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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 106  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0694
ILE 4210.0263
PHE 4220.0078
ILE 4230.0153
SER 4240.0111
ASN 4250.0083
ASP 4260.0186
LYS 4270.0114
GLU 4280.0121
SER 4290.0156
ILE 4300.0137
LYS 4310.0042
CYS 4320.0037
PRO 4330.0047
CYS 4340.0045
GLU 4350.0049
PRO 4360.0087
GLU 4370.0092
ARG 4380.0079
ILE 4390.0088
SER 4400.0046
GLU 4410.0109
SER 4420.0086
THR 4430.0097
CYS 4440.0084
ASN 4450.0032
PHE 4460.0073
TYR 4470.0102
VAL 4480.0091
CYS 4490.0088
ASN 4500.0087
CYS 4510.0122
VAL 4520.0121
GLU 4530.0105
LYS 4540.0308
GLU 10.0187
VAL 20.0150
GLN 30.0132
LEU 40.0109
VAL 50.0127
GLU 60.0119
SER 70.0148
GLY 80.0112
GLY 90.0081
GLY 100.0086
LEU 110.0105
VAL 120.0110
LYS 130.0139
PRO 140.0218
GLY 150.0285
GLY 160.0176
SER 170.0152
LEU 180.0133
LYS 190.0110
LEU 200.0086
SER 210.0087
CYS 220.0092
ALA 230.0090
ALA 240.0084
SER 250.0135
GLY 260.0126
PHE 270.0152
ILE 280.0123
PHE 290.0091
SER 300.0097
ASP 310.0105
TYR 320.0060
TYR 330.0029
MET 340.0041
TYR 350.0039
TRP 360.0038
VAL 370.0142
ARG 380.0148
GLN 390.0143
THR 400.0318
PRO 410.0694
GLU 420.0342
LYS 430.0573
ARG 440.0313
LEU 450.0198
GLU 460.0154
TRP 470.0118
VAL 480.0083
ALA 490.0082
THR 500.0092
ILE 510.0127
SER 520.0136
ASP 520.0097
GLY 530.0210
ASN 540.0348
SER 550.0276
TYR 560.0223
THR 570.0216
TYR 580.0083
TYR 590.0069
VAL 600.0089
ASP 610.0142
SER 620.0178
VAL 630.0089
LYS 640.0049
GLY 650.0054
ARG 660.0038
PHE 670.0059
THR 680.0059
ILE 690.0077
SER 700.0086
ARG 710.0088
ASP 720.0078
ASN 730.0263
ALA 740.0309
LYS 750.0291
ASN 760.0103
ASN 770.0084
LEU 780.0079
TYR 790.0034
LEU 800.0037
GLN 810.0079
MET 820.0107
SER 820.0115
SER 820.0116
LEU 820.0079
LYS 830.0091
SER 840.0109
GLU 850.0178
ASP 860.0145
THR 870.0169
ALA 880.0102
ILE 890.0070
TYR 900.0090
TYR 910.0088
CYS 920.0081
ALA 930.0081
ARG 940.0050
ASP 950.0052
GLY 960.0089
PRO 970.0282
THR 980.0393
ASP 990.0363
SER 1000.0074
SER 1000.0037
GLY 1000.0044
TYR 1000.0040
GLY 1000.0067
GLY 1000.0062
PHE 1000.0074
GLY 1010.0076
TYR 1020.0096
TRP 1030.0116
GLY 1040.0126
GLN 1050.0137
GLY 1060.0092
THR 1070.0081
LEU 1080.0039
VAL 1090.0062
THR 1100.0056
VAL 1110.0058
SER 1120.0200
GLU 1130.0227
ALA 1140.0190
LYS 1150.0208
THR 1160.0143
THR 1170.0099
PRO 1180.0023
PRO 1190.0017
SER 1200.0017
VAL 1210.0038
TYR 1220.0029
PRO 1230.0011
LEU 1240.0021
ALA 1250.0039
PRO 1260.0066
GLY 1270.0094
SER 1280.0078
ALA 1290.0056
ALA 1300.0105
GLN 1330.0170
THR 1340.0086
ASN 1350.0052
SER 1360.0055
MET 1370.0048
VAL 1380.0041
THR 1390.0046
LEU 1400.0029
GLY 1410.0027
CYS 1420.0031
LEU 1430.0032
VAL 1440.0035
LYS 1450.0059
GLY 1460.0077
TYR 1470.0088
PHE 1480.0038
PRO 1490.0032
GLU 1500.0029
PRO 1510.0037
VAL 1520.0018
THR 1530.0044
VAL 1540.0056
THR 1560.0020
TRP 1570.0025
ASN 1620.0111
SER 1630.0159
GLY 1640.0103
SER 1650.0030
LEU 1660.0056
SER 1670.0145
SER 1680.0062
GLY 1690.0052
VAL 1710.0066
HIS 1720.0066
THR 1730.0058
PHE 1740.0046
PRO 1750.0045
ALA 1760.0047
VAL 1770.0085
LEU 1780.0103
GLN 1790.0116
SER 1800.0346
ASP 1830.0353
LEU 1840.0259
TYR 1850.0121
THR 1860.0048
LEU 1870.0044
SER 1880.0044
SER 1890.0030
SER 1900.0035
VAL 1910.0039
THR 1920.0037
VAL 1930.0031
PRO 1940.0027
SER 1950.0071
SER 1960.0058
PRO 1980.0034
ARG 1990.0031
