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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 28  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1360
ILE 4210.0170
PHE 4220.0204
ILE 4230.0184
SER 4240.0135
ASN 4250.0130
ASP 4260.0104
LYS 4270.0078
GLU 4280.0041
SER 4290.0065
ILE 4300.0082
LYS 4310.0048
CYS 4320.0050
PRO 4330.0038
CYS 4340.0052
GLU 4350.0060
PRO 4360.0104
GLU 4370.0115
ARG 4380.0116
ILE 4390.0180
SER 4400.0121
GLU 4410.0071
SER 4420.0419
THR 4430.0412
CYS 4440.0135
ASN 4450.0121
PHE 4460.0126
TYR 4470.0154
VAL 4480.0142
CYS 4490.0097
ASN 4500.0065
CYS 4510.0054
VAL 4520.0050
GLU 4530.0039
LYS 4540.0040
GLU 10.0462
VAL 20.0257
GLN 30.0204
LEU 40.0083
VAL 50.0072
GLU 60.0063
SER 70.0104
GLY 80.0126
GLY 90.0137
GLY 100.0171
LEU 110.0178
VAL 120.0146
LYS 130.0152
PRO 140.0113
GLY 150.0134
GLY 160.0172
SER 170.0161
LEU 180.0142
LYS 190.0112
LEU 200.0075
SER 210.0059
CYS 220.0029
ALA 230.0071
ALA 240.0130
SER 250.0229
GLY 260.0297
PHE 270.0265
ILE 280.0239
PHE 290.0189
SER 300.0191
ASP 310.0129
TYR 320.0107
TYR 330.0082
MET 340.0057
TYR 350.0041
TRP 360.0029
VAL 370.0020
ARG 380.0042
GLN 390.0086
THR 400.0116
PRO 410.0193
GLU 420.0245
LYS 430.0184
ARG 440.0145
LEU 450.0082
GLU 460.0055
TRP 470.0042
VAL 480.0032
ALA 490.0051
THR 500.0060
ILE 510.0070
SER 520.0082
ASP 520.0097
GLY 530.0098
ASN 540.0095
SER 550.0083
TYR 560.0060
THR 570.0070
TYR 580.0070
TYR 590.0083
VAL 600.0096
ASP 610.0172
SER 620.0140
VAL 630.0118
LYS 640.0168
GLY 650.0188
ARG 660.0150
PHE 670.0097
THR 680.0096
ILE 690.0067
SER 700.0092
ARG 710.0106
ASP 720.0137
ASN 730.0193
ALA 740.0227
LYS 750.0186
ASN 760.0164
ASN 770.0098
LEU 780.0063
TYR 790.0058
LEU 800.0065
GLN 810.0099
MET 820.0109
SER 820.0148
SER 820.0148
LEU 820.0092
LYS 830.0051
SER 840.0048
GLU 850.0046
ASP 860.0030
THR 870.0075
ALA 880.0085
ILE 890.0089
TYR 900.0052
TYR 910.0022
CYS 920.0009
ALA 930.0032
ARG 940.0062
ASP 950.0050
GLY 960.0066
PRO 970.0063
THR 980.0056
ASP 990.0067
SER 1000.0041
SER 1000.0034
GLY 1000.0028
TYR 1000.0030
GLY 1000.0029
GLY 1000.0035
PHE 1000.0038
GLY 1010.0043
TYR 1020.0047
TRP 1030.0042
GLY 1040.0051
GLN 1050.0064
GLY 1060.0102
THR 1070.0105
LEU 1080.0131
VAL 1090.0121
THR 1100.0140
VAL 1110.0115
SER 1120.0150
GLU 1130.0179
ALA 1140.0219
LYS 1150.0204
THR 1160.0210
THR 1170.0205
PRO 1180.0166
PRO 1190.0095
SER 1200.0042
VAL 1210.0057
TYR 1220.0069
PRO 1230.0104
LEU 1240.0059
ALA 1250.0052
PRO 1260.0054
GLY 1270.0110
SER 1280.0218
ALA 1290.0359
ALA 1300.0139
GLN 1330.0233
THR 1340.0173
ASN 1350.0175
SER 1360.0323
MET 1370.0248
VAL 1380.0148
THR 1390.0052
LEU 1400.0039
GLY 1410.0068
CYS 1420.0076
LEU 1430.0043
VAL 1440.0022
LYS 1450.0045
GLY 1460.0101
TYR 1470.0136
PHE 1480.0208
PRO 1490.0219
GLU 1500.0218
PRO 1510.0225
VAL 1520.0155
THR 1530.0147
VAL 1540.0093
THR 1560.0128
TRP 1570.0108
ASN 1620.0123
SER 1630.0207
GLY 1640.0225
SER 1650.0171
LEU 1660.0156
SER 1670.0236
SER 1680.0251
GLY 1690.0197
VAL 1710.0082
HIS 1720.0063
THR 1730.0045
PHE 1740.0081
PRO 1750.0103
ALA 1760.0098
VAL 1770.0166
LEU 1780.0212
GLN 1790.0224
SER 1800.0294
ASP 1830.0251
LEU 1840.0192
TYR 1850.0165
THR 1860.0062
LEU 1870.0058
SER 1880.0060
SER 1890.0068
SER 1900.0064
VAL 1910.0068
THR 1920.0160
VAL 1930.0222
PRO 1940.0325
SER 1950.0357
SER 1960.0478
PRO 1980.0310
ARG 1990.0238
