4480.0085
CYS 4490.0089
ASN 4500.0071
CYS 4510.0155
VAL 4520.0193
GLU 4530.0226
LYS 4540.0613
GLU 10.0188
VAL 20.0213
GLN 30.0182
LEU 40.0123
VAL 50.0097
GLU 60.0093
SER 70.0066
GLY 80.0069
GLY 90.0076
GLY 100.0046
LEU 110.0038
VAL 120.0058
LYS 130.0092
PRO 140.0068
GLY 150.0104
GLY 160.0068
SER 170.0033
LEU 180.0018
LYS 190.0069
LEU 200.0045
SER 210.0076
CYS 220.0078
ALA 230.0112
ALA 240.0137
SER 250.0159
GLY 260.0209
PHE 270.0207
ILE 280.0083
PHE 290.0087
SER 300.0058
ASP 310.0060
TYR 320.0055
TYR 330.0099
MET 340.0050
TYR 350.0043
TRP 360.0052
VAL 370.0095
ARG 380.0072
GLN 390.0070
THR 400.0106
PRO 410.0203
GLU 420.0194
LYS 430.0137
ARG 440.0158
LEU 450.0081
GLU 460.0102
TRP 470.0111
VAL 480.0080
ALA 490.0084
THR 500.0080
ILE 510.0127
SER 520.0139
ASP 520.0257
GLY 530.0326
ASN 540.0434
SER 550.0342
TYR 560.0231
THR 570.0139
TYR 580.0063
TYR 590.0083
VAL 600.0125
ASP 610.0239
SER 620.0170
VAL 630.0062
LYS 640.0098
GLY 650.0060
ARG 660.0023
PHE 670.0024
THR 680.0034
ILE 690.0056
SER 700.0162
ARG 710.0139
ASP 720.0133
ASN 730.0157
ALA 740.0364
LYS 750.0205
ASN 760.0158
ASN 770.0146
LEU 780.0128
TYR 790.0126
LEU 800.0100
GLN 810.0076
MET 820.0039
SER 820.0029
SER 820.0035
LEU 820.0039
LYS 830.0059
SER 840.0074
GLU 850.0074
ASP 860.0055
THR 870.0074
ALA 880.0063
ILE 890.0099
TYR 900.0096
TYR 910.0103
CYS 920.0079
ALA 930.0080
ARG 940.0043
ASP 950.0046
GLY 960.0075
PRO 970.0363
THR 980.0446
ASP 990.0244
SER 1000.0049
SER 1000.0065
GLY 1000.0099
TYR 1000.0090
GLY 1000.0096
GLY 1000.0052
PHE 1000.0029
GLY 1010.0041
TYR 1020.0068
TRP 1030.0127
GLY 1040.0133
GLN 1050.0124
GLY 1060.0121
THR 1070.0101
LEU 1080.0080
VAL 1090.0038
THR 1100.0035
VAL 1110.0038
SER 1120.0023
GLU 1130.0080
ALA 1140.0092
LYS 1150.0075
THR 1160.0064
THR 1170.0037
PRO 1180.0042
PRO 1190.0043
SER 1200.0072
VAL 1210.0096
TYR 1220.0070
PRO 1230.0119
LEU 1240.0066
ALA 1250.0082
PRO 1260.0102
GLY 1270.0040
SER 1280.0017
ALA 1290.0100
ALA 1300.0130
GLN 1330.0078
THR 1340.0078
ASN 1350.0084
SER 1360.0077
MET 1370.0083
VAL 1380.0084
THR 1390.0086
LEU 1400.0067
GLY 1410.0037
CYS 1420.0044
LEU 1430.0032
VAL 1440.0046
LYS 1450.0050
GLY 1460.0036
TYR 1470.0011
PHE 1480.0059
PRO 1490.0083
GLU 1500.0096
PRO 1510.0062
VAL 1520.0057
THR 1530.0083
VAL 1540.0090
THR 1560.0048
TRP 1570.0031
ASN 1620.0144
SER 1630.0218
GLY 1640.0150
SER 1650.0138
LEU 1660.0120
SER 1670.0144
SER 1680.0046
GLY 1690.0101
VAL 1710.0067
HIS 1720.0048
THR 1730.0079
PHE 1740.0098
PRO 1750.0127
ALA 1760.0120
VAL 1770.0129
LEU 1780.0075
GLN 1790.0062
SER 1800.0138
ASP 1830.0193
LEU 1840.0111
TYR 1850.0034
THR 1860.0058
LEU 1870.0064
SER 1880.0070
SER 1890.0038
SER 1900.0008
VAL 1910.0032
THR 1920.0083
VAL 1930.0080
PRO 1940.0075
SER 1950.0065
SER 1960.0087
PRO 1980.0066
ARG 1990.0026
PRO 2000.0033
SER 2020.0050
GLU 2030.0061
THR 2040.0085
VAL 2050.0107
THR 2060.0098
CYS 2080.0049
ASN 2090.0026
VAL 2100.0056
ALA 2110.0031
HIS 2120.0043
PRO 2130.0068
ALA 2140.0096
SER 2150.0086
SER 2160.0099
THR 2170.0087
LYS 2180.0131
VAL 2190.0168
ASP 2200.0084
