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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 14  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0570
ILE 4210.0163
PHE 4220.0169
ILE 4230.0118
SER 4240.0106
ASN 4250.0126
ASP 4260.0104
LYS 4270.0051
GLU 4280.0047
SER 4290.0068
ILE 4300.0066
LYS 4310.0057
CYS 4320.0082
PRO 4330.0094
CYS 4340.0108
GLU 4350.0110
PRO 4360.0114
GLU 4370.0096
ARG 4380.0077
ILE 4390.0089
SER 4400.0224
GLU 4410.0331
SER 4420.0570
THR 4430.0536
CYS 4440.0370
ASN 4450.0193
PHE 4460.0117
TYR 4470.0046
VAL 4480.0078
CYS 4490.0102
ASN 4500.0134
CYS 4510.0118
VAL 4520.0121
GLU 4530.0102
LYS 4540.0135
GLU 10.0371
VAL 20.0276
GLN 30.0265
LEU 40.0198
VAL 50.0198
GLU 60.0131
SER 70.0145
GLY 80.0131
GLY 90.0070
GLY 100.0090
LEU 110.0105
VAL 120.0189
LYS 130.0283
PRO 140.0334
GLY 150.0381
GLY 160.0314
SER 170.0270
LEU 180.0204
LYS 190.0167
LEU 200.0114
SER 210.0165
CYS 220.0158
ALA 230.0228
ALA 240.0239
SER 250.0294
GLY 260.0336
PHE 270.0279
ILE 280.0264
PHE 290.0219
SER 300.0185
ASP 310.0141
TYR 320.0117
TYR 330.0076
MET 340.0086
TYR 350.0072
TRP 360.0065
VAL 370.0127
ARG 380.0141
GLN 390.0193
THR 400.0230
PRO 410.0289
GLU 420.0328
LYS 430.0258
ARG 440.0230
LEU 450.0193
GLU 460.0174
TRP 470.0138
VAL 480.0091
ALA 490.0046
THR 500.0036
ILE 510.0031
SER 520.0026
ASP 520.0058
GLY 530.0068
ASN 540.0080
SER 550.0066
TYR 560.0036
THR 570.0036
TYR 580.0061
TYR 590.0100
VAL 600.0154
ASP 610.0252
SER 620.0276
VAL 630.0213
LYS 640.0243
GLY 650.0292
ARG 660.0267
PHE 670.0173
THR 680.0164
ILE 690.0111
SER 700.0148
ARG 710.0171
ASP 720.0251
ASN 730.0263
ALA 740.0355
LYS 750.0352
ASN 760.0278
ASN 770.0225
LEU 780.0150
TYR 790.0145
LEU 800.0108
GLN 810.0174
MET 820.0191
SER 820.0280
SER 820.0340
LEU 820.0269
LYS 830.0301
SER 840.0283
GLU 850.0285
ASP 860.0187
THR 870.0149
ALA 880.0150
ILE 890.0137
TYR 900.0091
TYR 910.0115
CYS 920.0094
ALA 930.0131
ARG 940.0125
ASP 950.0138
GLY 960.0173
PRO 970.0137
THR 980.0128
ASP 990.0147
SER 1000.0159
SER 1000.0140
GLY 1000.0128
TYR 1000.0143
GLY 1000.0138
GLY 1000.0151
PHE 1000.0151
GLY 1010.0157
TYR 1020.0160
TRP 1030.0160
GLY 1040.0150
GLN 1050.0172
GLY 1060.0143
THR 1070.0099
LEU 1080.0079
VAL 1090.0040
THR 1100.0091
VAL 1110.0177
SER 1120.0219
GLU 1130.0277
ALA 1140.0189
LYS 1150.0163
THR 1160.0118
THR 1170.0104
PRO 1180.0080
PRO 1190.0039
SER 1200.0037
VAL 1210.0017
TYR 1220.0012
PRO 1230.0022
LEU 1240.0025
ALA 1250.0029
PRO 1260.0034
GLY 1270.0014
SER 1280.0019
ALA 1290.0026
ALA 1300.0046
GLN 1330.0069
THR 1340.0099
ASN 1350.0122
SER 1360.0141
MET 1370.0121
VAL 1380.0090
THR 1390.0060
LEU 1400.0046
GLY 1410.0039
CYS 1420.0037
LEU 1430.0029
VAL 1440.0022
LYS 1450.0020
GLY 1460.0046
TYR 1470.0033
PHE 1480.0050
PRO 1490.0032
GLU 1500.0034
PRO 1510.0064
VAL 1520.0063
THR 1530.0092
VAL 1540.0065
THR 1560.0077
TRP 1570.0083
ASN 1620.0106
SER 1630.0110
GLY 1640.0116
SER 1650.0128
LEU 1660.0111
SER 1670.0114
SER 1680.0115
GLY 1690.0099
VAL 1710.0077
HIS 1720.0081
THR 1730.0077
PHE 1740.0094
PRO 1750.0108
ALA 1760.0095
VAL 1770.0106
LEU 1780.0108
GLN 1790.0132
SER 1800.0151
ASP 1830.0137
LEU 1840.0093
TYR 1850.0064
THR 1860.0056
LEU 1870.0061
SER 1880.0062
SER 1890.0055
SER 1900.0063
VAL 1910.0072
THR 1920.0089
VAL 1930.0109
PRO 1940.0138
SER 1950.0126
SER 1960.0149
PRO 1980.0138
ARG 1990.0108