PRO 2000.0255
SER 2020.0431
GLU 2030.0301
THR 2040.0101
VAL 2050.0025
THR 2060.0073
CYS 2080.0102
ASN 2090.0101
VAL 2100.0066
ALA 2110.0128
HIS 2120.0168
PRO 2130.0231
ALA 2140.0276
SER 2150.0245
SER 2160.0244
THR 2170.0123
LYS 2180.0068
VAL 2190.0057
ASP 2200.0107
LYS 2210.0083
LYS 2220.0046
ILE 2230.0056
VAL 2260.0141
PRO 2270.0047
ARG 2280.0074
ASP 2320.0469
CYS 2330.1360
SER 20.0076
VAL 30.0063
LEU 40.0057
SER 50.0116
GLN 60.0119
SER 70.0126
PRO 80.0197
ALA 90.0220
ILE 100.0217
LEU 110.0205
SER 120.0182
ALA 130.0165
SER 140.0170
PRO 150.0120
GLY 160.0106
GLU 170.0107
LYS 180.0102
VAL 190.0128
THR 200.0107
MET 210.0116
THR 220.0107
CYS 230.0082
ARG 240.0068
ALA 250.0066
ARG 260.0072
SER 270.0091
SER 290.0087
VAL 300.0074
SER 310.0075
TYR 320.0049
MET 330.0050
HIS 340.0055
TRP 350.0077
TYR 360.0090
GLN 370.0103
GLN 380.0127
LYS 390.0149
SER 400.0177
GLY 410.0205
SER 420.0151
SER 430.0090
PRO 440.0094
LYS 450.0093
PRO 460.0066
TRP 470.0090
ILE 480.0065
HIS 490.0050
ALA 500.0052
THR 510.0056
SER 520.0060
ASN 530.0057
LEU 540.0070
ALA 550.0081
SER 560.0132
GLY 570.0125
VAL 580.0101
PRO 590.0078
ALA 600.0073
ARG 610.0062
PHE 620.0081
SER 630.0073
GLY 640.0074
SER 650.0072
GLY 660.0071
SER 670.0073
GLY 680.0084
THR 690.0068
SER 700.0071
TYR 710.0063
SER 720.0077
LEU 730.0087
THR 740.0100
ILE 750.0080
SER 760.0059
ARG 770.0055
VAL 780.0067
GLU 790.0042
ALA 800.0037
GLU 810.0040
ASP 820.0079
ALA 830.0097
ALA 840.0123
THR 850.0149
TYR 860.0116
TYR 870.0106
CYS 880.0085
GLN 890.0045
GLN 900.0043
TRP 910.0038
SER 920.0043
SER 930.0047
HIS 940.0047
PRO 950.0051
PRO 960.0038
THR 970.0039
PHE 980.0067
GLY 990.0075
SER 1000.0098
GLY 1010.0166
THR 1020.0159
LYS 1030.0166
LEU 1040.0159
GLU 1050.0142
ILE 1060.0117
LYS 1070.0206
ARG 1080.0201
ALA 1090.0221
ASP 1100.0211
ALA 1110.0186
ALA 1120.0154
PRO 1130.0087
THR 1140.0100
VAL 1150.0096
SER 1160.0073
ILE 1170.0074
PHE 1180.0075
PRO 1190.0086
PRO 1200.0099
SER 1210.0112
SER 1220.0167
GLU 1230.0196
GLN 1240.0168
LEU 1250.0152
THR 1260.0210
SER 1270.0277
GLY 1280.0275
GLY 1290.0238
ALA 1300.0154
SER 1310.0100
VAL 1320.0082
VAL 1330.0088
CYS 1340.0073
PHE 1350.0071
LEU 1360.0072
ASN 1370.0076
ASN 1380.0096
PHE 1390.0109
TYR 1400.0147
PRO 1410.0155
LYS 1420.0121
ASP 1430.0089
ILE 1440.0054
ASN 1450.0113
VAL 1460.0124
LYS 1470.0141
TRP 1480.0112
LYS 1490.0104
ILE 1500.0065
ASP 1510.0142
GLY 1520.0179
SER 1530.0220
GLU 1540.0156
ARG 1550.0168
GLN 1560.0162
ASN 1570.0255
GLY 1580.0140
VAL 1590.0102
LEU 1600.0065
ASN 1610.0064
SER 1620.0069
TRP 1630.0073
THR 1640.0059
ASP 1650.0085
GLN 1660.0072
ASP 1670.0033
SER 1680.0029
LYS 1690.0043
ASP 1700.0087
SER 1710.0094
THR 1720.0102
TYR 1730.0090
SER 1740.0068
MET 1750.0055
SER 1760.0080
SER 1770.0074
THR 1780.0073
LEU 1790.0105
THR 1800.0156
LEU 1810.0171
THR 1820.0324
LYS 1830.0262
ASP 1840.0334
GLU 1850.0299
TYR 1860.0228
GLU 1870.0267
ARG 1880.0322
HIS 1890.0240
ASN 1900.0217
SER 1910.0126
TYR 1920.0068
THR 1930.0062
CYS 1940.0097
GLU 1950.0128
ALA 1960.0118
THR 1970.0123
HIS 1980.0067
LYS 1990.0096
THR 2000.0150
SER 2010.0183
THR 2020.0233
SER 2030.0257
PRO 2040.0206
ILE 2050.0154
VAL 2060.0097
LYS 2070.0060
SER 2080.0046
PHE 2090.0044
ASN 2100.0116
ARG 2110.0162
ASN 2120.0252
GLU 2130.0138
CYS 2140.0418

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.