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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 25  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0727
ILE 4210.0380
PHE 4220.0393
ILE 4230.0341
SER 4240.0240
ASN 4250.0220
ASP 4260.0199
LYS 4270.0181
GLU 4280.0168
SER 4290.0218
ILE 4300.0198
LYS 4310.0176
CYS 4320.0148
PRO 4330.0077
CYS 4340.0058
GLU 4350.0047
PRO 4360.0177
GLU 4370.0177
ARG 4380.0177
ILE 4390.0332
SER 4400.0325
GLU 4410.0325
SER 4420.0727
THR 4430.0702
CYS 4440.0318
ASN 4450.0230
PHE 4460.0221
TYR 4470.0247
VAL 4480.0206
CYS 4490.0158
ASN 4500.0100
CYS 4510.0067
VAL 4520.0107
GLU 4530.0124
LYS 4540.0422
GLU 10.0108
VAL 20.0068
GLN 30.0068
LEU 40.0037
VAL 50.0036
GLU 60.0037
SER 70.0006
GLY 80.0012
GLY 90.0034
GLY 100.0074
LEU 110.0098
VAL 120.0097
LYS 130.0131
PRO 140.0143
GLY 150.0111
GLY 160.0063
SER 170.0046
LEU 180.0031
LYS 190.0046
LEU 200.0038
SER 210.0038
CYS 220.0045
ALA 230.0047
ALA 240.0040
SER 250.0069
GLY 260.0079
PHE 270.0066
ILE 280.0066
PHE 290.0048
SER 300.0038
ASP 310.0048
TYR 320.0031
TYR 330.0028
MET 340.0025
TYR 350.0027
TRP 360.0033
VAL 370.0047
ARG 380.0044
GLN 390.0043
THR 400.0079
PRO 410.0099
GLU 420.0105
LYS 430.0062
ARG 440.0073
LEU 450.0065
GLU 460.0037
TRP 470.0034
VAL 480.0028
ALA 490.0034
THR 500.0034
ILE 510.0038
SER 520.0055
ASP 520.0044
GLY 530.0069
ASN 540.0095
SER 550.0085
TYR 560.0088
THR 570.0068
TYR 580.0049
TYR 590.0043
VAL 600.0037
ASP 610.0111
SER 620.0105
VAL 630.0082
LYS 640.0113
GLY 650.0119
ARG 660.0103
PHE 670.0069
THR 680.0073
ILE 690.0064
SER 700.0067
ARG 710.0055
ASP 720.0060
ASN 730.0050
ALA 740.0066
LYS 750.0073
ASN 760.0052
ASN 770.0053
LEU 780.0048
TYR 790.0053
LEU 800.0055
GLN 810.0063
MET 820.0067
SER 820.0073
SER 820.0096
LEU 820.0095
LYS 830.0133
SER 840.0150
GLU 850.0140
ASP 860.0103
THR 870.0098
ALA 880.0063
ILE 890.0042
TYR 900.0037
TYR 910.0030
CYS 920.0034
ALA 930.0035
ARG 940.0022
ASP 950.0016
GLY 960.0024
PRO 970.0025
THR 980.0022
ASP 990.0035
SER 1000.0031
SER 1000.0026
GLY 1000.0025
TYR 1000.0034
GLY 1000.0035
GLY 1000.0037
PHE 1000.0036
GLY 1010.0035
TYR 1020.0036
TRP 1030.0036
GLY 1040.0029
GLN 1050.0028
GLY 1060.0021
THR 1070.0028
LEU 1080.0048
VAL 1090.0060
THR 1100.0091
VAL 1110.0109
SER 1120.0154
GLU 1130.0203
ALA 1140.0199
LYS 1150.0187
THR 1160.0150
THR 1170.0147
PRO 1180.0108
PRO 1190.0060
SER 1200.0057
VAL 1210.0050
TYR 1220.0061
PRO 1230.0079
LEU 1240.0060
ALA 1250.0063
PRO 1260.0082
GLY 1270.0137
SER 1280.0235
ALA 1290.0276
ALA 1300.0272
GLN 1330.0369
THR 1340.0390
ASN 1350.0516
SER 1360.0474
MET 1370.0363
VAL 1380.0203
THR 1390.0050
LEU 1400.0030
GLY 1410.0051
CYS 1420.0063
LEU 1430.0060
VAL 1440.0052
LYS 1450.0051
GLY 1460.0039
TYR 1470.0074
PHE 1480.0100
PRO 1490.0085
GLU 1500.0061
PRO 1510.0078
VAL 1520.0073
THR 1530.0085
VAL 1540.0074
THR 1560.0107
TRP 1570.0120
ASN 1620.0192
SER 1630.0233
GLY 1640.0223
SER 1650.0196
LEU 1660.0149
SER 1670.0181
SER 1680.0180
GLY 1690.0116
VAL 1710.0022
HIS 1720.0039
THR 1730.0063
PHE 1740.0088
PRO 1750.0088
ALA 1760.0072
VAL 1770.0060
LEU 1780.0072
GLN 1790.0096
SER 1800.0160
ASP 1830.0121
LEU 1840.0088
TYR 1850.0046
THR 1860.0043
LEU 1870.0057
SER 1880.0074
SER 1890.0062
SER 1900.0031
VAL 1910.0022
THR 1920.0130
VAL 1930.0235
PRO 1940.0349
SER 1950.0249
SER 1960.0287
PRO 1980.0261
ARG 1990.0113
