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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 11  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0377
ILE 4210.0052
PHE 4220.0044
ILE 4230.0058
SER 4240.0079
ASN 4250.0102
ASP 4260.0107
LYS 4270.0088
GLU 4280.0096
SER 4290.0085
ILE 4300.0066
LYS 4310.0077
CYS 4320.0069
PRO 4330.0082
CYS 4340.0083
GLU 4350.0083
PRO 4360.0064
GLU 4370.0049
ARG 4380.0061
ILE 4390.0061
SER 4400.0100
GLU 4410.0122
SER 4420.0183
THR 4430.0185
CYS 4440.0154
ASN 4450.0109
PHE 4460.0084
TYR 4470.0062
VAL 4480.0041
CYS 4490.0039
ASN 4500.0039
CYS 4510.0055
VAL 4520.0048
GLU 4530.0060
LYS 4540.0058
GLU 10.0170
VAL 20.0151
GLN 30.0159
LEU 40.0145
VAL 50.0152
GLU 60.0143
SER 70.0134
GLY 80.0108
GLY 90.0107
GLY 100.0065
LEU 110.0086
VAL 120.0042
LYS 130.0052
PRO 140.0074
GLY 150.0072
GLY 160.0060
SER 170.0076
LEU 180.0085
LYS 190.0123
LEU 200.0130
SER 210.0139
CYS 220.0148
ALA 230.0159
ALA 240.0154
SER 250.0164
GLY 260.0161
PHE 270.0144
ILE 280.0138
PHE 290.0140
SER 300.0132
ASP 310.0115
TYR 320.0112
TYR 330.0111
MET 340.0118
TYR 350.0116
TRP 360.0123
VAL 370.0115
ARG 380.0122
GLN 390.0124
THR 400.0116
PRO 410.0130
GLU 420.0117
LYS 430.0117
ARG 440.0115
LEU 450.0108
GLU 460.0119
TRP 470.0117
VAL 480.0120
ALA 490.0122
THR 500.0116
ILE 510.0120
SER 520.0113
ASP 520.0119
GLY 530.0123
ASN 540.0132
SER 550.0132
TYR 560.0118
THR 570.0124
TYR 580.0116
TYR 590.0124
VAL 600.0124
ASP 610.0153
SER 620.0150
VAL 630.0143
LYS 640.0147
GLY 650.0145
ARG 660.0138
PHE 670.0133
THR 680.0132
ILE 690.0130
SER 700.0132
ARG 710.0141
ASP 720.0154
ASN 730.0154
ALA 740.0170
LYS 750.0176
ASN 760.0160
ASN 770.0156
LEU 780.0143
TYR 790.0142
LEU 800.0132
GLN 810.0123
MET 820.0119
SER 820.0111
SER 820.0112
LEU 820.0112
LYS 830.0129
SER 840.0135
GLU 850.0151
ASP 860.0140
THR 870.0134
ALA 880.0132
ILE 890.0129
TYR 900.0133
TYR 910.0124
CYS 920.0122
ALA 930.0118
ARG 940.0110
ASP 950.0094
GLY 960.0097
PRO 970.0090
THR 980.0067
ASP 990.0058
SER 1000.0070
SER 1000.0065
GLY 1000.0054
TYR 1000.0055
GLY 1000.0067
GLY 1000.0082
PHE 1000.0098
GLY 1010.0099
TYR 1020.0115
TRP 1030.0109
GLY 1040.0123
GLN 1050.0135
GLY 1060.0151
THR 1070.0115
LEU 1080.0108
VAL 1090.0105
THR 1100.0108
VAL 1110.0096
SER 1120.0126
GLU 1130.0121
ALA 1140.0185
LYS 1150.0204
THR 1160.0230
THR 1170.0248
PRO 1180.0270
PRO 1190.0242
SER 1200.0218
VAL 1210.0195
TYR 1220.0131
PRO 1230.0082
LEU 1240.0042
ALA 1250.0041
PRO 1260.0117
GLY 1270.0167
SER 1280.0276
ALA 1290.0315
ALA 1300.0274
GLN 1330.0296
THR 1340.0323
ASN 1350.0372
SER 1360.0355
MET 1370.0295
VAL 1380.0213
THR 1390.0165
LEU 1400.0111
GLY 1410.0116
CYS 1420.0137
LEU 1430.0145
VAL 1440.0196
LYS 1450.0198
GLY 1460.0210
TYR 1470.0242
PHE 1480.0243
PRO 1490.0250
GLU 1500.0264
PRO 1510.0304
VAL 1520.0303
THR 1530.0327
VAL 1540.0270
THR 1560.0283
TRP 1570.0229
ASN 1620.0232
SER 1630.0309
GLY 1640.0334
SER 1650.0300
LEU 1660.0277
SER 1670.0338
SER 1680.0345
GLY 1690.0296
VAL 1710.0232
HIS 1720.0230
THR 1730.0223
PHE 1740.0209
PRO 1750.0238
ALA 1760.0219
VAL 1770.0228
LEU 1780.0234
GLN 1790.0209
SER 1800.0217
ASP 1830.0230
LEU 1840.0226
TYR 1850.0229
THR 1860.0202
LEU 1870.0200
SER 1880.0167
SER 1890.0191
SER 1900.0180
VAL 1910.0192
THR 1920.0224
VAL 1930.0227
PRO 1940.0265
SER 1950.0242
SER 1960.0230
PRO 1980.0166
ARG 1990.0122