LYS 2210.0106
LYS 2220.0108
ILE 2230.0103
VAL 2260.0098
PRO 2270.0071
ARG 2280.0037
ASP 2320.0310
CYS 2330.0292
SER 20.0225
VAL 30.0231
LEU 40.0199
SER 50.0137
GLN 60.0068
SER 70.0056
PRO 80.0178
ALA 90.0185
ILE 100.0222
LEU 110.0133
SER 120.0084
ALA 130.0093
SER 140.0146
PRO 150.0127
GLY 160.0207
GLU 170.0132
LYS 180.0046
VAL 190.0064
THR 200.0049
MET 210.0030
THR 220.0041
CYS 230.0043
ARG 240.0081
ALA 250.0172
ARG 260.0310
SER 270.0175
SER 290.0178
VAL 300.0211
SER 310.0262
TYR 320.0099
MET 330.0100
HIS 340.0101
TRP 350.0079
TYR 360.0088
GLN 370.0093
GLN 380.0045
LYS 390.0038
SER 400.0107
GLY 410.0204
SER 420.0180
SER 430.0140
PRO 440.0123
LYS 450.0117
PRO 460.0165
TRP 470.0197
ILE 480.0179
HIS 490.0170
ALA 500.0187
THR 510.0170
SER 520.0174
ASN 530.0250
LEU 540.0266
ALA 550.0344
SER 560.0650
GLY 570.0564
VAL 580.0483
PRO 590.0467
ALA 600.0494
ARG 610.0264
PHE 620.0158
SER 630.0118
GLY 640.0131
SER 650.0215
GLY 660.0286
SER 670.0399
GLY 680.0260
THR 690.0096
SER 700.0189
TYR 710.0094
SER 720.0082
LEU 730.0071
THR 740.0087
ILE 750.0106
SER 760.0159
ARG 770.0178
VAL 780.0034
GLU 790.0077
ALA 800.0078
GLU 810.0079
ASP 820.0064
ALA 830.0066
ALA 840.0031
THR 850.0030
TYR 860.0024
TYR 870.0041
CYS 880.0056
GLN 890.0108
GLN 900.0141
TRP 910.0153
SER 920.0166
SER 930.0118
HIS 940.0167
PRO 950.0177
PRO 960.0179
THR 970.0194
PHE 980.0122
GLY 990.0146
SER 1000.0139
GLY 1010.0085
THR 1020.0088
LYS 1030.0109
LEU 1040.0086
GLU 1050.0054
ILE 1060.0038
LYS 1070.0152
ARG 1080.0223
ALA 1090.0318
ASP 1100.0058
ALA 1110.0085
ALA 1120.0159
PRO 1130.0102
THR 1140.0103
VAL 1150.0066
SER 1160.0095
ILE 1170.0098
PHE 1180.0103
PRO 1190.0114
PRO 1200.0092
SER 1210.0049
SER 1220.0073
GLU 1230.0169
GLN 1240.0133
LEU 1250.0194
THR 1260.0315
SER 1270.0557
GLY 1280.0321
GLY 1290.0220
ALA 1300.0144
SER 1310.0088
VAL 1320.0087
VAL 1330.0084
CYS 1340.0066
PHE 1350.0061
LEU 1360.0062
ASN 1370.0050
ASN 1380.0064
PHE 1390.0070
TYR 1400.0061
PRO 1410.0064
LYS 1420.0062
ASP 1430.0061
ILE 1440.0087
ASN 1450.0127
VAL 1460.0099
LYS 1470.0076
TRP 1480.0071
LYS 1490.0123
ILE 1500.0130
ASP 1510.0145
GLY 1520.0221
SER 1530.0223
GLU 1540.0170
ARG 1550.0162
GLN 1560.0093
ASN 1570.0115
GLY 1580.0025
VAL 1590.0067
LEU 1600.0110
ASN 1610.0186
SER 1620.0166
TRP 1630.0133
THR 1640.0069
ASP 1650.0065
GLN 1660.0086
ASP 1670.0293
SER 1680.0187
LYS 1690.0292
ASP 1700.0196
SER 1710.0136
THR 1720.0162
TYR 1730.0080
SER 1740.0056
MET 1750.0079
SER 1760.0106
SER 1770.0093
THR 1780.0088
LEU 1790.0023
THR 1800.0019
LEU 1810.0019
THR 1820.0268
LYS 1830.0290
ASP 1840.0325
GLU 1850.0087
TYR 1860.0019
GLU 1870.0121
ARG 1880.0089
HIS 1890.0089
ASN 1900.0085
SER 1910.0082
TYR 1920.0082
THR 1930.0112
CYS 1940.0094
GLU 1950.0055
ALA 1960.0069
THR 1970.0143
HIS 1980.0125
LYS 1990.0138
THR 2000.0206
SER 2010.0135
THR 2020.0269
SER 2030.0293
PRO 2040.0176
ILE 2050.0132
VAL 2060.0088
LYS 2070.0087
SER 2080.0115
PHE 2090.0109
ASN 2100.0110
ARG 2110.0118
ASN 2120.0444
GLU 2130.0270
CYS 2140.0133

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.