PRO 2000.0028
SER 2020.0039
GLU 2030.0034
THR 2040.0016
VAL 2050.0026
THR 2060.0029
CYS 2080.0034
ASN 2090.0035
VAL 2100.0048
ALA 2110.0012
HIS 2120.0019
PRO 2130.0061
ALA 2140.0060
SER 2150.0030
SER 2160.0087
THR 2170.0040
LYS 2180.0025
VAL 2190.0048
ASP 2200.0066
LYS 2210.0036
LYS 2220.0041
ILE 2230.0042
VAL 2260.0109
PRO 2270.0119
ARG 2280.0107
ASP 2320.0216
CYS 2330.0175
SER 20.0210
VAL 30.0252
LEU 40.0240
SER 50.0251
GLN 60.0192
SER 70.0171
PRO 80.0423
ALA 90.0385
ILE 100.0476
LEU 110.0213
SER 120.0171
ALA 130.0128
SER 140.0059
PRO 150.0084
GLY 160.0112
GLU 170.0131
LYS 180.0106
VAL 190.0156
THR 200.0182
MET 210.0176
THR 220.0189
CYS 230.0212
ARG 240.0233
ALA 250.0253
ARG 260.0333
SER 270.0168
SER 290.0209
VAL 300.0204
SER 310.0261
TYR 320.0070
MET 330.0058
HIS 340.0066
TRP 350.0076
TYR 360.0084
GLN 370.0094
GLN 380.0166
LYS 390.0194
SER 400.0210
GLY 410.0679
SER 420.0325
SER 430.0142
PRO 440.0085
LYS 450.0087
PRO 460.0110
TRP 470.0060
ILE 480.0069
HIS 490.0088
ALA 500.0116
THR 510.0101
SER 520.0137
ASN 530.0233
LEU 540.0237
ALA 550.0232
SER 560.0489
GLY 570.0384
VAL 580.0401
PRO 590.0302
ALA 600.0294
ARG 610.0152
PHE 620.0054
SER 630.0061
GLY 640.0040
SER 650.0178
GLY 660.0247
SER 670.0360
GLY 680.0277
THR 690.0169
SER 700.0215
TYR 710.0080
SER 720.0113
LEU 730.0134
THR 740.0111
ILE 750.0059
SER 760.0057
ARG 770.0097
VAL 780.0073
GLU 790.0088
ALA 800.0141
GLU 810.0142
ASP 820.0142
ALA 830.0085
ALA 840.0110
THR 850.0100
TYR 860.0094
TYR 870.0088
CYS 880.0132
GLN 890.0092
GLN 900.0116
TRP 910.0115
SER 920.0139
SER 930.0103
HIS 940.0092
PRO 950.0090
PRO 960.0126
THR 970.0147
PHE 980.0108
GLY 990.0102
SER 1000.0108
GLY 1010.0188
THR 1020.0020
LYS 1030.0174
LEU 1040.0028
GLU 1050.0081
ILE 1060.0045
LYS 1070.0062
ARG 1080.0105
ALA 1090.0145
ASP 1100.0055
ALA 1110.0066
ALA 1120.0127
PRO 1130.0117
THR 1140.0121
VAL 1150.0113
SER 1160.0081
ILE 1170.0064
PHE 1180.0051
PRO 1190.0055
PRO 1200.0064
SER 1210.0049
SER 1220.0102
GLU 1230.0092
GLN 1240.0100
LEU 1250.0145
THR 1260.0155
SER 1270.0205
GLY 1280.0095
GLY 1290.0080
ALA 1300.0101
SER 1310.0067
VAL 1320.0041
VAL 1330.0014
CYS 1340.0054
PHE 1350.0066
LEU 1360.0086
ASN 1370.0076
ASN 1380.0076
PHE 1390.0067
TYR 1400.0027
PRO 1410.0047
LYS 1420.0027
ASP 1430.0123
ILE 1440.0111
ASN 1450.0135
VAL 1460.0067
LYS 1470.0088
TRP 1480.0108
LYS 1490.0131
ILE 1500.0110
ASP 1510.0106
GLY 1520.0288
SER 1530.0246
GLU 1540.0128
ARG 1550.0151
GLN 1560.0141
ASN 1570.0157
GLY 1580.0172
VAL 1590.0115
LEU 1600.0108
ASN 1610.0025
SER 1620.0026
TRP 1630.0043
THR 1640.0062
ASP 1650.0068
GLN 1660.0071
ASP 1670.0177
SER 1680.0205
LYS 1690.0307
ASP 1700.0147
SER 1710.0075
THR 1720.0104
TYR 1730.0066
SER 1740.0055
MET 1750.0044
SER 1760.0035
SER 1770.0013
THR 1780.0055
LEU 1790.0131
THR 1800.0130
LEU 1810.0125
THR 1820.0115
LYS 1830.0090
ASP 1840.0093
GLU 1850.0070
TYR 1860.0045
GLU 1870.0090
ARG 1880.0127
HIS 1890.0085
ASN 1900.0046
SER 1910.0065
TYR 1920.0071
THR 1930.0080
CYS 1940.0060
GLU 1950.0064
ALA 1960.0095
THR 1970.0137
HIS 1980.0130
LYS 1990.0125
THR 2000.0249
SER 2010.0178
THR 2020.0287
SER 2030.0255
PRO 2040.0106
ILE 2050.0058
VAL 2060.0037
LYS 2070.0060
SER 2080.0053
PHE 2090.0045
ASN 2100.0050
ARG 2110.0068
ASN 2120.0150
GLU 2130.0134
CYS 2140.0148

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.