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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 13  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1419
ILE 4210.0249
PHE 4220.0224
ILE 4230.0105
SER 4240.0073
ASN 4250.0247
ASP 4260.0296
LYS 4270.0215
GLU 4280.0252
SER 4290.0249
ILE 4300.0165
LYS 4310.0177
CYS 4320.0115
PRO 4330.0092
CYS 4340.0066
GLU 4350.0056
PRO 4360.0072
GLU 4370.0068
ARG 4380.0186
ILE 4390.0475
SER 4400.0751
GLU 4410.1061
SER 4420.1419
THR 4430.1320
CYS 4440.0950
ASN 4450.0540
PHE 4460.0317
TYR 4470.0096
VAL 4480.0055
CYS 4490.0055
ASN 4500.0074
CYS 4510.0073
VAL 4520.0107
GLU 4530.0139
LYS 4540.0193
GLU 10.0259
VAL 20.0199
GLN 30.0202
LEU 40.0159
VAL 50.0184
GLU 60.0170
SER 70.0164
GLY 80.0174
GLY 90.0171
GLY 100.0142
LEU 110.0132
VAL 120.0151
LYS 130.0151
PRO 140.0160
GLY 150.0173
GLY 160.0168
SER 170.0156
LEU 180.0154
LYS 190.0144
LEU 200.0145
SER 210.0148
CYS 220.0149
ALA 230.0181
ALA 240.0174
SER 250.0215
GLY 260.0236
PHE 270.0209
ILE 280.0208
PHE 290.0167
SER 300.0163
ASP 310.0149
TYR 320.0106
TYR 330.0068
MET 340.0063
TYR 350.0054
TRP 360.0082
VAL 370.0106
ARG 380.0138
GLN 390.0166
THR 400.0197
PRO 410.0243
GLU 420.0250
LYS 430.0201
ARG 440.0180
LEU 450.0142
GLU 460.0131
TRP 470.0096
VAL 480.0091
ALA 490.0068
THR 500.0042
ILE 510.0054
SER 520.0099
ASP 520.0131
GLY 530.0184
ASN 540.0198
SER 550.0158
TYR 560.0149
THR 570.0108
TYR 580.0082
TYR 590.0091
VAL 600.0121
ASP 610.0140
SER 620.0147
VAL 630.0108
LYS 640.0090
GLY 650.0075
ARG 660.0085
PHE 670.0077
THR 680.0059
ILE 690.0061
SER 700.0056
ARG 710.0099
ASP 720.0144
ASN 730.0178
ALA 740.0219
LYS 750.0216
ASN 760.0189
ASN 770.0156
LEU 780.0111
TYR 790.0110
LEU 800.0099
GLN 810.0103
MET 820.0121
SER 820.0126
SER 820.0132
LEU 820.0142
LYS 830.0150
SER 840.0165
GLU 850.0167
ASP 860.0150
THR 870.0169
ALA 880.0177
ILE 890.0169
TYR 900.0143
TYR 910.0130
CYS 920.0107
ALA 930.0087
ARG 940.0067
ASP 950.0060
GLY 960.0073
PRO 970.0076
THR 980.0074
ASP 990.0076
SER 1000.0069
SER 1000.0061
GLY 1000.0053
TYR 1000.0045
GLY 1000.0044
GLY 1000.0052
PHE 1000.0065
GLY 1010.0074
TYR 1020.0090
TRP 1030.0117
GLY 1040.0143
GLN 1050.0168
GLY 1060.0151
THR 1070.0165
LEU 1080.0171
VAL 1090.0155
THR 1100.0154
VAL 1110.0160
SER 1120.0130
GLU 1130.0105
ALA 1140.0047
LYS 1150.0045
THR 1160.0050
THR 1170.0064
PRO 1180.0075
PRO 1190.0074
SER 1200.0083
VAL 1210.0081
TYR 1220.0072
PRO 1230.0066
LEU 1240.0065
ALA 1250.0065
PRO 1260.0055
GLY 1270.0050
SER 1280.0057
ALA 1290.0069
ALA 1300.0064
GLN 1330.0107
THR 1340.0103
ASN 1350.0082
SER 1360.0112
MET 1370.0097
VAL 1380.0087
THR 1390.0067
LEU 1400.0072
GLY 1410.0072
CYS 1420.0074
LEU 1430.0073
VAL 1440.0081
LYS 1450.0081
GLY 1460.0078
TYR 1470.0068
PHE 1480.0044
PRO 1490.0030
GLU 1500.0031
PRO 1510.0064
VAL 1520.0058
THR 1530.0059
VAL 1540.0096
THR 1560.0115
TRP 1570.0111
ASN 1620.0134
SER 1630.0148
GLY 1640.0157
SER 1650.0170
LEU 1660.0145
SER 1670.0144
SER 1680.0126
GLY 1690.0096
VAL 1710.0084
HIS 1720.0076
THR 1730.0089
PHE 1740.0077
PRO 1750.0081
ALA 1760.0078
VAL 1770.0072
LEU 1780.0066
GLN 1790.0075
SER 1800.0096
ASP 1830.0073
LEU 1840.0073
TYR 1850.0071
THR 1860.0082
LEU 1870.0080
SER 1880.0077
SER 1890.0083
SER 1900.0074
VAL 1910.0085
THR 1920.0092
VAL 1930.0116
PRO 1940.0129
SER 1950.0134
SER 1960.0165
PRO 1980.0151
ARG 1990.0126
