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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 104  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0629
ILE 4210.0281
PHE 4220.0081
ILE 4230.0272
SER 4240.0175
ASN 4250.0075
ASP 4260.0080
LYS 4270.0098
GLU 4280.0113
SER 4290.0106
ILE 4300.0093
LYS 4310.0089
CYS 4320.0087
PRO 4330.0093
CYS 4340.0101
GLU 4350.0111
PRO 4360.0117
GLU 4370.0173
ARG 4380.0155
ILE 4390.0191
SER 4400.0149
GLU 4410.0293
SER 4420.0288
THR 4430.0147
CYS 4440.0161
ASN 4450.0191
PHE 4460.0080
TYR 4470.0116
VAL 4480.0156
CYS 4490.0094
ASN 4500.0093
CYS 4510.0108
VAL 4520.0163
GLU 4530.0212
LYS 4540.0464
GLU 10.0188
VAL 20.0190
GLN 30.0342
LEU 40.0122
VAL 50.0118
GLU 60.0052
SER 70.0086
GLY 80.0102
GLY 90.0088
GLY 100.0109
LEU 110.0119
VAL 120.0128
LYS 130.0089
PRO 140.0138
GLY 150.0152
GLY 160.0092
SER 170.0097
LEU 180.0103
LYS 190.0065
LEU 200.0046
SER 210.0038
CYS 220.0052
ALA 230.0112
ALA 240.0149
SER 250.0245
GLY 260.0205
PHE 270.0210
ILE 280.0207
PHE 290.0163
SER 300.0133
ASP 310.0112
TYR 320.0078
TYR 330.0085
MET 340.0074
TYR 350.0064
TRP 360.0048
VAL 370.0054
ARG 380.0068
GLN 390.0051
THR 400.0176
PRO 410.0430
GLU 420.0147
LYS 430.0267
ARG 440.0203
LEU 450.0125
GLU 460.0073
TRP 470.0038
VAL 480.0035
ALA 490.0046
THR 500.0082
ILE 510.0123
SER 520.0121
ASP 520.0227
GLY 530.0267
ASN 540.0305
SER 550.0261
TYR 560.0189
THR 570.0135
TYR 580.0043
TYR 590.0044
VAL 600.0066
ASP 610.0185
SER 620.0213
VAL 630.0125
LYS 640.0057
GLY 650.0112
ARG 660.0118
PHE 670.0064
THR 680.0071
ILE 690.0072
SER 700.0120
ARG 710.0080
ASP 720.0052
ASN 730.0132
ALA 740.0332
LYS 750.0189
ASN 760.0070
ASN 770.0065
LEU 780.0069
TYR 790.0037
LEU 800.0018
GLN 810.0019
MET 820.0077
SER 820.0078
SER 820.0096
LEU 820.0095
LYS 830.0128
SER 840.0148
GLU 850.0099
ASP 860.0030
THR 870.0075
ALA 880.0055
ILE 890.0056
TYR 900.0051
TYR 910.0055
CYS 920.0040
ALA 930.0050
ARG 940.0055
ASP 950.0076
GLY 960.0045
PRO 970.0128
THR 980.0285
ASP 990.0260
SER 1000.0039
SER 1000.0050
GLY 1000.0060
TYR 1000.0046
GLY 1000.0065
GLY 1000.0052
PHE 1000.0059
GLY 1010.0043
TYR 1020.0054
TRP 1030.0020
GLY 1040.0012
GLN 1050.0044
GLY 1060.0080
THR 1070.0060
LEU 1080.0044
VAL 1090.0080
THR 1100.0104
VAL 1110.0106
SER 1120.0152
GLU 1130.0112
ALA 1140.0101
LYS 1150.0299
THR 1160.0240
THR 1170.0111
PRO 1180.0070
PRO 1190.0059
SER 1200.0074
VAL 1210.0101
TYR 1220.0099
PRO 1230.0183
LEU 1240.0083
ALA 1250.0089
PRO 1260.0101
GLY 1270.0019
SER 1280.0110
ALA 1290.0251
ALA 1300.0110
GLN 1330.0249
THR 1340.0073
ASN 1350.0222
SER 1360.0075
MET 1370.0099
VAL 1380.0136
THR 1390.0061
LEU 1400.0047
GLY 1410.0060
CYS 1420.0087
LEU 1430.0046
VAL 1440.0033
LYS 1450.0096
GLY 1460.0091
TYR 1470.0091
PHE 1480.0087
PRO 1490.0076
GLU 1500.0075
PRO 1510.0090
VAL 1520.0029
THR 1530.0035
VAL 1540.0062
THR 1560.0099
TRP 1570.0084
ASN 1620.0131
SER 1630.0212
GLY 1640.0197
SER 1650.0163
LEU 1660.0154
SER 1670.0134
SER 1680.0144
GLY 1690.0141
VAL 1710.0061
HIS 1720.0050
THR 1730.0053
PHE 1740.0082
PRO 1750.0092
ALA 1760.0091
VAL 1770.0117
LEU 1780.0115
GLN 1790.0178
SER 1800.0292
ASP 1830.0173
LEU 1840.0164
TYR 1850.0129
THR 1860.0085
LEU 1870.0075
SER 1880.0070
SER 1890.0027
SER 1900.0019
VAL 1910.0034
THR 1920.0049
VAL 1930.0031
PRO 1940.0036
SER 1950.0097
SER 1960.0201
PRO 1980.0120
ARG 1990.0058
