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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 16  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1011
ILE 4210.0387
PHE 4220.0328
ILE 4230.0191
SER 4240.0204
ASN 4250.0232
ASP 4260.0196
LYS 4270.0077
GLU 4280.0084
SER 4290.0151
ILE 4300.0132
LYS 4310.0111
CYS 4320.0109
PRO 4330.0102
CYS 4340.0097
GLU 4350.0096
PRO 4360.0150
GLU 4370.0167
ARG 4380.0123
ILE 4390.0279
SER 4400.0449
GLU 4410.0612
SER 4420.1011
THR 4430.0993
CYS 4440.0677
ASN 4450.0284
PHE 4460.0131
TYR 4470.0051
VAL 4480.0154
CYS 4490.0156
ASN 4500.0178
CYS 4510.0109
VAL 4520.0122
GLU 4530.0121
LYS 4540.0202
GLU 10.0251
VAL 20.0188
GLN 30.0168
LEU 40.0114
VAL 50.0126
GLU 60.0114
SER 70.0094
GLY 80.0103
GLY 90.0112
GLY 100.0105
LEU 110.0115
VAL 120.0124
LYS 130.0161
PRO 140.0174
GLY 150.0170
GLY 160.0166
SER 170.0143
LEU 180.0124
LYS 190.0106
LEU 200.0088
SER 210.0060
CYS 220.0070
ALA 230.0083
ALA 240.0088
SER 250.0133
GLY 260.0172
PHE 270.0157
ILE 280.0125
PHE 290.0087
SER 300.0093
ASP 310.0097
TYR 320.0079
TYR 330.0060
MET 340.0033
TYR 350.0012
TRP 360.0042
VAL 370.0078
ARG 380.0116
GLN 390.0158
THR 400.0201
PRO 410.0267
GLU 420.0291
LYS 430.0216
ARG 440.0175
LEU 450.0122
GLU 460.0096
TRP 470.0056
VAL 480.0065
ALA 490.0037
THR 500.0031
ILE 510.0049
SER 520.0070
ASP 520.0069
GLY 530.0086
ASN 540.0095
SER 550.0086
TYR 560.0074
THR 570.0061
TYR 580.0060
TYR 590.0060
VAL 600.0067
ASP 610.0106
SER 620.0140
VAL 630.0124
LYS 640.0116
GLY 650.0147
ARG 660.0147
PHE 670.0113
THR 680.0094
ILE 690.0056
SER 700.0054
ARG 710.0033
ASP 720.0034
ASN 730.0058
ALA 740.0060
LYS 750.0033
ASN 760.0052
ASN 770.0026
LEU 780.0015
TYR 790.0047
LEU 800.0074
GLN 810.0103
MET 820.0123
SER 820.0151
SER 820.0178
LEU 820.0173
LYS 830.0194
SER 840.0208
GLU 850.0210
ASP 860.0170
THR 870.0173
ALA 880.0170
ILE 890.0153
TYR 900.0116
TYR 910.0105
CYS 920.0070
ALA 930.0066
ARG 940.0070
ASP 950.0094
GLY 960.0131
PRO 970.0135
THR 980.0129
ASP 990.0179
SER 1000.0173
SER 1000.0153
GLY 1000.0150
TYR 1000.0133
GLY 1000.0092
GLY 1000.0077
PHE 1000.0067
GLY 1010.0110
TYR 1020.0122
TRP 1030.0115
GLY 1040.0128
GLN 1050.0161
GLY 1060.0118
THR 1070.0122
LEU 1080.0135
VAL 1090.0126
THR 1100.0138
VAL 1110.0152
SER 1120.0151
GLU 1130.0186
ALA 1140.0172
LYS 1150.0185
THR 1160.0161
THR 1170.0155
PRO 1180.0127
PRO 1190.0099
SER 1200.0083
VAL 1210.0046
TYR 1220.0030
PRO 1230.0026
LEU 1240.0033
ALA 1250.0030
PRO 1260.0039
GLY 1270.0069
SER 1280.0097
ALA 1290.0091
ALA 1300.0093
GLN 1330.0077
THR 1340.0104
ASN 1350.0141
SER 1360.0143
MET 1370.0125
VAL 1380.0087
THR 1390.0068
LEU 1400.0052
GLY 1410.0051
CYS 1420.0049
LEU 1430.0054
VAL 1440.0069
LYS 1450.0085
GLY 1460.0102
TYR 1470.0111
PHE 1480.0128
PRO 1490.0117
GLU 1500.0100
PRO 1510.0092
VAL 1520.0083
THR 1530.0072
VAL 1540.0084
THR 1560.0095
TRP 1570.0087
ASN 1620.0106
SER 1630.0122
GLY 1640.0134
SER 1650.0128
LEU 1660.0107
SER 1670.0116
SER 1680.0095
GLY 1690.0079
VAL 1710.0060
HIS 1720.0062
THR 1730.0069
PHE 1740.0060
PRO 1750.0062
ALA 1760.0082
VAL 1770.0091
LEU 1780.0108
GLN 1790.0122
SER 1800.0144
ASP 1830.0143
LEU 1840.0131
TYR 1850.0109
THR 1860.0091
LEU 1870.0079
SER 1880.0063
SER 1890.0064
SER 1900.0063
VAL 1910.0065
THR 1920.0098
VAL 1930.0109
PRO 1940.0131
SER 1950.0105
SER 1960.0130
PRO 1980.0129
ARG 1990.0089
