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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 15  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0757
ILE 4210.0208
PHE 4220.0167
ILE 4230.0097
SER 4240.0130
ASN 4250.0149
ASP 4260.0121
LYS 4270.0042
GLU 4280.0049
SER 4290.0088
ILE 4300.0061
LYS 4310.0057
CYS 4320.0058
PRO 4330.0049
CYS 4340.0048
GLU 4350.0047
PRO 4360.0072
GLU 4370.0075
ARG 4380.0055
ILE 4390.0146
SER 4400.0266
GLU 4410.0372
SER 4420.0595
THR 4430.0563
CYS 4440.0400
ASN 4450.0183
PHE 4460.0105
TYR 4470.0020
VAL 4480.0065
CYS 4490.0084
ASN 4500.0100
CYS 4510.0117
VAL 4520.0175
GLU 4530.0166
LYS 4540.0757
GLU 10.0098
VAL 20.0078
GLN 30.0067
LEU 40.0048
VAL 50.0045
GLU 60.0036
SER 70.0024
GLY 80.0031
GLY 90.0040
GLY 100.0052
LEU 110.0072
VAL 120.0085
LYS 130.0109
PRO 140.0116
GLY 150.0113
GLY 160.0093
SER 170.0072
LEU 180.0055
LYS 190.0035
LEU 200.0022
SER 210.0007
CYS 220.0021
ALA 230.0030
ALA 240.0040
SER 250.0056
GLY 260.0071
PHE 270.0068
ILE 280.0058
PHE 290.0046
SER 300.0048
ASP 310.0045
TYR 320.0040
TYR 330.0034
MET 340.0027
TYR 350.0020
TRP 360.0019
VAL 370.0037
ARG 380.0047
GLN 390.0063
THR 400.0075
PRO 410.0093
GLU 420.0104
LYS 430.0082
ARG 440.0067
LEU 450.0054
GLU 460.0042
TRP 470.0030
VAL 480.0021
ALA 490.0011
THR 500.0019
ILE 510.0024
SER 520.0032
ASP 520.0028
GLY 530.0027
ASN 540.0029
SER 550.0028
TYR 560.0028
THR 570.0030
TYR 580.0020
TYR 590.0010
VAL 600.0019
ASP 610.0026
SER 620.0047
VAL 630.0035
LYS 640.0027
GLY 650.0041
ARG 660.0049
PHE 670.0031
THR 680.0023
ILE 690.0010
SER 700.0017
ARG 710.0022
ASP 720.0029
ASN 730.0040
ALA 740.0045
LYS 750.0034
ASN 760.0035
ASN 770.0021
LEU 780.0014
TYR 790.0007
LEU 800.0017
GLN 810.0032
MET 820.0047
SER 820.0067
SER 820.0086
LEU 820.0083
LYS 830.0098
SER 840.0108
GLU 850.0099
ASP 860.0074
THR 870.0074
ALA 880.0066
ILE 890.0058
TYR 900.0042
TYR 910.0043
CYS 920.0032
ALA 930.0039
ARG 940.0040
ASP 950.0047
GLY 960.0061
PRO 970.0047
THR 980.0042
ASP 990.0064
SER 1000.0076
SER 1000.0067
GLY 1000.0063
TYR 1000.0055
GLY 1000.0039
GLY 1000.0039
PHE 1000.0039
GLY 1010.0055
TYR 1020.0060
TRP 1030.0055
GLY 1040.0055
GLN 1050.0063
GLY 1060.0044
THR 1070.0041
LEU 1080.0052
VAL 1090.0053
THR 1100.0072
VAL 1110.0089
SER 1120.0110
GLU 1130.0133
ALA 1140.0113
LYS 1150.0101
THR 1160.0082
THR 1170.0070
PRO 1180.0056
PRO 1190.0040
SER 1200.0030
VAL 1210.0020
TYR 1220.0015
PRO 1230.0014
LEU 1240.0018
ALA 1250.0023
PRO 1260.0032
GLY 1270.0038
SER 1280.0048
ALA 1290.0045
ALA 1300.0047
GLN 1330.0052
THR 1340.0054
ASN 1350.0056
SER 1360.0059
MET 1370.0050
VAL 1380.0043
THR 1390.0030
LEU 1400.0024
GLY 1410.0020
CYS 1420.0017
LEU 1430.0020
VAL 1440.0023
LYS 1450.0027
GLY 1460.0040
TYR 1470.0050
PHE 1480.0065
PRO 1490.0064
GLU 1500.0053
PRO 1510.0047
VAL 1520.0038
THR 1530.0030
VAL 1540.0023
THR 1560.0023
TRP 1570.0019
ASN 1620.0019
SER 1630.0023
GLY 1640.0026
SER 1650.0025
LEU 1660.0027
SER 1670.0031
SER 1680.0036
GLY 1690.0034
VAL 1710.0024
HIS 1720.0019
THR 1730.0020
PHE 1740.0015
PRO 1750.0014
ALA 1760.0024
VAL 1770.0040
LEU 1780.0053
GLN 1790.0057
SER 1800.0070
ASP 1830.0077
LEU 1840.0062
TYR 1850.0048
THR 1860.0032
LEU 1870.0027
SER 1880.0021
SER 1890.0020
SER 1900.0022
VAL 1910.0025
THR 1920.0033
VAL 1930.0040
PRO 1940.0051
SER 1950.0053
SER 1960.0054
PRO 1980.0036
ARG 1990.0035