PRO 2000.0099
SER 2020.0137
GLU 2030.0146
THR 2040.0121
VAL 2050.0089
THR 2060.0080
CYS 2080.0064
ASN 2090.0079
VAL 2100.0067
ALA 2110.0094
HIS 2120.0077
PRO 2130.0111
ALA 2140.0098
SER 2150.0116
SER 2160.0144
THR 2170.0107
LYS 2180.0112
VAL 2190.0090
ASP 2200.0077
LYS 2210.0061
LYS 2220.0074
ILE 2230.0056
VAL 2260.0063
PRO 2270.0046
ARG 2280.0025
ASP 2320.0036
CYS 2330.0039
SER 20.0177
VAL 30.0201
LEU 40.0173
SER 50.0219
GLN 60.0168
SER 70.0192
PRO 80.0242
ALA 90.0222
ILE 100.0190
LEU 110.0211
SER 120.0236
ALA 130.0291
SER 140.0375
PRO 150.0413
GLY 160.0507
GLU 170.0461
LYS 180.0401
VAL 190.0295
THR 200.0211
MET 210.0164
THR 220.0184
CYS 230.0139
ARG 240.0182
ALA 250.0188
ARG 260.0234
SER 270.0199
SER 290.0151
VAL 300.0116
SER 310.0085
TYR 320.0098
MET 330.0092
HIS 340.0094
TRP 350.0079
TYR 360.0120
GLN 370.0120
GLN 380.0166
LYS 390.0197
SER 400.0268
GLY 410.0289
SER 420.0252
SER 430.0219
PRO 440.0187
LYS 450.0167
PRO 460.0145
TRP 470.0115
ILE 480.0072
HIS 490.0103
ALA 500.0086
THR 510.0045
SER 520.0021
ASN 530.0047
LEU 540.0115
ALA 550.0187
SER 560.0300
GLY 570.0357
VAL 580.0266
PRO 590.0342
ALA 600.0348
ARG 610.0331
PHE 620.0193
SER 630.0149
GLY 640.0081
SER 650.0086
GLY 660.0105
SER 670.0109
GLY 680.0134
THR 690.0167
SER 700.0156
TYR 710.0123
SER 720.0114
LEU 730.0085
THR 740.0196
ILE 750.0247
SER 760.0369
ARG 770.0434
VAL 780.0329
GLU 790.0348
ALA 800.0276
GLU 810.0273
ASP 820.0184
ALA 830.0098
ALA 840.0086
THR 850.0089
TYR 860.0068
TYR 870.0108
CYS 880.0099
GLN 890.0131
GLN 900.0128
TRP 910.0128
SER 920.0131
SER 930.0122
HIS 940.0111
PRO 950.0134
PRO 960.0138
THR 970.0145
PHE 980.0157
GLY 990.0140
SER 1000.0153
GLY 1010.0139
THR 1020.0097
LYS 1030.0069
LEU 1040.0072
GLU 1050.0097
ILE 1060.0173
LYS 1070.0243
ARG 1080.0257
ALA 1090.0271
ASP 1100.0185
ALA 1110.0148
ALA 1120.0113
PRO 1130.0038
THR 1140.0048
VAL 1150.0037
SER 1160.0042
ILE 1170.0039
PHE 1180.0035
PRO 1190.0021
PRO 1200.0016
SER 1210.0010
SER 1220.0007
GLU 1230.0012
GLN 1240.0005
LEU 1250.0003
THR 1260.0006
SER 1270.0004
GLY 1280.0012
GLY 1290.0017
ALA 1300.0018
SER 1310.0032
VAL 1320.0035
VAL 1330.0041
CYS 1340.0052
PHE 1350.0050
LEU 1360.0043
ASN 1370.0054
ASN 1380.0059
PHE 1390.0043
TYR 1400.0104
PRO 1410.0122
LYS 1420.0087
ASP 1430.0118
ILE 1440.0094
ASN 1450.0098
VAL 1460.0059
LYS 1470.0067
TRP 1480.0055
LYS 1490.0055
ILE 1500.0046
ASP 1510.0048
GLY 1520.0067
SER 1530.0071
GLU 1540.0074
ARG 1550.0070
GLN 1560.0070
ASN 1570.0077
GLY 1580.0070
VAL 1590.0062
LEU 1600.0071
ASN 1610.0091
SER 1620.0097
TRP 1630.0088
THR 1640.0120
ASP 1650.0112
GLN 1660.0060
ASP 1670.0149
SER 1680.0218
LYS 1690.0287
ASP 1700.0215
SER 1710.0145
THR 1720.0089
TYR 1730.0035
SER 1740.0051
MET 1750.0068
SER 1760.0066
SER 1770.0063
THR 1780.0057
LEU 1790.0045
THR 1800.0042
LEU 1810.0039
THR 1820.0029
LYS 1830.0019
ASP 1840.0026
GLU 1850.0033
TYR 1860.0027
GLU 1870.0024
ARG 1880.0032
HIS 1890.0036
ASN 1900.0035
SER 1910.0035
TYR 1920.0032
THR 1930.0037
CYS 1940.0043
GLU 1950.0055
ALA 1960.0061
THR 1970.0112
HIS 1980.0123
LYS 1990.0176
THR 2000.0180
SER 2010.0196
THR 2020.0248
SER 2030.0151
PRO 2040.0102
ILE 2050.0071
VAL 2060.0048
LYS 2070.0037
SER 2080.0035
PHE 2090.0028
ASN 2100.0031
ARG 2110.0025
ASN 2120.0033
GLU 2130.0028
CYS 2140.0021

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.