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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 24  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1077
ILE 4210.0232
PHE 4220.0208
ILE 4230.0166
SER 4240.0156
ASN 4250.0156
ASP 4260.0156
LYS 4270.0117
GLU 4280.0113
SER 4290.0143
ILE 4300.0135
LYS 4310.0118
CYS 4320.0088
PRO 4330.0040
CYS 4340.0039
GLU 4350.0043
PRO 4360.0094
GLU 4370.0089
ARG 4380.0092
ILE 4390.0181
SER 4400.0205
GLU 4410.0273
SER 4420.0510
THR 4430.0410
CYS 4440.0187
ASN 4450.0118
PHE 4460.0113
TYR 4470.0122
VAL 4480.0081
CYS 4490.0064
ASN 4500.0046
CYS 4510.0036
VAL 4520.0127
GLU 4530.0225
LYS 4540.1077
GLU 10.0125
VAL 20.0089
GLN 30.0112
LEU 40.0085
VAL 50.0112
GLU 60.0114
SER 70.0151
GLY 80.0159
GLY 90.0136
GLY 100.0153
LEU 110.0175
VAL 120.0162
LYS 130.0189
PRO 140.0154
GLY 150.0125
GLY 160.0151
SER 170.0145
LEU 180.0152
LYS 190.0152
LEU 200.0133
SER 210.0138
CYS 220.0118
ALA 230.0125
ALA 240.0092
SER 250.0091
GLY 260.0090
PHE 270.0054
ILE 280.0037
PHE 290.0034
SER 300.0031
ASP 310.0036
TYR 320.0026
TYR 330.0023
MET 340.0038
TYR 350.0037
TRP 360.0047
VAL 370.0034
ARG 380.0026
GLN 390.0030
THR 400.0043
PRO 410.0070
GLU 420.0083
LYS 430.0056
ARG 440.0060
LEU 450.0046
GLU 460.0025
TRP 470.0026
VAL 480.0031
ALA 490.0044
THR 500.0038
ILE 510.0049
SER 520.0043
ASP 520.0038
GLY 530.0043
ASN 540.0044
SER 550.0029
TYR 560.0049
THR 570.0062
TYR 580.0030
TYR 590.0045
VAL 600.0044
ASP 610.0088
SER 620.0060
VAL 630.0058
LYS 640.0097
GLY 650.0129
ARG 660.0104
PHE 670.0097
THR 680.0116
ILE 690.0099
SER 700.0123
ARG 710.0111
ASP 720.0142
ASN 730.0115
ALA 740.0156
LYS 750.0172
ASN 760.0112
ASN 770.0123
LEU 780.0103
TYR 790.0123
LEU 800.0110
GLN 810.0139
MET 820.0112
SER 820.0117
SER 820.0089
LEU 820.0084
LYS 830.0083
SER 840.0130
GLU 850.0101
ASP 860.0064
THR 870.0091
ALA 880.0073
ILE 890.0069
TYR 900.0056
TYR 910.0045
CYS 920.0053
ALA 930.0040
ARG 940.0032
ASP 950.0030
GLY 960.0041
PRO 970.0037
THR 980.0035
ASP 990.0035
SER 1000.0031
SER 1000.0029
GLY 1000.0024
TYR 1000.0023
GLY 1000.0027
GLY 1000.0032
PHE 1000.0038
GLY 1010.0039
TYR 1020.0046
TRP 1030.0042
GLY 1040.0061
GLN 1050.0070
GLY 1060.0082
THR 1070.0103
LEU 1080.0117
VAL 1090.0117
THR 1100.0153
VAL 1110.0152
SER 1120.0215
GLU 1130.0247
ALA 1140.0213
LYS 1150.0156
THR 1160.0144
THR 1170.0102
PRO 1180.0120
PRO 1190.0073
SER 1200.0062
VAL 1210.0033
TYR 1220.0034
PRO 1230.0034
LEU 1240.0027
ALA 1250.0020
PRO 1260.0018
GLY 1270.0021
SER 1280.0062
ALA 1290.0091
ALA 1300.0074
GLN 1330.0169
THR 1340.0151
ASN 1350.0163
SER 1360.0125
MET 1370.0086
VAL 1380.0055
THR 1390.0023
LEU 1400.0027
GLY 1410.0036
CYS 1420.0034
LEU 1430.0032
VAL 1440.0019
LYS 1450.0026
GLY 1460.0030
TYR 1470.0063
PHE 1480.0130
PRO 1490.0157
GLU 1500.0166
PRO 1510.0205
VAL 1520.0144
THR 1530.0134
VAL 1540.0052
THR 1560.0051
TRP 1570.0043
ASN 1620.0046
SER 1630.0052
GLY 1640.0061
SER 1650.0055
LEU 1660.0045
SER 1670.0044
SER 1680.0035
GLY 1690.0041
VAL 1710.0053
HIS 1720.0050
THR 1730.0051
PHE 1740.0054
PRO 1750.0049
ALA 1760.0071
VAL 1770.0088
LEU 1780.0105
GLN 1790.0105
SER 1800.0134
ASP 1830.0127
LEU 1840.0088
TYR 1850.0084
THR 1860.0052
LEU 1870.0041
SER 1880.0039
SER 1890.0041
SER 1900.0037
VAL 1910.0033
THR 1920.0039
VAL 1930.0033
PRO 1940.0054
SER 1950.0072
SER 1960.0063
PRO 1980.0047
ARG 1990.0042