PRO 2000.0047
SER 2020.0114
GLU 2030.0119
THR 2040.0080
VAL 2050.0109
THR 2060.0110
CYS 2080.0082
ASN 2090.0056
VAL 2100.0076
ALA 2110.0042
HIS 2120.0047
PRO 2130.0180
ALA 2140.0197
SER 2150.0174
SER 2160.0306
THR 2170.0025
LYS 2180.0210
VAL 2190.0221
ASP 2200.0105
LYS 2210.0161
LYS 2220.0177
ILE 2230.0155
VAL 2260.0145
PRO 2270.0142
ARG 2280.0149
ASP 2320.0232
CYS 2330.0277
SER 20.0127
VAL 30.0102
LEU 40.0098
SER 50.0142
GLN 60.0013
SER 70.0137
PRO 80.0558
ALA 90.0598
ILE 100.0612
LEU 110.0252
SER 120.0158
ALA 130.0116
SER 140.0166
PRO 150.0186
GLY 160.0177
GLU 170.0150
LYS 180.0113
VAL 190.0156
THR 200.0163
MET 210.0086
THR 220.0053
CYS 230.0102
ARG 240.0131
ALA 250.0107
ARG 260.0210
SER 270.0195
SER 290.0174
VAL 300.0139
SER 310.0204
TYR 320.0037
MET 330.0035
HIS 340.0032
TRP 350.0056
TYR 360.0057
GLN 370.0065
GLN 380.0083
LYS 390.0133
SER 400.0173
GLY 410.0241
SER 420.0163
SER 430.0064
PRO 440.0029
LYS 450.0038
PRO 460.0031
TRP 470.0040
ILE 480.0008
HIS 490.0019
ALA 500.0067
THR 510.0074
SER 520.0085
ASN 530.0113
LEU 540.0105
ALA 550.0103
SER 560.0321
GLY 570.0192
VAL 580.0242
PRO 590.0215
ALA 600.0204
ARG 610.0097
PHE 620.0034
SER 630.0033
GLY 640.0031
SER 650.0154
GLY 660.0272
SER 670.0377
GLY 680.0270
THR 690.0171
SER 700.0237
TYR 710.0089
SER 720.0096
LEU 730.0084
THR 740.0089
ILE 750.0057
SER 760.0050
ARG 770.0125
VAL 780.0148
GLU 790.0130
ALA 800.0154
GLU 810.0150
ASP 820.0146
ALA 830.0106
ALA 840.0112
THR 850.0119
TYR 860.0079
TYR 870.0083
CYS 880.0092
GLN 890.0070
GLN 900.0087
TRP 910.0101
SER 920.0093
SER 930.0090
HIS 940.0127
PRO 950.0111
PRO 960.0110
THR 970.0111
PHE 980.0075
GLY 990.0097
SER 1000.0122
GLY 1010.0143
THR 1020.0151
LYS 1030.0235
LEU 1040.0092
GLU 1050.0077
ILE 1060.0100
LYS 1070.0109
ARG 1080.0100
ALA 1090.0143
ASP 1100.0117
ALA 1110.0131
ALA 1120.0152
PRO 1130.0089
THR 1140.0061
VAL 1150.0052
SER 1160.0063
ILE 1170.0067
PHE 1180.0067
PRO 1190.0114
PRO 1200.0094
SER 1210.0018
SER 1220.0067
GLU 1230.0194
GLN 1240.0149
LEU 1250.0247
THR 1260.0393
SER 1270.0629
GLY 1280.0331
GLY 1290.0224
ALA 1300.0179
SER 1310.0085
VAL 1320.0076
VAL 1330.0073
CYS 1340.0015
PHE 1350.0017
LEU 1360.0021
ASN 1370.0072
ASN 1380.0084
PHE 1390.0069
TYR 1400.0066
PRO 1410.0053
LYS 1420.0053
ASP 1430.0094
ILE 1440.0079
ASN 1450.0080
VAL 1460.0055
LYS 1470.0044
TRP 1480.0039
LYS 1490.0083
ILE 1500.0110
ASP 1510.0150
GLY 1520.0194
SER 1530.0252
GLU 1540.0113
ARG 1550.0107
GLN 1560.0098
ASN 1570.0184
GLY 1580.0073
VAL 1590.0136
LEU 1600.0198
ASN 1610.0154
SER 1620.0135
TRP 1630.0126
THR 1640.0075
ASP 1650.0079
GLN 1660.0063
ASP 1670.0068
SER 1680.0233
LYS 1690.0208
ASP 1700.0057
SER 1710.0062
THR 1720.0026
TYR 1730.0043
SER 1740.0056
MET 1750.0064
SER 1760.0087
SER 1770.0084
THR 1780.0090
LEU 1790.0061
THR 1800.0063
LEU 1810.0050
THR 1820.0266
LYS 1830.0318
ASP 1840.0321
GLU 1850.0104
TYR 1860.0054
GLU 1870.0145
ARG 1880.0128
HIS 1890.0121
ASN 1900.0106
SER 1910.0071
TYR 1920.0051
THR 1930.0073
CYS 1940.0060
GLU 1950.0044
ALA 1960.0028
THR 1970.0066
HIS 1980.0071
LYS 1990.0067
THR 2000.0165
SER 2010.0084
THR 2020.0205
SER 2030.0251
PRO 2040.0101
ILE 2050.0085
VAL 2060.0043
LYS 2070.0053
SER 2080.0074
PHE 2090.0091
ASN 2100.0086
ARG 2110.0093
ASN 2120.0377
GLU 2130.0139
CYS 2140.0129

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.