PRO 2000.0111
SER 2020.0259
GLU 2030.0336
THR 2040.0282
VAL 2050.0149
THR 2060.0151
CYS 2080.0107
ASN 2090.0113
VAL 2100.0070
ALA 2110.0100
HIS 2120.0097
PRO 2130.0121
ALA 2140.0126
SER 2150.0124
SER 2160.0132
THR 2170.0064
LYS 2180.0089
VAL 2190.0088
ASP 2200.0127
LYS 2210.0125
LYS 2220.0172
ILE 2230.0118
VAL 2260.0097
PRO 2270.0093
ARG 2280.0114
ASP 2320.0095
CYS 2330.0278
SER 20.0200
VAL 30.0186
LEU 40.0149
SER 50.0138
GLN 60.0067
SER 70.0022
PRO 80.0089
ALA 90.0117
ILE 100.0150
LEU 110.0176
SER 120.0227
ALA 130.0246
SER 140.0297
PRO 150.0278
GLY 160.0359
GLU 170.0359
LYS 180.0296
VAL 190.0199
THR 200.0120
MET 210.0050
THR 220.0051
CYS 230.0113
ARG 240.0176
ALA 250.0217
ARG 260.0293
SER 270.0313
SER 290.0264
VAL 300.0201
SER 310.0207
TYR 320.0121
MET 330.0112
HIS 340.0093
TRP 350.0080
TYR 360.0062
GLN 370.0051
GLN 380.0021
LYS 390.0033
SER 400.0050
GLY 410.0048
SER 420.0036
SER 430.0030
PRO 440.0039
LYS 450.0054
PRO 460.0078
TRP 470.0102
ILE 480.0109
HIS 490.0115
ALA 500.0145
THR 510.0139
SER 520.0151
ASN 530.0151
LEU 540.0154
ALA 550.0179
SER 560.0247
GLY 570.0246
VAL 580.0200
PRO 590.0252
ALA 600.0274
ARG 610.0253
PHE 620.0184
SER 630.0166
GLY 640.0135
SER 650.0201
GLY 660.0214
SER 670.0266
GLY 680.0301
THR 690.0263
SER 700.0223
TYR 710.0146
SER 720.0109
LEU 730.0109
THR 740.0138
ILE 750.0194
SER 760.0285
ARG 770.0331
VAL 780.0227
GLU 790.0214
ALA 800.0122
GLU 810.0072
ASP 820.0076
ALA 830.0054
ALA 840.0037
THR 850.0036
TYR 860.0025
TYR 870.0045
CYS 880.0073
GLN 890.0091
GLN 900.0080
TRP 910.0050
SER 920.0013
SER 930.0013
HIS 940.0035
PRO 950.0041
PRO 960.0039
THR 970.0084
PHE 980.0079
GLY 990.0074
SER 1000.0063
GLY 1010.0057
THR 1020.0043
LYS 1030.0079
LEU 1040.0098
GLU 1050.0135
ILE 1060.0141
LYS 1070.0194
ARG 1080.0119
ALA 1090.0153
ASP 1100.0180
ALA 1110.0173
ALA 1120.0161
PRO 1130.0109
THR 1140.0087
VAL 1150.0074
SER 1160.0048
ILE 1170.0036
PHE 1180.0035
PRO 1190.0052
PRO 1200.0058
SER 1210.0061
SER 1220.0137
GLU 1230.0093
GLN 1240.0093
LEU 1250.0186
THR 1260.0239
SER 1270.0247
GLY 1280.0264
GLY 1290.0186
ALA 1300.0114
SER 1310.0070
VAL 1320.0045
VAL 1330.0058
CYS 1340.0060
PHE 1350.0074
LEU 1360.0085
ASN 1370.0093
ASN 1380.0109
PHE 1390.0108
TYR 1400.0129
PRO 1410.0120
LYS 1420.0104
ASP 1430.0117
ILE 1440.0109
ASN 1450.0112
VAL 1460.0154
LYS 1470.0154
TRP 1480.0120
LYS 1490.0175
ILE 1500.0152
ASP 1510.0223
GLY 1520.0295
SER 1530.0292
GLU 1540.0260
ARG 1550.0228
GLN 1560.0149
ASN 1570.0174
GLY 1580.0117
VAL 1590.0110
LEU 1600.0112
ASN 1610.0095
SER 1620.0094
TRP 1630.0092
THR 1640.0103
ASP 1650.0091
GLN 1660.0090
ASP 1670.0104
SER 1680.0081
LYS 1690.0117
ASP 1700.0124
SER 1710.0108
THR 1720.0125
TYR 1730.0097
SER 1740.0096
MET 1750.0095
SER 1760.0095
SER 1770.0091
THR 1780.0084
LEU 1790.0070
THR 1800.0087
LEU 1810.0092
THR 1820.0173
LYS 1830.0207
ASP 1840.0235
GLU 1850.0141
TYR 1860.0137
GLU 1870.0217
ARG 1880.0216
HIS 1890.0203
ASN 1900.0231
SER 1910.0180
TYR 1920.0120
THR 1930.0131
CYS 1940.0095
GLU 1950.0127
ALA 1960.0142
THR 1970.0109
HIS 1980.0126
LYS 1990.0163
THR 2000.0201
SER 2010.0189
THR 2020.0220
SER 2030.0154
PRO 2040.0139
ILE 2050.0110
VAL 2060.0118
LYS 2070.0077
SER 2080.0074
PHE 2090.0112
ASN 2100.0165
ARG 2110.0174
ASN 2120.0236
GLU 2130.0097
CYS 2140.0219

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.