PRO 2000.0033
SER 2020.0034
GLU 2030.0026
THR 2040.0019
VAL 2050.0020
THR 2060.0017
CYS 2080.0018
ASN 2090.0023
VAL 2100.0027
ALA 2110.0040
HIS 2120.0049
PRO 2130.0058
ALA 2140.0067
SER 2150.0067
SER 2160.0065
THR 2170.0051
LYS 2180.0046
VAL 2190.0035
ASP 2200.0025
LYS 2210.0021
LYS 2220.0021
ILE 2230.0021
VAL 2260.0031
PRO 2270.0037
ARG 2280.0038
ASP 2320.0047
CYS 2330.0053
SER 20.0052
VAL 30.0043
LEU 40.0023
SER 50.0028
GLN 60.0044
SER 70.0056
PRO 80.0065
ALA 90.0067
ILE 100.0069
LEU 110.0073
SER 120.0071
ALA 130.0069
SER 140.0067
PRO 150.0066
GLY 160.0068
GLU 170.0073
LYS 180.0071
VAL 190.0070
THR 200.0072
MET 210.0063
THR 220.0051
CYS 230.0034
ARG 240.0014
ALA 250.0023
ARG 260.0051
SER 270.0068
SER 290.0067
VAL 300.0056
SER 310.0072
TYR 320.0060
MET 330.0046
HIS 340.0053
TRP 350.0060
TYR 360.0068
GLN 370.0082
GLN 380.0086
LYS 390.0093
SER 400.0096
GLY 410.0119
SER 420.0106
SER 430.0085
PRO 440.0078
LYS 450.0085
PRO 460.0077
TRP 470.0081
ILE 480.0074
HIS 490.0069
ALA 500.0069
THR 510.0069
SER 520.0086
ASN 530.0091
LEU 540.0099
ALA 550.0099
SER 560.0128
GLY 570.0134
VAL 580.0115
PRO 590.0099
ALA 600.0092
ARG 610.0084
PHE 620.0090
SER 630.0081
GLY 640.0068
SER 650.0077
GLY 660.0064
SER 670.0064
GLY 680.0067
THR 690.0043
SER 700.0040
TYR 710.0043
SER 720.0057
LEU 730.0073
THR 740.0072
ILE 750.0077
SER 760.0077
ARG 770.0074
VAL 780.0073
GLU 790.0080
ALA 800.0066
GLU 810.0071
ASP 820.0074
ALA 830.0071
ALA 840.0077
THR 850.0080
TYR 860.0072
TYR 870.0060
CYS 880.0049
GLN 890.0034
GLN 900.0025
TRP 910.0029
SER 920.0072
SER 930.0085
HIS 940.0078
PRO 950.0057
PRO 960.0021
THR 970.0034
PHE 980.0038
GLY 990.0044
SER 1000.0058
GLY 1010.0070
THR 1020.0070
LYS 1030.0074
LEU 1040.0070
GLU 1050.0063
ILE 1060.0055
LYS 1070.0043
ARG 1080.0015
ALA 1090.0045
ASP 1100.0071
ALA 1110.0062
ALA 1120.0067
PRO 1130.0041
THR 1140.0037
VAL 1150.0030
SER 1160.0025
ILE 1170.0025
PHE 1180.0022
PRO 1190.0029
PRO 1200.0028
SER 1210.0021
SER 1220.0032
GLU 1230.0024
GLN 1240.0023
LEU 1250.0038
THR 1260.0039
SER 1270.0031
GLY 1280.0042
GLY 1290.0039
ALA 1300.0040
SER 1310.0031
VAL 1320.0032
VAL 1330.0028
CYS 1340.0021
PHE 1350.0021
LEU 1360.0025
ASN 1370.0020
ASN 1380.0023
PHE 1390.0033
TYR 1400.0044
PRO 1410.0054
LYS 1420.0053
ASP 1430.0076
ILE 1440.0061
ASN 1450.0057
VAL 1460.0056
LYS 1470.0056
TRP 1480.0049
LYS 1490.0064
ILE 1500.0065
ASP 1510.0066
GLY 1520.0076
SER 1530.0069
GLU 1540.0084
ARG 1550.0080
GLN 1560.0080
ASN 1570.0082
GLY 1580.0049
VAL 1590.0044
LEU 1600.0037
ASN 1610.0016
SER 1620.0016
TRP 1630.0013
THR 1640.0016
ASP 1650.0032
GLN 1660.0027
ASP 1670.0030
SER 1680.0033
LYS 1690.0030
ASP 1700.0008
SER 1710.0013
THR 1720.0018
TYR 1730.0016
SER 1740.0008
MET 1750.0008
SER 1760.0024
SER 1770.0026
THR 1780.0026
LEU 1790.0046
THR 1800.0046
LEU 1810.0054
THR 1820.0065
LYS 1830.0062
ASP 1840.0078
GLU 1850.0081
TYR 1860.0067
GLU 1870.0074
ARG 1880.0088
HIS 1890.0076
ASN 1900.0063
SER 1910.0050
TYR 1920.0046
THR 1930.0045
CYS 1940.0039
GLU 1950.0048
ALA 1960.0058
THR 1970.0070
HIS 1980.0078
LYS 1990.0101
THR 2000.0105
SER 2010.0119
THR 2020.0153
SER 2030.0105
PRO 2040.0077
ILE 2050.0057
VAL 2060.0044
LYS 2070.0029
SER 2080.0024
PHE 2090.0034
ASN 2100.0046
ARG 2110.0050
ASN 2120.0055
GLU 2130.0055
CYS 2140.0054

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.