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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 17  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0771
ILE 4210.0089
PHE 4220.0087
ILE 4230.0077
SER 4240.0085
ASN 4250.0096
ASP 4260.0079
LYS 4270.0020
GLU 4280.0054
SER 4290.0068
ILE 4300.0044
LYS 4310.0045
CYS 4320.0024
PRO 4330.0020
CYS 4340.0015
GLU 4350.0021
PRO 4360.0023
GLU 4370.0032
ARG 4380.0031
ILE 4390.0128
SER 4400.0201
GLU 4410.0308
SER 4420.0404
THR 4430.0363
CYS 4440.0287
ASN 4450.0135
PHE 4460.0099
TYR 4470.0036
VAL 4480.0023
CYS 4490.0026
ASN 4500.0043
CYS 4510.0027
VAL 4520.0029
GLU 4530.0030
LYS 4540.0063
GLU 10.0204
VAL 20.0133
GLN 30.0120
LEU 40.0058
VAL 50.0055
GLU 60.0032
SER 70.0068
GLY 80.0073
GLY 90.0103
GLY 100.0168
LEU 110.0218
VAL 120.0196
LYS 130.0243
PRO 140.0232
GLY 150.0156
GLY 160.0122
SER 170.0082
LEU 180.0067
LYS 190.0029
LEU 200.0029
SER 210.0025
CYS 220.0037
ALA 230.0079
ALA 240.0095
SER 250.0142
GLY 260.0165
PHE 270.0141
ILE 280.0138
PHE 290.0113
SER 300.0117
ASP 310.0085
TYR 320.0060
TYR 330.0042
MET 340.0035
TYR 350.0027
TRP 360.0036
VAL 370.0052
ARG 380.0073
GLN 390.0077
THR 400.0097
PRO 410.0113
GLU 420.0061
LYS 430.0060
ARG 440.0039
LEU 450.0034
GLU 460.0071
TRP 470.0059
VAL 480.0062
ALA 490.0056
THR 500.0050
ILE 510.0063
SER 520.0064
ASP 520.0080
GLY 530.0111
ASN 540.0129
SER 550.0103
TYR 560.0094
THR 570.0085
TYR 580.0094
TYR 590.0099
VAL 600.0112
ASP 610.0217
SER 620.0209
VAL 630.0157
LYS 640.0189
GLY 650.0184
ARG 660.0147
PHE 670.0104
THR 680.0093
ILE 690.0070
SER 700.0090
ARG 710.0094
ASP 720.0130
ASN 730.0152
ALA 740.0191
LYS 750.0166
ASN 760.0129
ASN 770.0090
LEU 780.0054
TYR 790.0033
LEU 800.0039
GLN 810.0052
MET 820.0072
SER 820.0088
SER 820.0138
LEU 820.0160
LYS 830.0224
SER 840.0265
GLU 850.0240
ASP 860.0184
THR 870.0193
ALA 880.0127
ILE 890.0099
TYR 900.0071
TYR 910.0037
CYS 920.0027
ALA 930.0021
ARG 940.0036
ASP 950.0042
GLY 960.0069
PRO 970.0085
THR 980.0098
ASP 990.0110
SER 1000.0087
SER 1000.0070
GLY 1000.0061
TYR 1000.0064
GLY 1000.0048
GLY 1000.0050
PHE 1000.0038
GLY 1010.0053
TYR 1020.0048
TRP 1030.0024
GLY 1040.0030
GLN 1050.0047
GLY 1060.0056
THR 1070.0078
LEU 1080.0117
VAL 1090.0141
THR 1100.0201
VAL 1110.0214
SER 1120.0303
GLU 1130.0352
ALA 1140.0377
LYS 1150.0366
THR 1160.0310
THR 1170.0283
PRO 1180.0235
PRO 1190.0165
SER 1200.0120
VAL 1210.0066
TYR 1220.0047
PRO 1230.0056
LEU 1240.0062
ALA 1250.0060
PRO 1260.0075
GLY 1270.0122
SER 1280.0206
ALA 1290.0205
ALA 1300.0142
GLN 1330.0133
THR 1340.0203
ASN 1350.0269
SER 1360.0315
MET 1370.0257
VAL 1380.0183
THR 1390.0120
LEU 1400.0083
GLY 1410.0073
CYS 1420.0039
LEU 1430.0051
VAL 1440.0081
LYS 1450.0098
GLY 1460.0170
TYR 1470.0211
PHE 1480.0264
PRO 1490.0251
GLU 1500.0207
PRO 1510.0198
VAL 1520.0160
THR 1530.0126
VAL 1540.0077
THR 1560.0053
TRP 1570.0050
ASN 1620.0074
SER 1630.0024
GLY 1640.0073
SER 1650.0119
LEU 1660.0136
SER 1670.0164
SER 1680.0204
GLY 1690.0188
VAL 1710.0159
HIS 1720.0161
THR 1730.0149
PHE 1740.0140
PRO 1750.0170
ALA 1760.0147
VAL 1770.0205
LEU 1780.0274
GLN 1790.0306
SER 1800.0384
ASP 1830.0349
LEU 1840.0277
TYR 1850.0213
THR 1860.0131
LEU 1870.0107
SER 1880.0076
SER 1890.0105
SER 1900.0114
VAL 1910.0123
THR 1920.0177
VAL 1930.0203
PRO 1940.0277
SER 1950.0266
SER 1960.0311
PRO 1980.0262
ARG 1990.0207
