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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

CA strain for 2608162333311823063

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ILE 421PHE 422 0.0002
PHE 422ILE 423 -0.0003
ILE 423SER 424 -0.0049
SER 424ASN 425 -0.0005
ASN 425ASP 426 0.0004
ASP 426LYS 427 -0.0332
LYS 427GLU 428 -0.0001
GLU 428SER 429 0.0000
SER 429ILE 430 0.0044
ILE 430LYS 431 0.0000
LYS 431CYS 432 -0.0002
CYS 432PRO 433 0.0175
PRO 433CYS 434 0.0002
CYS 434GLU 435 -0.0000
GLU 435PRO 436 -0.0001
PRO 436GLU 437 -0.0000
GLU 437ARG 438 0.0002
ARG 438ILE 439 -0.0192
ILE 439SER 440 -0.0000
SER 440GLU 441 0.0000
GLU 441SER 442 0.0125
SER 442THR 443 0.0001
THR 443CYS 444 0.0000
CYS 444ASN 445 -0.0121
ASN 445PHE 446 -0.0003
PHE 446TYR 447 0.0002
TYR 447VAL 448 0.0371
VAL 448CYS 449 -0.0003
CYS 449ASN 450 0.0002
ASN 450CYS 451 0.0259
CYS 451VAL 452 -0.0002
VAL 452GLU 453 -0.0001
GLU 453LYS 454 0.0123
LYS 454GLU 1 0.0017
GLU 1VAL 2 0.0003
VAL 2GLN 3 -0.0004
GLN 3LEU 4 0.0069
LEU 4VAL 5 -0.0000
VAL 5GLU 6 -0.0002
GLU 6SER 7 0.0377
SER 7GLY 8 0.0002
GLY 8GLY 9 -0.0005
GLY 9GLY 10 -0.0126
GLY 10LEU 11 -0.0003
LEU 11VAL 12 0.0002
VAL 12LYS 13 0.0155
LYS 13PRO 14 0.0003
PRO 14GLY 15 0.0002
GLY 15GLY 16 0.0652
GLY 16SER 17 -0.0001
SER 17LEU 18 -0.0001
LEU 18LYS 19 -0.0733
LYS 19LEU 20 -0.0002
LEU 20SER 21 0.0002
SER 21CYS 22 0.0172
CYS 22ALA 23 -0.0001
ALA 23ALA 24 0.0003
ALA 24SER 25 0.0083
SER 25GLY 26 0.0002
GLY 26PHE 27 -0.0003
PHE 27ILE 28 0.0133
ILE 28PHE 29 -0.0002
PHE 29SER 30 -0.0000
SER 30ASP 31 -0.0386
ASP 31TYR 32 -0.0003
TYR 32TYR 33 0.0001
TYR 33MET 34 -0.0262
MET 34TYR 35 -0.0001
TYR 35TRP 36 0.0001
TRP 36VAL 37 -0.0312
VAL 37ARG 38 0.0002
ARG 38GLN 39 -0.0002
GLN 39THR 40 -0.0250
THR 40PRO 41 -0.0003
PRO 41GLU 42 0.0001
GLU 42LYS 43 0.0184
LYS 43ARG 44 -0.0003
ARG 44LEU 45 -0.0004
LEU 45GLU 46 -0.0944
GLU 46TRP 47 0.0001
TRP 47VAL 48 -0.0001
VAL 48ALA 49 -0.0276
ALA 49THR 50 0.0001
THR 50ILE 51 0.0001
ILE 51SER 52 -0.0211
SER 52ASP 52 -0.0004
ASP 52GLY 53 0.0000
GLY 53ASN 54 0.0002
ASN 54SER 55 -0.0128
SER 55TYR 56 0.0001
TYR 56THR 57 0.0005
THR 57TYR 58 -0.0047
TYR 58TYR 59 -0.0003
TYR 59VAL 60 0.0000
VAL 60ASP 61 -0.0060
ASP 61SER 62 -0.0001
SER 62VAL 63 -0.0002
VAL 63LYS 64 0.0032
LYS 64GLY 65 0.0002
GLY 65ARG 66 0.0002
ARG 66PHE 67 0.0115
PHE 67THR 68 0.0002
THR 68ILE 69 0.0000
ILE 69SER 70 0.0402
SER 70ARG 71 -0.0002
ARG 71ASP 72 -0.0003
ASP 72ASN 73 -0.0053
ASN 73ALA 74 0.0001
ALA 74LYS 75 -0.0001
LYS 75ASN 76 -0.0064
ASN 76ASN 77 -0.0003
ASN 77LEU 78 0.0001
LEU 78TYR 79 -0.0128
TYR 79LEU 80 -0.0001
LEU 80GLN 81 0.0001
