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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 23  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0687
ILE 4210.0295
PHE 4220.0267
ILE 4230.0192
SER 4240.0205
ASN 4250.0203
ASP 4260.0199
LYS 4270.0100
GLU 4280.0096
SER 4290.0123
ILE 4300.0092
LYS 4310.0027
CYS 4320.0041
PRO 4330.0039
CYS 4340.0023
GLU 4350.0014
PRO 4360.0063
GLU 4370.0050
ARG 4380.0054
ILE 4390.0077
SER 4400.0133
GLU 4410.0224
SER 4420.0414
THR 4430.0302
CYS 4440.0089
ASN 4450.0092
PHE 4460.0111
TYR 4470.0106
VAL 4480.0072
CYS 4490.0057
ASN 4500.0069
CYS 4510.0065
VAL 4520.0133
GLU 4530.0175
LYS 4540.0687
GLU 10.0157
VAL 20.0109
GLN 30.0113
LEU 40.0080
VAL 50.0099
GLU 60.0104
SER 70.0128
GLY 80.0146
GLY 90.0157
GLY 100.0171
LEU 110.0203
VAL 120.0225
LYS 130.0268
PRO 140.0296
GLY 150.0300
GLY 160.0255
SER 170.0206
LEU 180.0173
LYS 190.0145
LEU 200.0122
SER 210.0101
CYS 220.0087
ALA 230.0084
ALA 240.0060
SER 250.0075
GLY 260.0093
PHE 270.0073
ILE 280.0051
PHE 290.0027
SER 300.0023
ASP 310.0039
TYR 320.0032
TYR 330.0021
MET 340.0027
TYR 350.0034
TRP 360.0052
VAL 370.0048
ARG 380.0055
GLN 390.0066
THR 400.0094
PRO 410.0116
GLU 420.0103
LYS 430.0058
ARG 440.0049
LEU 450.0034
GLU 460.0044
TRP 470.0034
VAL 480.0036
ALA 490.0043
THR 500.0037
ILE 510.0043
SER 520.0034
ASP 520.0031
GLY 530.0041
ASN 540.0033
SER 550.0044
TYR 560.0048
THR 570.0071
TYR 580.0056
TYR 590.0041
VAL 600.0032
ASP 610.0047
SER 620.0074
VAL 630.0065
LYS 640.0053
GLY 650.0095
ARG 660.0120
PHE 670.0096
THR 680.0096
ILE 690.0077
SER 700.0082
ARG 710.0069
ASP 720.0084
ASN 730.0057
ALA 740.0076
LYS 750.0083
ASN 760.0050
ASN 770.0070
LEU 780.0065
TYR 790.0090
LEU 800.0100
GLN 810.0131
MET 820.0145
SER 820.0178
SER 820.0203
LEU 820.0206
LYS 830.0227
SER 840.0255
GLU 850.0210
ASP 860.0159
THR 870.0165
ALA 880.0132
ILE 890.0116
TYR 900.0092
TYR 910.0054
CYS 920.0052
ALA 930.0044
ARG 940.0037
ASP 950.0032
GLY 960.0045
PRO 970.0048
THR 980.0052
ASP 990.0036
SER 1000.0031
SER 1000.0030
GLY 1000.0028
TYR 1000.0017
GLY 1000.0010
GLY 1000.0014
PHE 1000.0026
GLY 1010.0032
TYR 1020.0044
TRP 1030.0050
GLY 1040.0073
GLN 1050.0091
GLY 1060.0114
THR 1070.0126
LEU 1080.0160
VAL 1090.0167
THR 1100.0213
VAL 1110.0242
SER 1120.0280
GLU 1130.0282
ALA 1140.0218
LYS 1150.0186
THR 1160.0207
THR 1170.0209
PRO 1180.0214
PRO 1190.0145
SER 1200.0108
VAL 1210.0042
TYR 1220.0012
PRO 1230.0051
LEU 1240.0009
ALA 1250.0036
PRO 1260.0089
GLY 1270.0133
SER 1280.0237
ALA 1290.0287
ALA 1300.0303
GLN 1330.0528
THR 1340.0515
ASN 1350.0611
SER 1360.0525
MET 1370.0405
VAL 1380.0262
THR 1390.0098
LEU 1400.0051
GLY 1410.0039
CYS 1420.0055
LEU 1430.0042
VAL 1440.0054
LYS 1450.0068
GLY 1460.0100
TYR 1470.0134
PHE 1480.0171
PRO 1490.0181
GLU 1500.0186
PRO 1510.0231
VAL 1520.0169
THR 1530.0158
VAL 1540.0120
THR 1560.0163
TRP 1570.0148
ASN 1620.0202
SER 1630.0267
GLY 1640.0277
SER 1650.0222
LEU 1660.0180
SER 1670.0241
SER 1680.0241
GLY 1690.0199
VAL 1710.0084
HIS 1720.0067
THR 1730.0057
PHE 1740.0038
PRO 1750.0036
ALA 1760.0036
VAL 1770.0077
LEU 1780.0075
GLN 1790.0081
SER 1800.0161
ASP 1830.0108
LEU 1840.0105
TYR 1850.0098
THR 1860.0046
LEU 1870.0049
SER 1880.0052
SER 1890.0052
SER 1900.0068
VAL 1910.0090
THR 1920.0177
VAL 1930.0223
PRO 1940.0316
SER 1950.0274
SER 1960.0204
PRO 1980.0118
ARG 1990.0061
