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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 105  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0766
ILE 4210.0275
PHE 4220.0061
ILE 4230.0178
SER 4240.0110
ASN 4250.0082
ASP 4260.0132
LYS 4270.0100
GLU 4280.0087
SER 4290.0099
ILE 4300.0072
LYS 4310.0070
CYS 4320.0068
PRO 4330.0050
CYS 4340.0069
GLU 4350.0088
PRO 4360.0074
GLU 4370.0110
ARG 4380.0100
ILE 4390.0149
SER 4400.0120
GLU 4410.0186
SER 4420.0255
THR 4430.0092
CYS 4440.0145
ASN 4450.0168
PHE 4460.0078
TYR 4470.0057
VAL 4480.0091
CYS 4490.0063
ASN 4500.0065
CYS 4510.0039
VAL 4520.0028
GLU 4530.0029
LYS 4540.0080
GLU 10.0242
VAL 20.0226
GLN 30.0296
LEU 40.0158
VAL 50.0185
GLU 60.0128
SER 70.0152
GLY 80.0108
GLY 90.0023
GLY 100.0132
LEU 110.0149
VAL 120.0151
LYS 130.0179
PRO 140.0104
GLY 150.0182
GLY 160.0032
SER 170.0029
LEU 180.0038
LYS 190.0073
LEU 200.0064
SER 210.0085
CYS 220.0078
ALA 230.0130
ALA 240.0149
SER 250.0231
GLY 260.0204
PHE 270.0215
ILE 280.0166
PHE 290.0130
SER 300.0119
ASP 310.0138
TYR 320.0094
TYR 330.0080
MET 340.0058
TYR 350.0061
TRP 360.0054
VAL 370.0080
ARG 380.0073
GLN 390.0067
THR 400.0136
PRO 410.0289
GLU 420.0146
LYS 430.0184
ARG 440.0123
LEU 450.0112
GLU 460.0076
TRP 470.0060
VAL 480.0046
ALA 490.0046
THR 500.0067
ILE 510.0096
SER 520.0099
ASP 520.0217
GLY 530.0259
ASN 540.0286
SER 550.0239
TYR 560.0173
THR 570.0128
TYR 580.0050
TYR 590.0042
VAL 600.0045
ASP 610.0048
SER 620.0039
VAL 630.0031
LYS 640.0015
GLY 650.0043
ARG 660.0053
PHE 670.0022
THR 680.0011
ILE 690.0028
SER 700.0050
ARG 710.0037
ASP 720.0050
ASN 730.0141
ALA 740.0284
LYS 750.0223
ASN 760.0071
ASN 770.0053
LEU 780.0044
TYR 790.0046
LEU 800.0044
GLN 810.0049
MET 820.0017
SER 820.0039
SER 820.0067
LEU 820.0060
LYS 830.0108
SER 840.0139
GLU 850.0107
ASP 860.0055
THR 870.0126
ALA 880.0061
ILE 890.0063
TYR 900.0070
TYR 910.0081
CYS 920.0051
ALA 930.0063
ARG 940.0073
ASP 950.0090
GLY 960.0083
PRO 970.0085
THR 980.0145
ASP 990.0121
SER 1000.0035
SER 1000.0032
GLY 1000.0026
TYR 1000.0021
GLY 1000.0027
GLY 1000.0031
PHE 1000.0046
GLY 1010.0046
TYR 1020.0063
TRP 1030.0064
GLY 1040.0087
GLN 1050.0133
GLY 1060.0137
THR 1070.0084
LEU 1080.0043
VAL 1090.0093
THR 1100.0131
VAL 1110.0117
SER 1120.0167
GLU 1130.0113
ALA 1140.0230
LYS 1150.0485
THR 1160.0173
THR 1170.0054
PRO 1180.0212
PRO 1190.0175
SER 1200.0205
VAL 1210.0089
TYR 1220.0076
PRO 1230.0152
LEU 1240.0070
ALA 1250.0058
PRO 1260.0059
GLY 1270.0163
SER 1280.0243
ALA 1290.0766
ALA 1300.0421
GLN 1330.0671
THR 1340.0307
ASN 1350.0433
SER 1360.0214
MET 1370.0150
VAL 1380.0209
THR 1390.0100
LEU 1400.0089
GLY 1410.0100
CYS 1420.0099
LEU 1430.0043
VAL 1440.0066
LYS 1450.0151
GLY 1460.0137
TYR 1470.0098
PHE 1480.0019
PRO 1490.0043
GLU 1500.0091
PRO 1510.0108
VAL 1520.0122
THR 1530.0129
VAL 1540.0119
THR 1560.0166
TRP 1570.0163
ASN 1620.0209
SER 1630.0299
GLY 1640.0146
SER 1650.0323
LEU 1660.0194
SER 1670.0427
SER 1680.0210
GLY 1690.0200
VAL 1710.0284
HIS 1720.0157
THR 1730.0157
PHE 1740.0206
PRO 1750.0304
ALA 1760.0237
VAL 1770.0196
LEU 1780.0113
GLN 1790.0361
SER 1800.0313
ASP 1830.0185
LEU 1840.0128
TYR 1850.0086
THR 1860.0151
LEU 1870.0143
SER 1880.0122
SER 1890.0111
SER 1900.0135
VAL 1910.0170
THR 1920.0087
VAL 1930.0071
PRO 1940.0067
SER 1950.0241
SER 1960.0311
PRO 1980.0199
ARG 1990.0132