GLN 81MET 82 -0.0127
MET 82SER 82 0.0001
SER 82SER 82 -0.0001
SER 82LEU 82 0.0003
LEU 82LYS 83 0.0002
LYS 83SER 84 -0.0001
SER 84GLU 85 0.0545
GLU 85ASP 86 -0.0002
ASP 86THR 87 -0.0004
THR 87ALA 88 -0.0053
ALA 88ILE 89 -0.0001
ILE 89TYR 90 -0.0001
TYR 90TYR 91 0.0448
TYR 91CYS 92 -0.0002
CYS 92ALA 93 0.0002
ALA 93ARG 94 0.0308
ARG 94ASP 95 -0.0001
ASP 95GLY 96 -0.0004
GLY 96PRO 97 0.0141
PRO 97THR 98 -0.0001
THR 98ASP 99 -0.0002
ASP 99SER 100 0.0255
SER 100SER 100 0.0003
SER 100GLY 100 -0.0005
GLY 100TYR 100 -0.0000
TYR 100GLY 100 -0.0000
GLY 100GLY 100 -0.0001
GLY 100PHE 100 0.0002
PHE 100GLY 101 0.0002
GLY 101TYR 102 -0.0001
TYR 102TRP 103 0.0277
TRP 103GLY 104 -0.0003
GLY 104GLN 105 0.0000
GLN 105GLY 106 0.0488
GLY 106THR 107 0.0003
THR 107LEU 108 0.0001
LEU 108VAL 109 0.0021
VAL 109THR 110 -0.0002
THR 110VAL 111 0.0000
VAL 111SER 112 0.0811
SER 112GLU 113 0.0001
GLU 113ALA 114 0.0000
ALA 114LYS 115 -0.0127
LYS 115THR 116 0.0001
THR 116THR 117 0.0002
THR 117PRO 118 0.0838
PRO 118PRO 119 0.0001
PRO 119SER 120 0.0001
SER 120VAL 121 0.1172
VAL 121TYR 122 -0.0001
TYR 122PRO 123 -0.0001
PRO 123LEU 124 0.0286
LEU 124ALA 125 0.0000
ALA 125PRO 126 -0.0004
PRO 126GLY 127 0.0125
GLY 127SER 128 0.0001
SER 128ALA 129 -0.0002
ALA 129ALA 130 -0.0808
ALA 130GLN 133 0.0118
GLN 133THR 134 -0.0002
THR 134ASN 135 -0.0000
ASN 135SER 136 0.0261
SER 136MET 137 -0.0001
MET 137VAL 138 -0.0003
VAL 138THR 139 -0.0233
THR 139LEU 140 0.0003
LEU 140GLY 141 0.0000
GLY 141CYS 142 -0.0133
CYS 142LEU 143 -0.0003
LEU 143VAL 144 0.0002
VAL 144LYS 145 -0.0180
LYS 145GLY 146 0.0001
GLY 146TYR 147 -0.0001
TYR 147PHE 148 0.0350
PHE 148PRO 149 -0.0001
PRO 149GLU 150 0.0004
GLU 150PRO 151 -0.1253
PRO 151VAL 152 0.0002
VAL 152THR 153 0.0002
THR 153VAL 154 -0.1046
VAL 154THR 156 -0.0779
THR 156TRP 157 -0.0001
TRP 157ASN 162 0.0198
ASN 162SER 163 -0.0001
SER 163GLY 164 0.0002
GLY 164SER 165 -0.0350
SER 165LEU 166 0.0002
LEU 166SER 167 0.0002
SER 167SER 168 0.0138
SER 168GLY 169 -0.0003
GLY 169VAL 171 -0.1254
VAL 171HIS 172 0.0002
HIS 172THR 173 -0.0001
THR 173PHE 174 -0.0993
PHE 174PRO 175 0.0000
PRO 175ALA 176 0.0001
ALA 176VAL 177 -0.0148
VAL 177LEU 178 -0.0001
LEU 178GLN 179 -0.0000
GLN 179SER 180 0.0131
SER 180ASP 183 -0.0441
ASP 183LEU 184 0.0000
LEU 184TYR 185 -0.0001
TYR 185THR 186 -0.0964
THR 186LEU 187 0.0001
LEU 187SER 188 -0.0001
SER 188SER 189 -0.1138
SER 189SER 190 0.0002
SER 190VAL 191 -0.0002
VAL 191THR 192 -0.0842
THR 192VAL 193 0.0001
VAL 193PRO 194 0.0000
PRO 194SER 195 -0.0293
SER 195SER 196 0.0000
SER 196PRO 198 -0.0005
PRO 198ARG 199 0.0004
ARG 199PRO 200 -0.0002