PRO 2000.0079
SER 2020.0128
GLU 2030.0148
THR 2040.0116
VAL 2050.0082
THR 2060.0071
CYS 2080.0062
ASN 2090.0074
VAL 2100.0076
ALA 2110.0094
HIS 2120.0110
PRO 2130.0135
ALA 2140.0141
SER 2150.0150
SER 2160.0152
THR 2170.0117
LYS 2180.0100
VAL 2190.0069
ASP 2200.0060
LYS 2210.0043
LYS 2220.0060
ILE 2230.0047
VAL 2260.0061
PRO 2270.0043
ARG 2280.0059
ASP 2320.0120
CYS 2330.0154
SER 20.0169
VAL 30.0156
LEU 40.0108
SER 50.0121
GLN 60.0089
SER 70.0101
PRO 80.0121
ALA 90.0145
ILE 100.0162
LEU 110.0156
SER 120.0173
ALA 130.0179
SER 140.0192
PRO 150.0194
GLY 160.0193
GLU 170.0179
LYS 180.0141
VAL 190.0122
THR 200.0084
MET 210.0071
THR 220.0028
CYS 230.0043
ARG 240.0111
ALA 250.0150
ARG 260.0225
SER 270.0250
SER 290.0225
VAL 300.0178
SER 310.0199
TYR 320.0146
MET 330.0091
HIS 340.0079
TRP 350.0082
TYR 360.0117
GLN 370.0161
GLN 380.0192
LYS 390.0226
SER 400.0245
GLY 410.0319
SER 420.0267
SER 430.0197
PRO 440.0164
LYS 450.0179
PRO 460.0149
TRP 470.0159
ILE 480.0139
HIS 490.0142
ALA 500.0155
THR 510.0143
SER 520.0182
ASN 530.0207
LEU 540.0216
ALA 550.0224
SER 560.0310
GLY 570.0320
VAL 580.0258
PRO 590.0229
ALA 600.0206
ARG 610.0172
PHE 620.0170
SER 630.0141
GLY 640.0103
SER 650.0143
GLY 660.0143
SER 670.0187
GLY 680.0217
THR 690.0181
SER 700.0129
TYR 710.0075
SER 720.0047
LEU 730.0089
THR 740.0097
ILE 750.0136
SER 760.0144
ARG 770.0171
VAL 780.0172
GLU 790.0203
ALA 800.0177
GLU 810.0181
ASP 820.0173
ALA 830.0176
ALA 840.0178
THR 850.0169
TYR 860.0129
TYR 870.0094
CYS 880.0046
GLN 890.0036
GLN 900.0067
TRP 910.0087
SER 920.0131
SER 930.0128
HIS 940.0109
PRO 950.0059
PRO 960.0045
THR 970.0052
PHE 980.0056
GLY 990.0078
SER 1000.0132
GLY 1010.0126
THR 1020.0136
LYS 1030.0163
LEU 1040.0164
GLU 1050.0164
ILE 1060.0164
LYS 1070.0136
ARG 1080.0082
ALA 1090.0037
ASP 1100.0040
ALA 1110.0050
ALA 1120.0065
PRO 1130.0071
THR 1140.0074
VAL 1150.0074
SER 1160.0073
ILE 1170.0067
PHE 1180.0052
PRO 1190.0056
PRO 1200.0054
SER 1210.0044
SER 1220.0060
GLU 1230.0045
GLN 1240.0041
LEU 1250.0069
THR 1260.0075
SER 1270.0062
GLY 1280.0066
GLY 1290.0055
ALA 1300.0063
SER 1310.0054
VAL 1320.0061
VAL 1330.0063
CYS 1340.0061
PHE 1350.0062
LEU 1360.0065
ASN 1370.0048
ASN 1380.0038
PHE 1390.0029
TYR 1400.0020
PRO 1410.0032
LYS 1420.0036
ASP 1430.0058
ILE 1440.0053
ASN 1450.0053
VAL 1460.0102
LYS 1470.0103
TRP 1480.0092
LYS 1490.0133
ILE 1500.0129
ASP 1510.0145
GLY 1520.0172
SER 1530.0164
GLU 1540.0169
ARG 1550.0149
GLN 1560.0134
ASN 1570.0129
GLY 1580.0078
VAL 1590.0081
LEU 1600.0086
ASN 1610.0048
SER 1620.0046
TRP 1630.0043
THR 1640.0020
ASP 1650.0077
GLN 1660.0075
ASP 1670.0077
SER 1680.0085
LYS 1690.0069
ASP 1700.0055
SER 1710.0058
THR 1720.0033
TYR 1730.0018
SER 1740.0021
MET 1750.0036
SER 1760.0067
SER 1770.0065
THR 1780.0061
LEU 1790.0080
THR 1800.0067
LEU 1810.0073
THR 1820.0084
LYS 1830.0092
ASP 1840.0116
GLU 1850.0122
TYR 1860.0110
GLU 1870.0127
ARG 1880.0150
HIS 1890.0146
ASN 1900.0140
SER 1910.0120
TYR 1920.0106
THR 1930.0111
CYS 1940.0088
GLU 1950.0096
ALA 1960.0102
THR 1970.0065
HIS 1980.0068
LYS 1990.0076
THR 2000.0089
SER 2010.0104
THR 2020.0127
SER 2030.0108
PRO 2040.0098
ILE 2050.0089
VAL 2060.0107
LYS 2070.0089
SER 2080.0083
PHE 2090.0100
ASN 2100.0120
ARG 2110.0114
ASN 2120.0154
GLU 2130.0143
CYS 2140.0130

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.