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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 12  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1126
ILE 4210.0523
PHE 4220.0490
ILE 4230.0451
SER 4240.0455
ASN 4250.0441
ASP 4260.0318
LYS 4270.0186
GLU 4280.0210
SER 4290.0311
ILE 4300.0250
LYS 4310.0230
CYS 4320.0158
PRO 4330.0103
CYS 4340.0063
GLU 4350.0053
PRO 4360.0090
GLU 4370.0161
ARG 4380.0264
ILE 4390.0444
SER 4400.0639
GLU 4410.0864
SER 4420.1126
THR 4430.0960
CYS 4440.0760
ASN 4450.0508
PHE 4460.0450
TYR 4470.0295
VAL 4480.0238
CYS 4490.0153
ASN 4500.0098
CYS 4510.0069
VAL 4520.0103
GLU 4530.0126
LYS 4540.0150
GLU 10.0174
VAL 20.0151
GLN 30.0184
LEU 40.0172
VAL 50.0203
GLU 60.0202
SER 70.0227
GLY 80.0213
GLY 90.0173
GLY 100.0135
LEU 110.0114
VAL 120.0099
LYS 130.0087
PRO 140.0083
GLY 150.0094
GLY 160.0131
SER 170.0154
LEU 180.0173
LYS 190.0214
LEU 200.0201
SER 210.0217
CYS 220.0205
ALA 230.0221
ALA 240.0185
SER 250.0182
GLY 260.0162
PHE 270.0118
ILE 280.0110
PHE 290.0132
SER 300.0126
ASP 310.0066
TYR 320.0070
TYR 330.0085
MET 340.0113
TYR 350.0110
TRP 360.0129
VAL 370.0112
ARG 380.0121
GLN 390.0125
THR 400.0125
PRO 410.0142
GLU 420.0141
LYS 430.0128
ARG 440.0120
LEU 450.0109
GLU 460.0100
TRP 470.0094
VAL 480.0115
ALA 490.0130
THR 500.0119
ILE 510.0143
SER 520.0122
ASP 520.0118
GLY 530.0165
ASN 540.0229
SER 550.0210
TYR 560.0187
THR 570.0184
TYR 580.0137
TYR 590.0134
VAL 600.0110
ASP 610.0100
SER 620.0097
VAL 630.0118
LYS 640.0126
GLY 650.0149
ARG 660.0147
PHE 670.0163
THR 680.0187
ILE 690.0185
SER 700.0210
ARG 710.0208
ASP 720.0240
ASN 730.0217
ALA 740.0261
LYS 750.0269
ASN 760.0214
ASN 770.0220
LEU 780.0196
TYR 790.0211
LEU 800.0189
GLN 810.0200
MET 820.0161
SER 820.0154
SER 820.0133
LEU 820.0123
LYS 830.0102
SER 840.0103
GLU 850.0104
ASP 860.0117
THR 870.0127
ALA 880.0134
ILE 890.0144
TYR 900.0141
TYR 910.0138
CYS 920.0138
ALA 930.0118
ARG 940.0091
ASP 950.0073
GLY 960.0107
PRO 970.0174
THR 980.0183
ASP 990.0182
SER 1000.0134
SER 1000.0094
GLY 1000.0078
TYR 1000.0079
GLY 1000.0052
GLY 1000.0080
PHE 1000.0099
GLY 1010.0115
TYR 1020.0134
TRP 1030.0125
GLY 1040.0149
GLN 1050.0169
GLY 1060.0167
THR 1070.0164
LEU 1080.0142
VAL 1090.0132
THR 1100.0117
VAL 1110.0102
SER 1120.0088
GLU 1130.0101
ALA 1140.0110
LYS 1150.0120
THR 1160.0110
THR 1170.0101
PRO 1180.0092
PRO 1190.0081
SER 1200.0068
VAL 1210.0071
TYR 1220.0062
PRO 1230.0063
LEU 1240.0066
ALA 1250.0071
PRO 1260.0073
GLY 1270.0098
SER 1280.0120
ALA 1290.0114
ALA 1300.0092
GLN 1330.0098
THR 1340.0086
ASN 1350.0085
SER 1360.0073
MET 1370.0071
VAL 1380.0071
THR 1390.0066
LEU 1400.0067
GLY 1410.0068
CYS 1420.0064
LEU 1430.0062
VAL 1440.0076
LYS 1450.0076
GLY 1460.0081
TYR 1470.0090
PHE 1480.0104
PRO 1490.0105
GLU 1500.0107
PRO 1510.0109
VAL 1520.0090
THR 1530.0085
VAL 1540.0098
THR 1560.0108
TRP 1570.0100
ASN 1620.0118
SER 1630.0135
GLY 1640.0137
SER 1650.0136
LEU 1660.0114
SER 1670.0119
SER 1680.0101
GLY 1690.0086
VAL 1710.0087
HIS 1720.0088
THR 1730.0095
PHE 1740.0091
PRO 1750.0102
ALA 1760.0107
VAL 1770.0107
LEU 1780.0111
GLN 1790.0106
SER 1800.0106
ASP 1830.0108
LEU 1840.0102
TYR 1850.0102
THR 1860.0089
LEU 1870.0087
SER 1880.0074
SER 1890.0081
SER 1900.0074
VAL 1910.0075
THR 1920.0076
VAL 1930.0077
PRO 1940.0074
SER 1950.0077
SER 1960.0089
PRO 1980.0095
ARG 1990.0088
