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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 18  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0715
ILE 4210.0222
PHE 4220.0204
ILE 4230.0163
SER 4240.0160
ASN 4250.0158
ASP 4260.0150
LYS 4270.0123
GLU 4280.0140
SER 4290.0158
ILE 4300.0144
LYS 4310.0125
CYS 4320.0108
PRO 4330.0099
CYS 4340.0089
GLU 4350.0083
PRO 4360.0107
GLU 4370.0110
ARG 4380.0113
ILE 4390.0205
SER 4400.0259
GLU 4410.0358
SER 4420.0499
THR 4430.0397
CYS 4440.0258
ASN 4450.0152
PHE 4460.0142
TYR 4470.0115
VAL 4480.0095
CYS 4490.0094
ASN 4500.0100
CYS 4510.0074
VAL 4520.0078
GLU 4530.0104
LYS 4540.0098
GLU 10.0098
VAL 20.0053
GLN 30.0054
LEU 40.0028
VAL 50.0047
GLU 60.0056
SER 70.0091
GLY 80.0111
GLY 90.0098
GLY 100.0124
LEU 110.0149
VAL 120.0202
LYS 130.0268
PRO 140.0283
GLY 150.0299
GLY 160.0255
SER 170.0216
LEU 180.0176
LYS 190.0125
LEU 200.0096
SER 210.0083
CYS 220.0044
ALA 230.0046
ALA 240.0039
SER 250.0063
GLY 260.0079
PHE 270.0070
ILE 280.0086
PHE 290.0057
SER 300.0070
ASP 310.0082
TYR 320.0065
TYR 330.0064
MET 340.0039
TYR 350.0050
TRP 360.0057
VAL 370.0050
ARG 380.0055
GLN 390.0045
THR 400.0032
PRO 410.0025
GLU 420.0035
LYS 430.0050
ARG 440.0035
LEU 450.0027
GLU 460.0071
TRP 470.0067
VAL 480.0071
ALA 490.0079
THR 500.0069
ILE 510.0060
SER 520.0079
ASP 520.0085
GLY 530.0119
ASN 540.0127
SER 550.0084
TYR 560.0098
THR 570.0085
TYR 580.0097
TYR 590.0109
VAL 600.0132
ASP 610.0182
SER 620.0196
VAL 630.0156
LYS 640.0155
GLY 650.0149
ARG 660.0159
PHE 670.0118
THR 680.0085
ILE 690.0054
SER 700.0041
ARG 710.0011
ASP 720.0028
ASN 730.0055
ALA 740.0077
LYS 750.0081
ASN 760.0057
ASN 770.0040
LEU 780.0027
TYR 790.0063
LEU 800.0081
GLN 810.0107
MET 820.0146
SER 820.0195
SER 820.0234
LEU 820.0211
LYS 830.0229
SER 840.0224
GLU 850.0190
ASP 860.0142
THR 870.0115
ALA 880.0064
ILE 890.0047
TYR 900.0050
TYR 910.0041
CYS 920.0040
ALA 930.0033
ARG 940.0050
ASP 950.0050
GLY 960.0049
PRO 970.0075
THR 980.0079
ASP 990.0080
SER 1000.0060
SER 1000.0057
GLY 1000.0055
TYR 1000.0046
GLY 1000.0047
GLY 1000.0045
PHE 1000.0048
GLY 1010.0051
TYR 1020.0055
TRP 1030.0028
GLY 1040.0029
GLN 1050.0037
GLY 1060.0038
THR 1070.0053
LEU 1080.0049
VAL 1090.0089
THR 1100.0123
VAL 1110.0181
SER 1120.0213
GLU 1130.0260
ALA 1140.0185
LYS 1150.0159
THR 1160.0118
THR 1170.0128
PRO 1180.0126
PRO 1190.0084
SER 1200.0074
VAL 1210.0087
TYR 1220.0074
PRO 1230.0061
LEU 1240.0060
ALA 1250.0110
PRO 1260.0134
GLY 1270.0139
SER 1280.0199
ALA 1290.0254
ALA 1300.0180
GLN 1330.0413
THR 1340.0449
ASN 1350.0468
SER 1360.0533
MET 1370.0399
VAL 1380.0288
THR 1390.0114
LEU 1400.0065
GLY 1410.0013
CYS 1420.0038
LEU 1430.0051
VAL 1440.0064
LYS 1450.0055
GLY 1460.0048
TYR 1470.0059
PHE 1480.0059
PRO 1490.0045
GLU 1500.0031
PRO 1510.0083
VAL 1520.0095
THR 1530.0124
VAL 1540.0092
THR 1560.0077
TRP 1570.0019
ASN 1620.0034
SER 1630.0069
GLY 1640.0077
SER 1650.0047
LEU 1660.0073
SER 1670.0129
SER 1680.0146
GLY 1690.0135
VAL 1710.0099
HIS 1720.0090
THR 1730.0092
PHE 1740.0050
PRO 1750.0042
ALA 1760.0041
VAL 1770.0022
LEU 1780.0023
GLN 1790.0040
SER 1800.0069
ASP 1830.0076
LEU 1840.0050
TYR 1850.0025
THR 1860.0049
LEU 1870.0052
SER 1880.0052
SER 1890.0070
SER 1900.0046
VAL 1910.0050
THR 1920.0187
VAL 1930.0281
PRO 1940.0430
SER 1950.0472
SER 1960.0535
PRO 1980.0438
ARG 1990.0385
