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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 20  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0718
ILE 4210.0718
PHE 4220.0650
ILE 4230.0452
SER 4240.0420
ASN 4250.0368
ASP 4260.0374
LYS 4270.0197
GLU 4280.0224
SER 4290.0318
ILE 4300.0249
LYS 4310.0150
CYS 4320.0106
PRO 4330.0047
CYS 4340.0052
GLU 4350.0046
PRO 4360.0079
GLU 4370.0102
ARG 4380.0065
ILE 4390.0194
SER 4400.0182
GLU 4410.0290
SER 4420.0322
THR 4430.0415
CYS 4440.0230
ASN 4450.0092
PHE 4460.0182
TYR 4470.0187
VAL 4480.0214
CYS 4490.0148
ASN 4500.0155
CYS 4510.0060
VAL 4520.0052
GLU 4530.0048
LYS 4540.0049
GLU 10.0140
VAL 20.0107
GLN 30.0093
LEU 40.0076
VAL 50.0077
GLU 60.0065
SER 70.0076
GLY 80.0068
GLY 90.0067
GLY 100.0115
LEU 110.0114
VAL 120.0096
LYS 130.0130
PRO 140.0084
GLY 150.0051
GLY 160.0043
SER 170.0062
LEU 180.0068
LYS 190.0062
LEU 200.0052
SER 210.0058
CYS 220.0057
ALA 230.0066
ALA 240.0073
SER 250.0084
GLY 260.0101
PHE 270.0095
ILE 280.0080
PHE 290.0065
SER 300.0069
ASP 310.0051
TYR 320.0040
TYR 330.0027
MET 340.0042
TYR 350.0039
TRP 360.0040
VAL 370.0031
ARG 380.0033
GLN 390.0046
THR 400.0059
PRO 410.0084
GLU 420.0080
LYS 430.0049
ARG 440.0038
LEU 450.0027
GLU 460.0046
TRP 470.0042
VAL 480.0045
ALA 490.0059
THR 500.0044
ILE 510.0043
SER 520.0045
ASP 520.0068
GLY 530.0147
ASN 540.0175
SER 550.0119
TYR 560.0057
THR 570.0064
TYR 580.0057
TYR 590.0075
VAL 600.0092
ASP 610.0150
SER 620.0140
VAL 630.0116
LYS 640.0145
GLY 650.0158
ARG 660.0127
PHE 670.0094
THR 680.0093
ILE 690.0071
SER 700.0065
ARG 710.0061
ASP 720.0080
ASN 730.0081
ALA 740.0109
LYS 750.0093
ASN 760.0076
ASN 770.0061
LEU 780.0049
TYR 790.0057
LEU 800.0060
GLN 810.0078
MET 820.0082
SER 820.0088
SER 820.0086
LEU 820.0059
LYS 830.0090
SER 840.0107
GLU 850.0104
ASP 860.0066
THR 870.0069
ALA 880.0054
ILE 890.0052
TYR 900.0041
TYR 910.0046
CYS 920.0049
ALA 930.0049
ARG 940.0053
ASP 950.0057
GLY 960.0068
PRO 970.0067
THR 980.0071
ASP 990.0066
SER 1000.0070
SER 1000.0063
GLY 1000.0057
TYR 1000.0052
GLY 1000.0045
GLY 1000.0050
PHE 1000.0052
GLY 1010.0061
TYR 1020.0063
TRP 1030.0058
GLY 1040.0068
GLN 1050.0073
GLY 1060.0063
THR 1070.0060
LEU 1080.0060
VAL 1090.0047
THR 1100.0066
VAL 1110.0068
SER 1120.0154
GLU 1130.0255
ALA 1140.0303
LYS 1150.0373
THR 1160.0304
THR 1170.0320
PRO 1180.0274
PRO 1190.0157
SER 1200.0147
VAL 1210.0022
TYR 1220.0017
PRO 1230.0028
LEU 1240.0039
ALA 1250.0023
PRO 1260.0054
GLY 1270.0149
SER 1280.0233
ALA 1290.0154
ALA 1300.0271
GLN 1330.0545
THR 1340.0534
ASN 1350.0510
SER 1360.0507
MET 1370.0340
VAL 1380.0258
THR 1390.0059
LEU 1400.0019
GLY 1410.0045
CYS 1420.0041
LEU 1430.0028
VAL 1440.0019
LYS 1450.0080
GLY 1460.0167
TYR 1470.0152
PHE 1480.0154
PRO 1490.0086
GLU 1500.0053
PRO 1510.0148
VAL 1520.0140
THR 1530.0201
VAL 1540.0131
THR 1560.0139
TRP 1570.0110
ASN 1620.0183
SER 1630.0221
GLY 1640.0214
SER 1650.0256
LEU 1660.0178
SER 1670.0182
SER 1680.0147
GLY 1690.0074
VAL 1710.0082
HIS 1720.0103
THR 1730.0113
PHE 1740.0118
PRO 1750.0143
ALA 1760.0131
VAL 1770.0177
LEU 1780.0230
GLN 1790.0321
SER 1800.0424
ASP 1830.0314
LEU 1840.0240
TYR 1850.0136
THR 1860.0089
LEU 1870.0069
SER 1880.0074
SER 1890.0089
SER 1900.0054
VAL 1910.0036
THR 1920.0069
VAL 1930.0227
PRO 1940.0380
SER 1950.0489
SER 1960.0573
PRO 1980.0445
ARG 1990.0336