PRO 200SER 202 0.0088
SER 202GLU 203 0.0001
GLU 203THR 204 -0.0002
THR 204VAL 205 0.0028
VAL 205THR 206 0.0004
THR 206CYS 208 -0.0311
CYS 208ASN 209 -0.0001
ASN 209VAL 210 0.0001
VAL 210ALA 211 -0.0318
ALA 211HIS 212 0.0002
HIS 212PRO 213 -0.0001
PRO 213ALA 214 -0.0490
ALA 214SER 215 0.0004
SER 215SER 216 -0.0001
SER 216THR 217 0.0726
THR 217LYS 218 -0.0001
LYS 218VAL 219 0.0002
VAL 219ASP 220 0.1139
ASP 220LYS 221 -0.0002
LYS 221LYS 222 -0.0001
LYS 222ILE 223 0.0406
ILE 223VAL 226 0.0093
VAL 226PRO 227 0.0001
PRO 227ARG 228 -0.0000
ARG 228ASP 232 -0.0503
ASP 232CYS 233 -0.0000
CYS 233SER 2 0.0197
SER 2VAL 3 0.0000
VAL 3LEU 4 0.0000
LEU 4SER 5 -0.0168
SER 5GLN 6 -0.0002
GLN 6SER 7 0.0004
SER 7PRO 8 0.0001
PRO 8ALA 9 -0.0000
ALA 9ILE 10 0.0002
ILE 10LEU 11 -0.0276
LEU 11SER 12 -0.0001
SER 12ALA 13 0.0002
ALA 13SER 14 -0.0258
SER 14PRO 15 0.0001
PRO 15GLY 16 0.0001
GLY 16GLU 17 0.0108
GLU 17LYS 18 0.0002
LYS 18VAL 19 -0.0004
VAL 19THR 20 0.0452
THR 20MET 21 -0.0001
MET 21THR 22 -0.0004
THR 22CYS 23 0.0200
CYS 23ARG 24 -0.0002
ARG 24ALA 25 0.0000
ALA 25ARG 26 -0.0103
ARG 26SER 27 -0.0004
SER 27SER 29 -0.0209
SER 29VAL 30 -0.0003
VAL 30SER 31 0.0001
SER 31TYR 32 -0.0227
TYR 32MET 33 -0.0001
MET 33HIS 34 0.0003
HIS 34TRP 35 -0.0423
TRP 35TYR 36 -0.0002
TYR 36GLN 37 0.0002
GLN 37GLN 38 0.0211
GLN 38LYS 39 0.0002
LYS 39SER 40 -0.0002
SER 40GLY 41 -0.0953
GLY 41SER 42 -0.0001
SER 42SER 43 0.0001
SER 43PRO 44 0.0264
PRO 44LYS 45 0.0000
LYS 45PRO 46 -0.0000
PRO 46TRP 47 -0.0191
TRP 47ILE 48 -0.0002
ILE 48HIS 49 0.0004
HIS 49ALA 50 -0.0181
ALA 50THR 51 -0.0002
THR 51SER 52 0.0000
SER 52ASN 53 -0.0122
ASN 53LEU 54 0.0000
LEU 54ALA 55 0.0002
ALA 55SER 56 0.0256
SER 56GLY 57 -0.0003
GLY 57VAL 58 0.0000
VAL 58PRO 59 -0.0207
PRO 59ALA 60 -0.0001
ALA 60ARG 61 0.0004
ARG 61PHE 62 0.0183
PHE 62SER 63 0.0004
SER 63GLY 64 -0.0003
GLY 64SER 65 -0.0035
SER 65GLY 66 -0.0001
GLY 66SER 67 -0.0002
SER 67GLY 68 -0.0012
GLY 68THR 69 0.0001
THR 69SER 70 -0.0001
SER 70TYR 71 0.0079
TYR 71SER 72 -0.0002
SER 72LEU 73 0.0001
LEU 73THR 74 0.0516
THR 74ILE 75 0.0000
ILE 75SER 76 0.0001
SER 76ARG 77 0.0391
ARG 77VAL 78 0.0003
VAL 78GLU 79 -0.0002
GLU 79ALA 80 0.0974
ALA 80GLU 81 0.0001
GLU 81ASP 82 -0.0002
ASP 82ALA 83 0.0070
ALA 83ALA 84 -0.0001
ALA 84THR 85 0.0001
THR 85TYR 86 -0.0499
TYR 86TYR 87 0.0002
TYR 87CYS 88 0.0002
CYS 88GLN 89 -0.1000
GLN 89GLN 90 0.0002
GLN 90TRP 91 0.0005
TRP 91SER 92 0.0033
SER 92SER 93 0.0002
SER 93HIS 94 0.0001
HIS 94PRO 95 0.0197
PRO 95PRO 96 0.0002
PRO 96THR 97 0.0001
THR 97PHE 98 -0.0618
PHE 98GLY 99 0.0000
GLY 99SER 100 -0.0001
SER 100GLY 101 -0.0746