PRO 2000.0086
SER 2020.0087
GLU 2030.0073
THR 2040.0078
VAL 2050.0109
THR 2060.0158
CYS 2080.0193
ASN 2090.0261
VAL 2100.0285
ALA 2110.0328
HIS 2120.0320
PRO 2130.0364
ALA 2140.0339
SER 2150.0320
SER 2160.0360
THR 2170.0334
LYS 2180.0338
VAL 2190.0290
ASP 2200.0240
LYS 2210.0173
LYS 2220.0122
ILE 2230.0053
VAL 2260.0074
PRO 2270.0114
ARG 2280.0159
ASP 2320.0262
CYS 2330.0338
SER 20.0094
VAL 30.0109
LEU 40.0111
SER 50.0123
GLN 60.0121
SER 70.0128
PRO 80.0128
ALA 90.0123
ILE 100.0104
LEU 110.0091
SER 120.0071
ALA 130.0067
SER 140.0052
PRO 150.0058
GLY 160.0066
GLU 170.0074
LYS 180.0091
VAL 190.0096
THR 200.0109
MET 210.0113
THR 220.0118
CYS 230.0111
ARG 240.0111
ALA 250.0104
ARG 260.0108
SER 270.0090
SER 290.0077
VAL 300.0074
SER 310.0062
TYR 320.0068
MET 330.0083
HIS 340.0088
TRP 350.0092
TYR 360.0095
GLN 370.0101
GLN 380.0096
LYS 390.0087
SER 400.0086
GLY 410.0113
SER 420.0103
SER 430.0101
PRO 440.0104
LYS 450.0098
PRO 460.0098
TRP 470.0094
ILE 480.0089
HIS 490.0083
ALA 500.0075
THR 510.0083
SER 520.0084
ASN 530.0083
LEU 540.0090
ALA 550.0089
SER 560.0086
GLY 570.0098
VAL 580.0101
PRO 590.0108
ALA 600.0108
ARG 610.0104
PHE 620.0104
SER 630.0101
GLY 640.0099
SER 650.0094
GLY 660.0092
SER 670.0083
GLY 680.0083
THR 690.0096
SER 700.0103
TYR 710.0099
SER 720.0104
LEU 730.0104
THR 740.0110
ILE 750.0101
SER 760.0099
ARG 770.0085
VAL 780.0080
GLU 790.0079
ALA 800.0063
GLU 810.0087
ASP 820.0092
ALA 830.0088
ALA 840.0087
THR 850.0093
TYR 860.0100
TYR 870.0099
CYS 880.0095
GLN 890.0099
GLN 900.0082
TRP 910.0071
SER 920.0060
SER 930.0064
HIS 940.0078
PRO 950.0087
PRO 960.0089
THR 970.0101
PHE 980.0094
GLY 990.0100
SER 1000.0114
GLY 1010.0118
THR 1020.0106
LYS 1030.0092
LEU 1040.0100
GLU 1050.0074
ILE 1060.0058
LYS 1070.0071
ARG 1080.0091
ALA 1090.0120
ASP 1100.0162
ALA 1110.0161
ALA 1120.0194
PRO 1130.0213
THR 1140.0197
VAL 1150.0187
SER 1160.0161
ILE 1170.0127
PHE 1180.0073
PRO 1190.0045
PRO 1200.0043
SER 1210.0081
SER 1220.0154
GLU 1230.0182
GLN 1240.0166
LEU 1250.0179
THR 1260.0258
SER 1270.0276
GLY 1280.0237
GLY 1290.0173
ALA 1300.0094
SER 1310.0075
VAL 1320.0059
VAL 1330.0107
CYS 1340.0157
PHE 1350.0173
LEU 1360.0208
ASN 1370.0205
ASN 1380.0193
PHE 1390.0199
TYR 1400.0177
PRO 1410.0189
LYS 1420.0212
ASP 1430.0275
ILE 1440.0278
ASN 1450.0303
VAL 1460.0267
LYS 1470.0257
TRP 1480.0201
LYS 1490.0198
ILE 1500.0135
ASP 1510.0177
GLY 1520.0234
SER 1530.0268
GLU 1540.0228
ARG 1550.0231
GLN 1560.0190
ASN 1570.0228
GLY 1580.0174
VAL 1590.0175
LEU 1600.0196
ASN 1610.0218
SER 1620.0222
TRP 1630.0234
THR 1640.0179
ASP 1650.0149
GLN 1660.0141
ASP 1670.0148
SER 1680.0116
LYS 1690.0098
ASP 1700.0124
SER 1710.0122
THR 1720.0158
TYR 1730.0188
SER 1740.0204
MET 1750.0219
SER 1760.0196
SER 1770.0184
THR 1780.0144
LEU 1790.0123
THR 1800.0116
LEU 1810.0086
THR 1820.0143
LYS 1830.0151
ASP 1840.0165
GLU 1850.0089
TYR 1860.0074
GLU 1870.0149
ARG 1880.0136
HIS 1890.0125
ASN 1900.0174
SER 1910.0177
TYR 1920.0137
THR 1930.0190
CYS 1940.0201
GLU 1950.0256
ALA 1960.0276
THR 1970.0309
HIS 1980.0278
LYS 1990.0285
THR 2000.0253
SER 2010.0297
THR 2020.0377
SER 2030.0356
PRO 2040.0319
ILE 2050.0269
VAL 2060.0258
LYS 2070.0208
SER 2080.0183
PHE 2090.0193
ASN 2100.0207
ARG 2110.0171
ASN 2120.0272
GLU 2130.0291
CYS 2140.0296

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.