PRO 2000.0121
SER 2020.0150
GLU 2030.0157
THR 2040.0138
VAL 2050.0109
THR 2060.0105
CYS 2080.0087
ASN 2090.0094
VAL 2100.0093
ALA 2110.0065
HIS 2120.0069
PRO 2130.0085
ALA 2140.0070
SER 2150.0079
SER 2160.0093
THR 2170.0090
LYS 2180.0086
VAL 2190.0073
ASP 2200.0093
LYS 2210.0079
LYS 2220.0081
ILE 2230.0084
VAL 2260.0086
PRO 2270.0079
ARG 2280.0068
ASP 2320.0096
CYS 2330.0090
SER 20.0111
VAL 30.0127
LEU 40.0125
SER 50.0142
GLN 60.0117
SER 70.0130
PRO 80.0127
ALA 90.0121
ILE 100.0105
LEU 110.0090
SER 120.0091
ALA 130.0109
SER 140.0130
PRO 150.0146
GLY 160.0180
GLU 170.0168
LYS 180.0159
VAL 190.0122
THR 200.0113
MET 210.0098
THR 220.0112
CYS 230.0106
ARG 240.0133
ALA 250.0124
ARG 260.0154
SER 270.0149
SER 290.0124
VAL 300.0097
SER 310.0095
TYR 320.0057
MET 330.0051
HIS 340.0048
TRP 350.0053
TYR 360.0073
GLN 370.0081
GLN 380.0114
LYS 390.0129
SER 400.0166
GLY 410.0204
SER 420.0179
SER 430.0153
PRO 440.0117
LYS 450.0108
PRO 460.0084
TRP 470.0079
ILE 480.0063
HIS 490.0059
ALA 500.0065
THR 510.0067
SER 520.0091
ASN 530.0094
LEU 540.0109
ALA 550.0123
SER 560.0190
GLY 570.0198
VAL 580.0150
PRO 590.0168
ALA 600.0182
ARG 610.0161
PHE 620.0117
SER 630.0114
GLY 640.0090
SER 650.0112
GLY 660.0128
SER 670.0141
GLY 680.0148
THR 690.0143
SER 700.0140
TYR 710.0106
SER 720.0099
LEU 730.0083
THR 740.0108
ILE 750.0119
SER 760.0164
ARG 770.0170
VAL 780.0131
GLU 790.0136
ALA 800.0113
GLU 810.0122
ASP 820.0092
ALA 830.0071
ALA 840.0076
THR 850.0077
TYR 860.0070
TYR 870.0077
CYS 880.0067
GLN 890.0070
GLN 900.0069
TRP 910.0064
SER 920.0072
SER 930.0093
HIS 940.0089
PRO 950.0078
PRO 960.0073
THR 970.0096
PHE 980.0099
GLY 990.0112
SER 1000.0132
GLY 1010.0095
THR 1020.0080
LYS 1030.0075
LEU 1040.0053
GLU 1050.0055
ILE 1060.0076
LYS 1070.0093
ARG 1080.0093
ALA 1090.0092
ASP 1100.0071
ALA 1110.0053
ALA 1120.0042
PRO 1130.0033
THR 1140.0019
VAL 1150.0017
SER 1160.0025
ILE 1170.0024
PHE 1180.0039
PRO 1190.0036
PRO 1200.0051
SER 1210.0064
SER 1220.0075
GLU 1230.0087
GLN 1240.0083
LEU 1250.0080
THR 1260.0099
SER 1270.0109
GLY 1280.0097
GLY 1290.0088
ALA 1300.0069
SER 1310.0063
VAL 1320.0046
VAL 1330.0049
CYS 1340.0038
PHE 1350.0043
LEU 1360.0038
ASN 1370.0039
ASN 1380.0042
PHE 1390.0049
TYR 1400.0066
PRO 1410.0072
LYS 1420.0070
ASP 1430.0079
ILE 1440.0070
ASN 1450.0074
VAL 1460.0057
LYS 1470.0061
TRP 1480.0049
LYS 1490.0053
ILE 1500.0044
ASP 1510.0047
GLY 1520.0073
SER 1530.0074
GLU 1540.0081
ARG 1550.0079
GLN 1560.0078
ASN 1570.0096
GLY 1580.0081
VAL 1590.0071
LEU 1600.0079
ASN 1610.0069
SER 1620.0073
TRP 1630.0064
THR 1640.0040
ASP 1650.0036
GLN 1660.0054
ASP 1670.0071
SER 1680.0101
LYS 1690.0122
ASP 1700.0092
SER 1710.0081
THR 1720.0064
TYR 1730.0051
SER 1740.0051
MET 1750.0056
SER 1760.0060
SER 1770.0059
THR 1780.0064
LEU 1790.0062
THR 1800.0075
LEU 1810.0072
THR 1820.0084
LYS 1830.0071
ASP 1840.0066
GLU 1850.0058
TYR 1860.0042
GLU 1870.0029
ARG 1880.0025
HIS 1890.0023
ASN 1900.0021
SER 1910.0026
TYR 1920.0015
THR 1930.0025
CYS 1940.0029
GLU 1950.0045
ALA 1960.0050
THR 1970.0071
HIS 1980.0071
LYS 1990.0079
THR 2000.0065
SER 2010.0073
THR 2020.0097
SER 2030.0088
PRO 2040.0069
ILE 2050.0044
VAL 2060.0036
LYS 2070.0017
SER 2080.0021
PHE 2090.0024
ASN 2100.0031
ARG 2110.0024
ASN 2120.0050
GLU 2130.0058
CYS 2140.0071

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.