PRO 2000.0097
SER 2020.0112
GLU 2030.0116
THR 2040.0113
VAL 2050.0093
THR 2060.0096
CYS 2080.0082
ASN 2090.0097
VAL 2100.0095
ALA 2110.0095
HIS 2120.0100
PRO 2130.0121
ALA 2140.0117
SER 2150.0108
SER 2160.0112
THR 2170.0102
LYS 2180.0105
VAL 2190.0089
ASP 2200.0099
LYS 2210.0083
LYS 2220.0087
ILE 2230.0081
VAL 2260.0096
PRO 2270.0095
ARG 2280.0104
ASP 2320.0141
CYS 2330.0161
SER 20.0078
VAL 30.0103
LEU 40.0125
SER 50.0150
GLN 60.0153
SER 70.0170
PRO 80.0165
ALA 90.0153
ILE 100.0130
LEU 110.0114
SER 120.0086
ALA 130.0077
SER 140.0052
PRO 150.0049
GLY 160.0068
GLU 170.0083
LYS 180.0106
VAL 190.0113
THR 200.0150
MET 210.0149
THR 220.0161
CYS 230.0148
ARG 240.0147
ALA 250.0124
ARG 260.0117
SER 270.0105
SER 290.0101
VAL 300.0093
SER 310.0101
TYR 320.0093
MET 330.0105
HIS 340.0111
TRP 350.0117
TYR 360.0111
GLN 370.0115
GLN 380.0113
LYS 390.0110
SER 400.0115
GLY 410.0146
SER 420.0141
SER 430.0131
PRO 440.0118
LYS 450.0113
PRO 460.0105
TRP 470.0112
ILE 480.0116
HIS 490.0102
ALA 500.0112
THR 510.0120
SER 520.0124
ASN 530.0114
LEU 540.0118
ALA 550.0111
SER 560.0137
GLY 570.0130
VAL 580.0119
PRO 590.0087
ALA 600.0101
ARG 610.0098
PHE 620.0116
SER 630.0128
GLY 640.0136
SER 650.0144
GLY 660.0149
SER 670.0149
GLY 680.0141
THR 690.0140
SER 700.0155
TYR 710.0143
SER 720.0149
LEU 730.0142
THR 740.0135
ILE 750.0109
SER 760.0112
ARG 770.0085
VAL 780.0071
GLU 790.0054
ALA 800.0041
GLU 810.0045
ASP 820.0068
ALA 830.0072
ALA 840.0089
THR 850.0114
TYR 860.0121
TYR 870.0120
CYS 880.0124
GLN 890.0106
GLN 900.0077
TRP 910.0053
SER 920.0051
SER 930.0049
HIS 940.0068
PRO 950.0074
PRO 960.0065
THR 970.0090
PHE 980.0108
GLY 990.0122
SER 1000.0130
GLY 1010.0137
THR 1020.0132
LYS 1030.0113
LEU 1040.0081
GLU 1050.0057
ILE 1060.0043
LYS 1070.0034
ARG 1080.0063
ALA 1090.0098
ASP 1100.0109
ALA 1110.0100
ALA 1120.0096
PRO 1130.0088
THR 1140.0077
VAL 1150.0074
SER 1160.0072
ILE 1170.0073
PHE 1180.0067
PRO 1190.0078
PRO 1200.0075
SER 1210.0077
SER 1220.0093
GLU 1230.0086
GLN 1240.0073
LEU 1250.0089
THR 1260.0099
SER 1270.0087
GLY 1280.0080
GLY 1290.0071
ALA 1300.0075
SER 1310.0066
VAL 1320.0070
VAL 1330.0070
CYS 1340.0068
PHE 1350.0072
LEU 1360.0080
ASN 1370.0079
ASN 1380.0082
PHE 1390.0085
TYR 1400.0087
PRO 1410.0084
LYS 1420.0078
ASP 1430.0109
ILE 1440.0100
ASN 1450.0099
VAL 1460.0114
LYS 1470.0117
TRP 1480.0106
LYS 1490.0131
ILE 1500.0128
ASP 1510.0146
GLY 1520.0168
SER 1530.0161
GLU 1540.0161
ARG 1550.0147
GLN 1560.0130
ASN 1570.0125
GLY 1580.0093
VAL 1590.0093
LEU 1600.0095
ASN 1610.0080
SER 1620.0086
TRP 1630.0094
THR 1640.0083
ASP 1650.0065
GLN 1660.0060
ASP 1670.0059
SER 1680.0059
LYS 1690.0075
ASP 1700.0076
SER 1710.0067
THR 1720.0073
TYR 1730.0074
SER 1740.0075
MET 1750.0076
SER 1760.0082
SER 1770.0080
THR 1780.0071
LEU 1790.0083
THR 1800.0075
LEU 1810.0079
THR 1820.0082
LYS 1830.0093
ASP 1840.0107
GLU 1850.0111
TYR 1860.0106
GLU 1870.0123
ARG 1880.0138
HIS 1890.0139
ASN 1900.0141
SER 1910.0129
TYR 1920.0112
THR 1930.0113
CYS 1940.0097
GLU 1950.0109
ALA 1960.0112
THR 1970.0104
HIS 1980.0106
LYS 1990.0117
THR 2000.0115
SER 2010.0114
THR 2020.0131
SER 2030.0124
PRO 2040.0117
ILE 2050.0100
VAL 2060.0109
LYS 2070.0095
SER 2080.0098
PHE 2090.0112
ASN 2100.0130
ARG 2110.0125
ASN 2120.0155
GLU 2130.0151
CYS 2140.0146

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.