PRO 2000.0311
SER 2020.0438
GLU 2030.0432
THR 2040.0334
VAL 2050.0120
THR 2060.0123
CYS 2080.0068
ASN 2090.0118
VAL 2100.0118
ALA 2110.0248
HIS 2120.0232
PRO 2130.0353
ALA 2140.0317
SER 2150.0373
SER 2160.0457
THR 2170.0323
LYS 2180.0283
VAL 2190.0193
ASP 2200.0093
LYS 2210.0069
LYS 2220.0051
ILE 2230.0052
VAL 2260.0054
PRO 2270.0066
ARG 2280.0116
ASP 2320.0285
CYS 2330.0353
SER 20.0061
VAL 30.0041
LEU 40.0022
SER 50.0025
GLN 60.0043
SER 70.0076
PRO 80.0105
ALA 90.0100
ILE 100.0113
LEU 110.0128
SER 120.0142
ALA 130.0149
SER 140.0159
PRO 150.0150
GLY 160.0161
GLU 170.0173
LYS 180.0160
VAL 190.0139
THR 200.0113
MET 210.0086
THR 220.0070
CYS 230.0040
ARG 240.0037
ALA 250.0039
ARG 260.0048
SER 270.0070
SER 290.0075
VAL 300.0059
SER 310.0059
TYR 320.0024
MET 330.0027
HIS 340.0026
TRP 350.0021
TYR 360.0013
GLN 370.0017
GLN 380.0035
LYS 390.0031
SER 400.0028
GLY 410.0055
SER 420.0048
SER 430.0046
PRO 440.0030
LYS 450.0027
PRO 460.0025
TRP 470.0011
ILE 480.0021
HIS 490.0028
ALA 500.0045
THR 510.0032
SER 520.0049
ASN 530.0051
LEU 540.0045
ALA 550.0041
SER 560.0076
GLY 570.0052
VAL 580.0045
PRO 590.0096
ALA 600.0122
ARG 610.0127
PHE 620.0092
SER 630.0090
GLY 640.0071
SER 650.0086
GLY 660.0078
SER 670.0080
GLY 680.0084
THR 690.0060
SER 700.0062
TYR 710.0055
SER 720.0063
LEU 730.0070
THR 740.0108
ILE 750.0121
SER 760.0152
ARG 770.0158
VAL 780.0137
GLU 790.0131
ALA 800.0111
GLU 810.0096
ASP 820.0093
ALA 830.0091
ALA 840.0061
THR 850.0044
TYR 860.0031
TYR 870.0022
CYS 880.0028
GLN 890.0033
GLN 900.0041
TRP 910.0048
SER 920.0063
SER 930.0064
HIS 940.0059
PRO 950.0065
PRO 960.0051
THR 970.0045
PHE 980.0026
GLY 990.0014
SER 1000.0022
GLY 1010.0049
THR 1020.0064
LYS 1030.0075
LEU 1040.0109
GLU 1050.0113
ILE 1060.0116
LYS 1070.0136
ARG 1080.0095
ALA 1090.0086
ASP 1100.0134
ALA 1110.0117
ALA 1120.0123
PRO 1130.0110
THR 1140.0111
VAL 1150.0097
SER 1160.0068
ILE 1170.0057
PHE 1180.0061
PRO 1190.0098
PRO 1200.0088
SER 1210.0092
SER 1220.0119
GLU 1230.0102
GLN 1240.0079
LEU 1250.0128
THR 1260.0168
SER 1270.0148
GLY 1280.0114
GLY 1290.0075
ALA 1300.0065
SER 1310.0049
VAL 1320.0066
VAL 1330.0059
CYS 1340.0073
PHE 1350.0078
LEU 1360.0087
ASN 1370.0098
ASN 1380.0098
PHE 1390.0107
TYR 1400.0116
PRO 1410.0128
LYS 1420.0139
ASP 1430.0157
ILE 1440.0125
ASN 1450.0114
VAL 1460.0056
LYS 1470.0082
TRP 1480.0108
LYS 1490.0178
ILE 1500.0192
ASP 1510.0245
GLY 1520.0298
SER 1530.0271
GLU 1540.0255
ARG 1550.0198
GLN 1560.0151
ASN 1570.0120
GLY 1580.0056
VAL 1590.0057
LEU 1600.0059
ASN 1610.0099
SER 1620.0101
TRP 1630.0105
THR 1640.0109
ASP 1650.0091
GLN 1660.0101
ASP 1670.0106
SER 1680.0106
LYS 1690.0098
ASP 1700.0096
SER 1710.0099
THR 1720.0102
TYR 1730.0106
SER 1740.0107
MET 1750.0107
SER 1760.0077
SER 1770.0068
THR 1780.0055
LEU 1790.0046
THR 1800.0024
LEU 1810.0045
THR 1820.0040
LYS 1830.0095
ASP 1840.0096
GLU 1850.0113
TYR 1860.0128
GLU 1870.0175
ARG 1880.0198
HIS 1890.0214
ASN 1900.0242
SER 1910.0229
TYR 1920.0172
THR 1930.0149
CYS 1940.0088
GLU 1950.0078
ALA 1960.0077
THR 1970.0121
HIS 1980.0140
LYS 1990.0187
THR 2000.0184
SER 2010.0196
THR 2020.0261
SER 2030.0138
PRO 2040.0097
ILE 2050.0080
VAL 2060.0071
LYS 2070.0087
SER 2080.0123
PHE 2090.0197
ASN 2100.0240
ARG 2110.0227
ASN 2120.0271
GLU 2130.0298
CYS 2140.0308

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.