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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 21  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0821
ILE 4210.0821
PHE 4220.0752
ILE 4230.0525
SER 4240.0468
ASN 4250.0415
ASP 4260.0422
LYS 4270.0205
GLU 4280.0254
SER 4290.0349
ILE 4300.0265
LYS 4310.0167
CYS 4320.0098
PRO 4330.0059
CYS 4340.0060
GLU 4350.0057
PRO 4360.0093
GLU 4370.0131
ARG 4380.0096
ILE 4390.0268
SER 4400.0218
GLU 4410.0333
SER 4420.0280
THR 4430.0431
CYS 4440.0271
ASN 4450.0132
PHE 4460.0227
TYR 4470.0216
VAL 4480.0252
CYS 4490.0157
ASN 4500.0126
CYS 4510.0028
VAL 4520.0061
GLU 4530.0091
LYS 4540.0257
GLU 10.0051
VAL 20.0048
GLN 30.0047
LEU 40.0054
VAL 50.0067
GLU 60.0075
SER 70.0110
GLY 80.0121
GLY 90.0112
GLY 100.0128
LEU 110.0124
VAL 120.0132
LYS 130.0134
PRO 140.0152
GLY 150.0160
GLY 160.0142
SER 170.0132
LEU 180.0130
LYS 190.0109
LEU 200.0094
SER 210.0090
CYS 220.0068
ALA 230.0069
ALA 240.0060
SER 250.0058
GLY 260.0059
PHE 270.0063
ILE 280.0056
PHE 290.0047
SER 300.0046
ASP 310.0045
TYR 320.0043
TYR 330.0038
MET 340.0048
TYR 350.0040
TRP 360.0039
VAL 370.0030
ARG 380.0033
GLN 390.0041
THR 400.0061
PRO 410.0087
GLU 420.0082
LYS 430.0048
ARG 440.0028
LEU 450.0015
GLU 460.0023
TRP 470.0035
VAL 480.0043
ALA 490.0055
THR 500.0052
ILE 510.0049
SER 520.0061
ASP 520.0084
GLY 530.0168
ASN 540.0209
SER 550.0130
TYR 560.0073
THR 570.0073
TYR 580.0057
TYR 590.0055
VAL 600.0052
ASP 610.0044
SER 620.0035
VAL 630.0048
LYS 640.0059
GLY 650.0085
ARG 660.0087
PHE 670.0070
THR 680.0073
ILE 690.0058
SER 700.0055
ARG 710.0048
ASP 720.0063
ASN 730.0058
ALA 740.0069
LYS 750.0065
ASN 760.0064
ASN 770.0063
LEU 780.0055
TYR 790.0070
LEU 800.0075
GLN 810.0098
MET 820.0109
SER 820.0115
SER 820.0114
LEU 820.0113
LYS 830.0110
SER 840.0116
GLU 850.0094
ASP 860.0086
THR 870.0097
ALA 880.0075
ILE 890.0070
TYR 900.0060
TYR 910.0037
CYS 920.0042
ALA 930.0037
ARG 940.0039
ASP 950.0042
GLY 960.0041
PRO 970.0036
THR 980.0049
ASP 990.0053
SER 1000.0031
SER 1000.0034
GLY 1000.0036
TYR 1000.0034
GLY 1000.0035
GLY 1000.0032
PHE 1000.0032
GLY 1010.0031
TYR 1020.0031
TRP 1030.0024
GLY 1040.0039
GLN 1050.0048
GLY 1060.0073
THR 1070.0094
LEU 1080.0103
VAL 1090.0128
THR 1100.0135
VAL 1110.0140
SER 1120.0169
GLU 1130.0116
ALA 1140.0111
LYS 1150.0113
THR 1160.0053
THR 1170.0108
PRO 1180.0101
PRO 1190.0068
SER 1200.0116
VAL 1210.0054
TYR 1220.0068
PRO 1230.0040
LEU 1240.0045
ALA 1250.0047
PRO 1260.0068
GLY 1270.0111
SER 1280.0169
ALA 1290.0159
ALA 1300.0210
GLN 1330.0536
THR 1340.0464
ASN 1350.0481
SER 1360.0332
MET 1370.0228
VAL 1380.0172
THR 1390.0081
LEU 1400.0047
GLY 1410.0055
CYS 1420.0042
LEU 1430.0075
VAL 1440.0074
LYS 1450.0125
GLY 1460.0168
TYR 1470.0115
PHE 1480.0107
PRO 1490.0130
GLU 1500.0185
PRO 1510.0230
VAL 1520.0171
THR 1530.0223
VAL 1540.0157
THR 1560.0205
TRP 1570.0174
ASN 1620.0265
SER 1630.0335
GLY 1640.0338
SER 1650.0328
LEU 1660.0235
SER 1670.0277
SER 1680.0243
GLY 1690.0179
VAL 1710.0098
HIS 1720.0106
THR 1730.0115
PHE 1740.0134
PRO 1750.0183
ALA 1760.0213
VAL 1770.0261
LEU 1780.0320
GLN 1790.0377
SER 1800.0488
ASP 1830.0353
LEU 1840.0263
TYR 1850.0210
THR 1860.0165
LEU 1870.0134
SER 1880.0100
SER 1890.0092
SER 1900.0086
VAL 1910.0078
THR 1920.0091
VAL 1930.0027
PRO 1940.0059
SER 1950.0210
SER 1960.0220
PRO 1980.0189
ARG 1990.0179