PRO 2000.0401
SER 2020.0536
GLU 2030.0463
THR 2040.0342
VAL 2050.0156
THR 2060.0114
CYS 2080.0047
ASN 2090.0080
VAL 2100.0106
ALA 2110.0149
HIS 2120.0130
PRO 2130.0171
ALA 2140.0139
SER 2150.0160
SER 2160.0201
THR 2170.0173
LYS 2180.0160
VAL 2190.0134
ASP 2200.0134
LYS 2210.0136
LYS 2220.0159
ILE 2230.0175
VAL 2260.0292
PRO 2270.0287
ARG 2280.0248
ASP 2320.0323
CYS 2330.0323
SER 20.0109
VAL 30.0143
LEU 40.0138
SER 50.0194
GLN 60.0179
SER 70.0227
PRO 80.0237
ALA 90.0234
ILE 100.0212
LEU 110.0200
SER 120.0198
ALA 130.0164
SER 140.0165
PRO 150.0107
GLY 160.0072
GLU 170.0128
LYS 180.0151
VAL 190.0171
THR 200.0185
MET 210.0176
THR 220.0193
CYS 230.0170
ARG 240.0208
ALA 250.0179
ARG 260.0214
SER 270.0194
SER 290.0167
VAL 300.0119
SER 310.0127
TYR 320.0070
MET 330.0058
HIS 340.0034
TRP 350.0035
TYR 360.0023
GLN 370.0040
GLN 380.0066
LYS 390.0080
SER 400.0079
GLY 410.0089
SER 420.0072
SER 430.0046
PRO 440.0046
LYS 450.0044
PRO 460.0033
TRP 470.0033
ILE 480.0052
HIS 490.0058
ALA 500.0087
THR 510.0107
SER 520.0133
ASN 530.0119
LEU 540.0105
ALA 550.0096
SER 560.0142
GLY 570.0136
VAL 580.0089
PRO 590.0101
ALA 600.0137
ARG 610.0107
PHE 620.0098
SER 630.0137
GLY 640.0144
SER 650.0188
GLY 660.0215
SER 670.0231
GLY 680.0231
THR 690.0226
SER 700.0234
TYR 710.0179
SER 720.0167
LEU 730.0131
THR 740.0153
ILE 750.0111
SER 760.0136
ARG 770.0082
VAL 780.0075
GLU 790.0068
ALA 800.0128
GLU 810.0108
ASP 820.0075
ALA 830.0106
ALA 840.0095
THR 850.0088
TYR 860.0060
TYR 870.0057
CYS 880.0052
GLN 890.0040
GLN 900.0024
TRP 910.0031
SER 920.0039
SER 930.0051
HIS 940.0080
PRO 950.0091
PRO 960.0058
THR 970.0060
PHE 980.0036
GLY 990.0066
SER 1000.0096
GLY 1010.0131
THR 1020.0138
LYS 1030.0140
LEU 1040.0135
GLU 1050.0158
ILE 1060.0153
LYS 1070.0226
ARG 1080.0266
ALA 1090.0341
ASP 1100.0386
ALA 1110.0344
ALA 1120.0328
PRO 1130.0134
THR 1140.0149
VAL 1150.0098
SER 1160.0074
ILE 1170.0070
PHE 1180.0055
PRO 1190.0043
PRO 1200.0050
SER 1210.0079
SER 1220.0121
GLU 1230.0147
GLN 1240.0125
LEU 1250.0099
THR 1260.0161
SER 1270.0200
GLY 1280.0147
GLY 1290.0126
ALA 1300.0072
SER 1310.0058
VAL 1320.0054
VAL 1330.0048
CYS 1340.0051
PHE 1350.0057
LEU 1360.0060
ASN 1370.0117
ASN 1380.0158
PHE 1390.0171
TYR 1400.0252
PRO 1410.0266
LYS 1420.0212
ASP 1430.0278
ILE 1440.0212
ASN 1450.0173
VAL 1460.0076
LYS 1470.0023
TRP 1480.0042
LYS 1490.0107
ILE 1500.0149
ASP 1510.0199
GLY 1520.0226
SER 1530.0178
GLU 1540.0172
ARG 1550.0110
GLN 1560.0109
ASN 1570.0105
GLY 1580.0048
VAL 1590.0028
LEU 1600.0020
ASN 1610.0028
SER 1620.0023
TRP 1630.0046
THR 1640.0067
ASP 1650.0086
GLN 1660.0118
ASP 1670.0137
SER 1680.0136
LYS 1690.0206
ASP 1700.0232
SER 1710.0187
THR 1720.0181
TYR 1730.0113
SER 1740.0088
MET 1750.0052
SER 1760.0032
SER 1770.0031
THR 1780.0033
LEU 1790.0059
THR 1800.0075
LEU 1810.0107
THR 1820.0166
LYS 1830.0116
ASP 1840.0168
GLU 1850.0180
TYR 1860.0138
GLU 1870.0152
ARG 1880.0212
HIS 1890.0199
ASN 1900.0194
SER 1910.0178
TYR 1920.0128
THR 1930.0109
CYS 1940.0057
GLU 1950.0067
ALA 1960.0124
THR 1970.0250
HIS 1980.0308
LYS 1990.0448
THR 2000.0493
SER 2010.0562
THR 2020.0715
SER 2030.0384
PRO 2040.0233
ILE 2050.0209
VAL 2060.0112
LYS 2070.0123
SER 2080.0137
PHE 2090.0149
ASN 2100.0167
ARG 2110.0139
ASN 2120.0092
GLU 2130.0093
CYS 2140.0170

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.