GLY 101THR 102 0.0002
THR 102LYS 103 -0.0002
LYS 103LEU 104 -0.0279
LEU 104GLU 105 0.0000
GLU 105ILE 106 -0.0000
ILE 106LYS 107 -0.1675
LYS 107ARG 108 0.0000
ARG 108ALA 109 0.0001
ALA 109ASP 110 -0.1750
ASP 110ALA 111 -0.0001
ALA 111ALA 112 -0.0000
ALA 112PRO 113 -0.1209
PRO 113THR 114 -0.0002
THR 114VAL 115 0.0002
VAL 115SER 116 -0.1724
SER 116ILE 117 -0.0004
ILE 117PHE 118 0.0001
PHE 118PRO 119 -0.0371
PRO 119PRO 120 0.0001
PRO 120SER 121 0.0003
SER 121SER 122 -0.0462
SER 122GLU 123 0.0001
GLU 123GLN 124 0.0004
GLN 124LEU 125 0.0095
LEU 125THR 126 -0.0001
THR 126SER 127 -0.0002
SER 127GLY 128 -0.0050
GLY 128GLY 129 -0.0002
GLY 129ALA 130 0.0002
ALA 130SER 131 0.0304
SER 131VAL 132 0.0002
VAL 132VAL 133 -0.0002
VAL 133CYS 134 -0.0383
CYS 134PHE 135 0.0003
PHE 135LEU 136 -0.0001
LEU 136ASN 137 -0.0333
ASN 137ASN 138 0.0001
ASN 138PHE 139 -0.0001
PHE 139TYR 140 -0.0204
TYR 140PRO 141 -0.0004
PRO 141LYS 142 0.0002
LYS 142ASP 143 -0.0947
ASP 143ILE 144 0.0002
ILE 144ASN 145 -0.0001
ASN 145VAL 146 0.0389
VAL 146LYS 147 -0.0001
LYS 147TRP 148 0.0001
TRP 148LYS 149 -0.0085
LYS 149ILE 150 -0.0000
ILE 150ASP 151 0.0001
ASP 151GLY 152 0.0090
GLY 152SER 153 0.0000
SER 153GLU 154 0.0003
GLU 154ARG 155 -0.0084
ARG 155GLN 156 -0.0002
GLN 156ASN 157 -0.0001
ASN 157GLY 158 -0.1520
GLY 158VAL 159 -0.0002
VAL 159LEU 160 -0.0001
LEU 160ASN 161 0.1346
ASN 161SER 162 -0.0003
SER 162TRP 163 0.0001
TRP 163THR 164 0.0285
THR 164ASP 165 0.0001
ASP 165GLN 166 -0.0003
GLN 166ASP 167 0.0446
ASP 167SER 168 0.0000
SER 168LYS 169 0.0003
LYS 169ASP 170 -0.0751
ASP 170SER 171 0.0001
SER 171THR 172 -0.0003
THR 172TYR 173 0.0407
TYR 173SER 174 0.0001
SER 174MET 175 -0.0001
MET 175SER 176 0.1495
SER 176SER 177 0.0000
SER 177THR 178 -0.0001
THR 178LEU 179 0.0767
LEU 179THR 180 0.0001
THR 180LEU 181 -0.0001
LEU 181THR 182 0.0503
THR 182LYS 183 -0.0001
LYS 183ASP 184 -0.0002
ASP 184GLU 185 -0.0238
GLU 185TYR 186 -0.0001
TYR 186GLU 187 0.0000
GLU 187ARG 188 0.0017
ARG 188HIS 189 -0.0002
HIS 189ASN 190 0.0002
ASN 190SER 191 -0.0642
SER 191TYR 192 0.0003
TYR 192THR 193 -0.0002
THR 193CYS 194 -0.0857
CYS 194GLU 195 0.0000
GLU 195ALA 196 -0.0001
ALA 196THR 197 -0.0164
THR 197HIS 198 0.0000
HIS 198LYS 199 -0.0000
LYS 199THR 200 0.0186
THR 200SER 201 -0.0002
SER 201THR 202 0.0001
THR 202SER 203 -0.0077
SER 203PRO 204 0.0001
PRO 204ILE 205 -0.0003
ILE 205VAL 206 -0.2442
VAL 206LYS 207 0.0000
LYS 207SER 208 0.0000
SER 208PHE 209 -0.2159
PHE 209ASN 210 -0.0001
ASN 210ARG 211 -0.0001
ARG 211ASN 212 -0.0238
ASN 212GLU 213 -0.0001
GLU 213CYS 214 0.0001

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.