PRO 2000.0194
SER 2020.0284
GLU 2030.0271
THR 2040.0197
VAL 2050.0116
THR 2060.0066
CYS 2080.0027
ASN 2090.0054
VAL 2100.0099
ALA 2110.0161
HIS 2120.0198
PRO 2130.0231
ALA 2140.0273
SER 2150.0270
SER 2160.0260
THR 2170.0220
LYS 2180.0186
VAL 2190.0147
ASP 2200.0084
LYS 2210.0076
LYS 2220.0094
ILE 2230.0069
VAL 2260.0099
PRO 2270.0039
ARG 2280.0069
ASP 2320.0228
CYS 2330.0340
SER 20.0170
VAL 30.0174
LEU 40.0161
SER 50.0207
GLN 60.0180
SER 70.0203
PRO 80.0197
ALA 90.0201
ILE 100.0195
LEU 110.0158
SER 120.0155
ALA 130.0135
SER 140.0157
PRO 150.0158
GLY 160.0164
GLU 170.0148
LYS 180.0124
VAL 190.0128
THR 200.0138
MET 210.0153
THR 220.0174
CYS 230.0178
ARG 240.0223
ALA 250.0220
ARG 260.0259
SER 270.0263
SER 290.0241
VAL 300.0190
SER 310.0187
TYR 320.0122
MET 330.0100
HIS 340.0067
TRP 350.0063
TYR 360.0047
GLN 370.0061
GLN 380.0074
LYS 390.0090
SER 400.0082
GLY 410.0078
SER 420.0063
SER 430.0036
PRO 440.0032
LYS 450.0035
PRO 460.0027
TRP 470.0034
ILE 480.0056
HIS 490.0071
ALA 500.0105
THR 510.0119
SER 520.0117
ASN 530.0095
LEU 540.0059
ALA 550.0061
SER 560.0084
GLY 570.0084
VAL 580.0059
PRO 590.0075
ALA 600.0061
ARG 610.0075
PHE 620.0060
SER 630.0082
GLY 640.0115
SER 650.0161
GLY 660.0206
SER 670.0240
GLY 680.0262
THR 690.0256
SER 700.0239
TYR 710.0179
SER 720.0151
LEU 730.0110
THR 740.0110
ILE 750.0096
SER 760.0095
ARG 770.0128
VAL 780.0132
GLU 790.0142
ALA 800.0142
GLU 810.0133
ASP 820.0130
ALA 830.0138
ALA 840.0122
THR 850.0117
TYR 860.0089
TYR 870.0084
CYS 880.0085
GLN 890.0072
GLN 900.0075
TRP 910.0057
SER 920.0081
SER 930.0066
HIS 940.0039
PRO 950.0026
PRO 960.0034
THR 970.0068
PHE 980.0062
GLY 990.0093
SER 1000.0110
GLY 1010.0140
THR 1020.0146
LYS 1030.0154
LEU 1040.0144
GLU 1050.0144
ILE 1060.0135
LYS 1070.0103
ARG 1080.0094
ALA 1090.0087
ASP 1100.0127
ALA 1110.0168
ALA 1120.0204
PRO 1130.0102
THR 1140.0146
VAL 1150.0098
SER 1160.0088
ILE 1170.0072
PHE 1180.0081
PRO 1190.0087
PRO 1200.0099
SER 1210.0126
SER 1220.0191
GLU 1230.0153
GLN 1240.0130
LEU 1250.0202
THR 1260.0254
SER 1270.0234
GLY 1280.0247
GLY 1290.0185
ALA 1300.0138
SER 1310.0089
VAL 1320.0062
VAL 1330.0058
CYS 1340.0038
PHE 1350.0069
LEU 1360.0057
ASN 1370.0110
ASN 1380.0127
PHE 1390.0064
TYR 1400.0030
PRO 1410.0061
LYS 1420.0113
ASP 1430.0201
ILE 1440.0181
ASN 1450.0231
VAL 1460.0164
LYS 1470.0208
TRP 1480.0152
LYS 1490.0179
ILE 1500.0100
ASP 1510.0105
GLY 1520.0231
SER 1530.0288
GLU 1540.0284
ARG 1550.0266
GLN 1560.0248
ASN 1570.0306
GLY 1580.0178
VAL 1590.0109
LEU 1600.0083
ASN 1610.0101
SER 1620.0129
TRP 1630.0119
THR 1640.0159
ASP 1650.0170
GLN 1660.0163
ASP 1670.0172
SER 1680.0175
LYS 1690.0154
ASP 1700.0160
SER 1710.0140
THR 1720.0124
TYR 1730.0122
SER 1740.0117
MET 1750.0103
SER 1760.0078
SER 1770.0057
THR 1780.0069
LEU 1790.0080
THR 1800.0122
LEU 1810.0153
THR 1820.0245
LYS 1830.0251
ASP 1840.0286
GLU 1850.0219
TYR 1860.0166
GLU 1870.0208
ARG 1880.0172
HIS 1890.0074
ASN 1900.0100
SER 1910.0109
TYR 1920.0066
THR 1930.0126
CYS 1940.0107
GLU 1950.0206
ALA 1960.0205
THR 1970.0320
HIS 1980.0266
LYS 1990.0339
THR 2000.0378
SER 2010.0556
THR 2020.0771
SER 2030.0587
PRO 2040.0418
ILE 2050.0319
VAL 2060.0226
LYS 2070.0174
SER 2080.0158
PHE 2090.0172
ASN 2100.0178
ARG 2110.0178
ASN 2120.0282
GLU 2130.0283
CYS 2140.0287

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.