PRO 2000.0097
SER 2020.0185
GLU 2030.0249
THR 2040.0086
VAL 2050.0132
THR 2060.0172
CYS 2080.0153
ASN 2090.0062
VAL 2100.0067
ALA 2110.0179
HIS 2120.0175
PRO 2130.0176
ALA 2140.0101
SER 2150.0261
SER 2160.0385
THR 2170.0303
LYS 2180.0249
VAL 2190.0096
ASP 2200.0162
LYS 2210.0187
LYS 2220.0215
ILE 2230.0181
VAL 2260.0180
PRO 2270.0213
ARG 2280.0185
ASP 2320.0414
CYS 2330.0481
SER 20.0053
VAL 30.0073
LEU 40.0074
SER 50.0101
GLN 60.0117
SER 70.0134
PRO 80.0164
ALA 90.0166
ILE 100.0138
LEU 110.0097
SER 120.0073
ALA 130.0060
SER 140.0092
PRO 150.0083
GLY 160.0095
GLU 170.0042
LYS 180.0035
VAL 190.0041
THR 200.0058
MET 210.0078
THR 220.0077
CYS 230.0082
ARG 240.0075
ALA 250.0076
ARG 260.0042
SER 270.0056
SER 290.0056
VAL 300.0078
SER 310.0101
TYR 320.0078
MET 330.0075
HIS 340.0070
TRP 350.0041
TYR 360.0049
GLN 370.0066
GLN 380.0087
LYS 390.0117
SER 400.0134
GLY 410.0340
SER 420.0197
SER 430.0142
PRO 440.0059
LYS 450.0045
PRO 460.0078
TRP 470.0081
ILE 480.0052
HIS 490.0058
ALA 500.0079
THR 510.0089
SER 520.0070
ASN 530.0037
LEU 540.0040
ALA 550.0084
SER 560.0274
GLY 570.0173
VAL 580.0209
PRO 590.0203
ALA 600.0189
ARG 610.0093
PHE 620.0031
SER 630.0048
GLY 640.0077
SER 650.0093
GLY 660.0067
SER 670.0090
GLY 680.0073
THR 690.0032
SER 700.0035
TYR 710.0060
SER 720.0057
LEU 730.0063
THR 740.0095
ILE 750.0059
SER 760.0074
ARG 770.0112
VAL 780.0070
GLU 790.0059
ALA 800.0117
GLU 810.0131
ASP 820.0134
ALA 830.0075
ALA 840.0049
THR 850.0049
TYR 860.0054
TYR 870.0060
CYS 880.0060
GLN 890.0055
GLN 900.0045
TRP 910.0026
SER 920.0030
SER 930.0020
HIS 940.0020
PRO 950.0021
PRO 960.0028
THR 970.0031
PHE 980.0080
GLY 990.0085
SER 1000.0093
GLY 1010.0093
THR 1020.0082
LYS 1030.0060
LEU 1040.0063
GLU 1050.0071
ILE 1060.0061
LYS 1070.0185
ARG 1080.0183
ALA 1090.0179
ASP 1100.0090
ALA 1110.0130
ALA 1120.0118
PRO 1130.0045
THR 1140.0046
VAL 1150.0061
SER 1160.0081
ILE 1170.0066
PHE 1180.0060
PRO 1190.0039
PRO 1200.0057
SER 1210.0085
SER 1220.0229
GLU 1230.0199
GLN 1240.0109
LEU 1250.0056
THR 1260.0062
SER 1270.0257
GLY 1280.0194
GLY 1290.0110
ALA 1300.0048
SER 1310.0049
VAL 1320.0042
VAL 1330.0032
CYS 1340.0046
PHE 1350.0045
LEU 1360.0031
ASN 1370.0061
ASN 1380.0067
PHE 1390.0092
TYR 1400.0108
PRO 1410.0091
LYS 1420.0135
ASP 1430.0162
ILE 1440.0076
ASN 1450.0079
VAL 1460.0079
LYS 1470.0081
TRP 1480.0072
LYS 1490.0078
ILE 1500.0046
ASP 1510.0064
GLY 1520.0225
SER 1530.0149
GLU 1540.0118
ARG 1550.0156
GLN 1560.0081
ASN 1570.0068
GLY 1580.0163
VAL 1590.0161
LEU 1600.0197
ASN 1610.0195
SER 1620.0219
TRP 1630.0243
THR 1640.0205
ASP 1650.0154
GLN 1660.0078
ASP 1670.0087
SER 1680.0213
LYS 1690.0332
ASP 1700.0105
SER 1710.0086
THR 1720.0146
TYR 1730.0082
SER 1740.0045
MET 1750.0027
SER 1760.0076
SER 1770.0074
THR 1780.0066
LEU 1790.0037
THR 1800.0028
LEU 1810.0033
THR 1820.0220
LYS 1830.0186
ASP 1840.0246
GLU 1850.0045
TYR 1860.0037
GLU 1870.0089
ARG 1880.0122
HIS 1890.0054
ASN 1900.0044
SER 1910.0034
TYR 1920.0022
THR 1930.0043
CYS 1940.0077
GLU 1950.0057
ALA 1960.0023
THR 1970.0069
HIS 1980.0111
LYS 1990.0259
THR 2000.0215
SER 2010.0033
THR 2020.0289
SER 2030.0128
PRO 2040.0071
ILE 2050.0070
VAL 2060.0133
LYS 2070.0100
SER 2080.0083
PHE 2090.0096
ASN 2100.0120
ARG 2110.0111
ASN 2120.0383
GLU 2130.0081
CYS 2140.0335

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.