PRO 2000.0088
SER 2020.0092
GLU 2030.0140
THR 2040.0165
VAL 2050.0110
THR 2060.0123
CYS 2080.0111
ASN 2090.0109
VAL 2100.0085
ALA 2110.0172
HIS 2120.0210
PRO 2130.0301
ALA 2140.0315
SER 2150.0303
SER 2160.0347
THR 2170.0220
LYS 2180.0151
VAL 2190.0077
ASP 2200.0098
LYS 2210.0074
LYS 2220.0098
ILE 2230.0051
VAL 2260.0064
PRO 2270.0079
ARG 2280.0076
ASP 2320.0117
CYS 2330.0088
SER 20.0061
VAL 30.0064
LEU 40.0055
SER 50.0056
GLN 60.0057
SER 70.0067
PRO 80.0117
ALA 90.0142
ILE 100.0169
LEU 110.0164
SER 120.0187
ALA 130.0191
SER 140.0220
PRO 150.0248
GLY 160.0248
GLU 170.0226
LYS 180.0196
VAL 190.0155
THR 200.0117
MET 210.0087
THR 220.0050
CYS 230.0028
ARG 240.0019
ALA 250.0034
ARG 260.0060
SER 270.0066
SER 290.0042
VAL 300.0024
SER 310.0028
TYR 320.0005
MET 330.0011
HIS 340.0018
TRP 350.0037
TYR 360.0055
GLN 370.0081
GLN 380.0074
LYS 390.0100
SER 400.0111
GLY 410.0069
SER 420.0036
SER 430.0030
PRO 440.0036
LYS 450.0039
PRO 460.0033
TRP 470.0070
ILE 480.0050
HIS 490.0023
ALA 500.0023
THR 510.0041
SER 520.0071
ASN 530.0075
LEU 540.0089
ALA 550.0078
SER 560.0116
GLY 570.0177
VAL 580.0154
PRO 590.0206
ALA 600.0211
ARG 610.0213
PHE 620.0148
SER 630.0128
GLY 640.0097
SER 650.0087
GLY 660.0073
SER 670.0075
GLY 680.0064
THR 690.0042
SER 700.0037
TYR 710.0046
SER 720.0062
LEU 730.0080
THR 740.0138
ILE 750.0177
SER 760.0214
ARG 770.0234
VAL 780.0219
GLU 790.0259
ALA 800.0215
GLU 810.0217
ASP 820.0188
ALA 830.0168
ALA 840.0142
THR 850.0113
TYR 860.0072
TYR 870.0053
CYS 880.0027
GLN 890.0031
GLN 900.0033
TRP 910.0031
SER 920.0078
SER 930.0089
HIS 940.0061
PRO 950.0035
PRO 960.0034
THR 970.0038
PHE 980.0054
GLY 990.0063
SER 1000.0079
GLY 1010.0099
THR 1020.0108
LYS 1030.0140
LEU 1040.0169
GLU 1050.0185
ILE 1060.0194
LYS 1070.0200
ARG 1080.0170
ALA 1090.0151
ASP 1100.0156
ALA 1110.0122
ALA 1120.0111
PRO 1130.0062
THR 1140.0046
VAL 1150.0012
SER 1160.0028
ILE 1170.0026
PHE 1180.0031
PRO 1190.0053
PRO 1200.0074
SER 1210.0094
SER 1220.0191
GLU 1230.0156
GLN 1240.0148
LEU 1250.0249
THR 1260.0324
SER 1270.0327
GLY 1280.0330
GLY 1290.0246
ALA 1300.0161
SER 1310.0082
VAL 1320.0042
VAL 1330.0012
CYS 1340.0034
PHE 1350.0022
LEU 1360.0024
ASN 1370.0050
ASN 1380.0062
PHE 1390.0088
TYR 1400.0139
PRO 1410.0156
LYS 1420.0153
ASP 1430.0146
ILE 1440.0099
ASN 1450.0096
VAL 1460.0055
LYS 1470.0084
TRP 1480.0081
LYS 1490.0101
ILE 1500.0049
ASP 1510.0048
GLY 1520.0148
SER 1530.0185
GLU 1540.0188
ARG 1550.0178
GLN 1560.0180
ASN 1570.0249
GLY 1580.0166
VAL 1590.0108
LEU 1600.0066
ASN 1610.0054
SER 1620.0058
TRP 1630.0049
THR 1640.0109
ASP 1650.0119
GLN 1660.0115
ASP 1670.0155
SER 1680.0178
LYS 1690.0185
ASP 1700.0120
SER 1710.0125
THR 1720.0116
TYR 1730.0088
SER 1740.0070
MET 1750.0077
SER 1760.0025
SER 1770.0023
THR 1780.0032
LEU 1790.0087
THR 1800.0131
LEU 1810.0170
THR 1820.0289
LYS 1830.0286
ASP 1840.0317
GLU 1850.0226
TYR 1860.0180
GLU 1870.0216
ARG 1880.0177
HIS 1890.0099
ASN 1900.0102
SER 1910.0064
TYR 1920.0020
THR 1930.0053
CYS 1940.0052
GLU 1950.0061
ALA 1960.0036
THR 1970.0076
HIS 1980.0101
LYS 1990.0152
THR 2000.0158
SER 2010.0149
THR 2020.0192
SER 2030.0025
PRO 2040.0041
ILE 2050.0031
VAL 2060.0057
LYS 2070.0040
SER 2080.0049
PHE 2090.0071
ASN 2100.0103
ARG 2110.0128
ASN 2120.0170
GLU 2130.0092
CYS 2140.0149

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.