PRO 2000.0048
SER 2020.0064
GLU 2030.0055
THR 2040.0048
VAL 2050.0034
THR 2060.0041
CYS 2080.0038
ASN 2090.0053
VAL 2100.0078
ALA 2110.0156
HIS 2120.0173
PRO 2130.0259
ALA 2140.0255
SER 2150.0218
SER 2160.0276
THR 2170.0204
LYS 2180.0182
VAL 2190.0125
ASP 2200.0052
LYS 2210.0043
LYS 2220.0038
ILE 2230.0033
VAL 2260.0029
PRO 2270.0030
ARG 2280.0029
ASP 2320.0040
CYS 2330.0047
SER 20.0103
VAL 30.0099
LEU 40.0073
SER 50.0109
GLN 60.0102
SER 70.0119
PRO 80.0179
ALA 90.0198
ILE 100.0216
LEU 110.0208
SER 120.0224
ALA 130.0211
SER 140.0220
PRO 150.0185
GLY 160.0180
GLU 170.0206
LYS 180.0177
VAL 190.0165
THR 200.0122
MET 210.0113
THR 220.0089
CYS 230.0064
ARG 240.0070
ALA 250.0089
ARG 260.0131
SER 270.0131
SER 290.0106
VAL 300.0089
SER 310.0092
TYR 320.0055
MET 330.0043
HIS 340.0038
TRP 350.0042
TYR 360.0052
GLN 370.0060
GLN 380.0074
LYS 390.0085
SER 400.0087
GLY 410.0067
SER 420.0045
SER 430.0035
PRO 440.0042
LYS 450.0042
PRO 460.0041
TRP 470.0043
ILE 480.0035
HIS 490.0034
ALA 500.0042
THR 510.0037
SER 520.0041
ASN 530.0032
LEU 540.0030
ALA 550.0034
SER 560.0030
GLY 570.0024
VAL 580.0033
PRO 590.0043
ALA 600.0065
ARG 610.0089
PHE 620.0064
SER 630.0051
GLY 640.0038
SER 650.0048
GLY 660.0039
SER 670.0058
GLY 680.0080
THR 690.0070
SER 700.0042
TYR 710.0036
SER 720.0052
LEU 730.0062
THR 740.0099
ILE 750.0112
SER 760.0136
ARG 770.0153
VAL 780.0153
GLU 790.0148
ALA 800.0152
GLU 810.0130
ASP 820.0122
ALA 830.0138
ALA 840.0129
THR 850.0119
TYR 860.0076
TYR 870.0070
CYS 880.0055
GLN 890.0042
GLN 900.0048
TRP 910.0041
SER 920.0105
SER 930.0107
HIS 940.0062
PRO 950.0029
PRO 960.0033
THR 970.0033
PHE 980.0069
GLY 990.0076
SER 1000.0091
GLY 1010.0132
THR 1020.0135
LYS 1030.0160
LEU 1040.0177
GLU 1050.0196
ILE 1060.0192
LYS 1070.0212
ARG 1080.0193
ALA 1090.0184
ASP 1100.0165
ALA 1110.0142
ALA 1120.0113
PRO 1130.0079
THR 1140.0066
VAL 1150.0040
SER 1160.0023
ILE 1170.0019
PHE 1180.0019
PRO 1190.0016
PRO 1200.0014
SER 1210.0012
SER 1220.0016
GLU 1230.0017
GLN 1240.0018
LEU 1250.0020
THR 1260.0020
SER 1270.0027
GLY 1280.0038
GLY 1290.0029
ALA 1300.0020
SER 1310.0013
VAL 1320.0014
VAL 1330.0020
CYS 1340.0032
PHE 1350.0039
LEU 1360.0042
ASN 1370.0077
ASN 1380.0101
PHE 1390.0106
TYR 1400.0143
PRO 1410.0144
LYS 1420.0135
ASP 1430.0106
ILE 1440.0071
ASN 1450.0036
VAL 1460.0030
LYS 1470.0026
TRP 1480.0017
LYS 1490.0038
ILE 1500.0051
ASP 1510.0056
GLY 1520.0057
SER 1530.0041
GLU 1540.0065
ARG 1550.0056
GLN 1560.0053
ASN 1570.0049
GLY 1580.0041
VAL 1590.0031
LEU 1600.0030
ASN 1610.0045
SER 1620.0056
TRP 1630.0057
THR 1640.0121
ASP 1650.0142
GLN 1660.0148
ASP 1670.0178
SER 1680.0197
LYS 1690.0238
ASP 1700.0199
SER 1710.0181
THR 1720.0158
TYR 1730.0118
SER 1740.0090
MET 1750.0075
SER 1760.0038
SER 1770.0027
THR 1780.0026
LEU 1790.0004
THR 1800.0017
LEU 1810.0037
THR 1820.0064
LYS 1830.0059
ASP 1840.0079
GLU 1850.0081
TYR 1860.0064
GLU 1870.0078
ARG 1880.0099
HIS 1890.0083
ASN 1900.0072
SER 1910.0049
TYR 1920.0034
THR 1930.0019
CYS 1940.0014
GLU 1950.0033
ALA 1960.0044
THR 1970.0061
HIS 1980.0091
LYS 1990.0129
THR 2000.0144
SER 2010.0134
THR 2020.0147
SER 2030.0120
PRO 2040.0080
ILE 2050.0065
VAL 2060.0032
LYS 2070.0020
SER 2080.0021
PHE 2090.0038
ASN 2100.0057
ARG 2110.0060
ASN 2120.0057
GLU 2130.0056
CYS 2140.0056

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.