PRO 2000.0240
SER 2020.0334
GLU 2030.0299
THR 2040.0262
VAL 2050.0130
THR 2060.0148
CYS 2080.0107
ASN 2090.0171
VAL 2100.0143
ALA 2110.0201
HIS 2120.0153
PRO 2130.0252
ALA 2140.0177
SER 2150.0160
SER 2160.0275
THR 2170.0217
LYS 2180.0252
VAL 2190.0202
ASP 2200.0153
LYS 2210.0104
LYS 2220.0107
ILE 2230.0067
VAL 2260.0020
PRO 2270.0037
ARG 2280.0056
ASP 2320.0164
CYS 2330.0104
SER 20.0137
VAL 30.0119
LEU 40.0093
SER 50.0071
GLN 60.0062
SER 70.0070
PRO 80.0057
ALA 90.0050
ILE 100.0077
LEU 110.0082
SER 120.0115
ALA 130.0139
SER 140.0170
PRO 150.0191
GLY 160.0188
GLU 170.0161
LYS 180.0135
VAL 190.0107
THR 200.0118
MET 210.0096
THR 220.0094
CYS 230.0101
ARG 240.0125
ALA 250.0136
ARG 260.0193
SER 270.0196
SER 290.0177
VAL 300.0132
SER 310.0124
TYR 320.0070
MET 330.0070
HIS 340.0056
TRP 350.0068
TYR 360.0062
GLN 370.0069
GLN 380.0058
LYS 390.0063
SER 400.0055
GLY 410.0070
SER 420.0059
SER 430.0043
PRO 440.0046
LYS 450.0055
PRO 460.0056
TRP 470.0078
ILE 480.0082
HIS 490.0078
ALA 500.0080
THR 510.0095
SER 520.0118
ASN 530.0122
LEU 540.0120
ALA 550.0109
SER 560.0126
GLY 570.0140
VAL 580.0136
PRO 590.0181
ALA 600.0179
ARG 610.0165
PHE 620.0150
SER 630.0146
GLY 640.0131
SER 650.0165
GLY 660.0165
SER 670.0176
GLY 680.0195
THR 690.0175
SER 700.0164
TYR 710.0125
SER 720.0119
LEU 730.0121
THR 740.0128
ILE 750.0145
SER 760.0161
ARG 770.0176
VAL 780.0155
GLU 790.0176
ALA 800.0143
GLU 810.0148
ASP 820.0121
ALA 830.0090
ALA 840.0082
THR 850.0073
TYR 860.0068
TYR 870.0054
CYS 880.0062
GLN 890.0039
GLN 900.0054
TRP 910.0057
SER 920.0066
SER 930.0088
HIS 940.0086
PRO 950.0080
PRO 960.0061
THR 970.0064
PHE 980.0041
GLY 990.0047
SER 1000.0034
GLY 1010.0054
THR 1020.0064
LYS 1030.0074
LEU 1040.0088
GLU 1050.0104
ILE 1060.0130
LYS 1070.0171
ARG 1080.0203
ALA 1090.0228
ASP 1100.0197
ALA 1110.0168
ALA 1120.0135
PRO 1130.0072
THR 1140.0066
VAL 1150.0043
SER 1160.0072
ILE 1170.0068
PHE 1180.0075
PRO 1190.0084
PRO 1200.0084
SER 1210.0091
SER 1220.0157
GLU 1230.0154
GLN 1240.0153
LEU 1250.0191
THR 1260.0269
SER 1270.0287
GLY 1280.0239
GLY 1290.0188
ALA 1300.0116
SER 1310.0088
VAL 1320.0069
VAL 1330.0068
CYS 1340.0060
PHE 1350.0054
LEU 1360.0037
ASN 1370.0037
ASN 1380.0071
PHE 1390.0072
TYR 1400.0125
PRO 1410.0120
LYS 1420.0072
ASP 1430.0086
ILE 1440.0063
ASN 1450.0063
VAL 1460.0022
LYS 1470.0073
TRP 1480.0093
LYS 1490.0150
ILE 1500.0154
ASP 1510.0210
GLY 1520.0276
SER 1530.0256
GLU 1540.0244
ARG 1550.0185
GLN 1560.0143
ASN 1570.0164
GLY 1580.0116
VAL 1590.0087
LEU 1600.0095
ASN 1610.0085
SER 1620.0088
TRP 1630.0082
THR 1640.0076
ASP 1650.0074
GLN 1660.0084
ASP 1670.0134
SER 1680.0150
LYS 1690.0195
ASP 1700.0194
SER 1710.0147
THR 1720.0117
TYR 1730.0052
SER 1740.0036
MET 1750.0035
SER 1760.0064
SER 1770.0066
THR 1780.0064
LEU 1790.0076
THR 1800.0094
LEU 1810.0092
THR 1820.0144
LYS 1830.0115
ASP 1840.0095
GLU 1850.0076
TYR 1860.0061
GLU 1870.0089
ARG 1880.0119
HIS 1890.0152
ASN 1900.0190
SER 1910.0190
TYR 1920.0133
THR 1930.0123
CYS 1940.0073
GLU 1950.0063
ALA 1960.0020
THR 1970.0091
HIS 1980.0109
LYS 1990.0161
THR 2000.0183
SER 2010.0183
THR 2020.0226
SER 2030.0101
PRO 2040.0067
ILE 2050.0031
VAL 2060.0065
LYS 2070.0089
SER 2080.0133
PHE 2090.0156
ASN 2100.0188
ARG 2110.0177
ASN 2120.0210
GLU 2130.0194
CYS 2140.0201

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.