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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 30  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1675
ILE 4210.0147
PHE 4220.0141
ILE 4230.0152
SER 4240.0179
ASN 4250.0203
ASP 4260.0205
LYS 4270.0097
GLU 4280.0099
SER 4290.0099
ILE 4300.0107
LYS 4310.0087
CYS 4320.0074
PRO 4330.0076
CYS 4340.0076
GLU 4350.0070
PRO 4360.0094
GLU 4370.0083
ARG 4380.0091
ILE 4390.0054
SER 4400.0035
GLU 4410.0165
SER 4420.0356
THR 4430.0170
CYS 4440.0136
ASN 4450.0125
PHE 4460.0132
TYR 4470.0129
VAL 4480.0100
CYS 4490.0087
ASN 4500.0069
CYS 4510.0088
VAL 4520.0088
GLU 4530.0088
LYS 4540.0097
GLU 10.0561
VAL 20.0292
GLN 30.0291
LEU 40.0135
VAL 50.0144
GLU 60.0122
SER 70.0083
GLY 80.0072
GLY 90.0085
GLY 100.0071
LEU 110.0111
VAL 120.0100
LYS 130.0131
PRO 140.0145
GLY 150.0111
GLY 160.0073
SER 170.0054
LEU 180.0052
LYS 190.0076
LEU 200.0092
SER 210.0096
CYS 220.0114
ALA 230.0160
ALA 240.0182
SER 250.0293
GLY 260.0345
PHE 270.0260
ILE 280.0208
PHE 290.0168
SER 300.0148
ASP 310.0062
TYR 320.0035
TYR 330.0035
MET 340.0044
TYR 350.0066
TRP 360.0087
VAL 370.0079
ARG 380.0050
GLN 390.0022
THR 400.0029
PRO 410.0043
GLU 420.0101
LYS 430.0112
ARG 440.0068
LEU 450.0046
GLU 460.0044
TRP 470.0058
VAL 480.0072
ALA 490.0077
THR 500.0060
ILE 510.0033
SER 520.0028
ASP 520.0029
GLY 530.0054
ASN 540.0069
SER 550.0048
TYR 560.0038
THR 570.0043
TYR 580.0061
TYR 590.0066
VAL 600.0067
ASP 610.0074
SER 620.0062
VAL 630.0060
LYS 640.0086
GLY 650.0087
ARG 660.0078
PHE 670.0062
THR 680.0062
ILE 690.0064
SER 700.0011
ARG 710.0072
ASP 720.0151
ASN 730.0205
ALA 740.0282
LYS 750.0279
ASN 760.0215
ASN 770.0152
LEU 780.0086
TYR 790.0078
LEU 800.0075
GLN 810.0062
MET 820.0072
SER 820.0063
SER 820.0074
LEU 820.0082
LYS 830.0117
SER 840.0137
GLU 850.0121
ASP 860.0091
THR 870.0079
ALA 880.0069
ILE 890.0064
TYR 900.0079
TYR 910.0072
CYS 920.0078
ALA 930.0068
ARG 940.0065
ASP 950.0065
GLY 960.0071
PRO 970.0070
THR 980.0097
ASP 990.0126
SER 1000.0073
SER 1000.0071
GLY 1000.0078
TYR 1000.0092
GLY 1000.0091
GLY 1000.0088
PHE 1000.0081
GLY 1010.0073
TYR 1020.0067
TRP 1030.0055
GLY 1040.0077
GLN 1050.0098
GLY 1060.0110
THR 1070.0086
LEU 1080.0082
VAL 1090.0077
THR 1100.0102
VAL 1110.0119
SER 1120.0189
GLU 1130.0224
ALA 1140.0195
LYS 1150.0191
THR 1160.0183
THR 1170.0146
PRO 1180.0132
PRO 1190.0055
SER 1200.0104
VAL 1210.0110
TYR 1220.0112
PRO 1230.0104
LEU 1240.0092
ALA 1250.0073
PRO 1260.0063
GLY 1270.0059
SER 1280.0076
ALA 1290.0085
ALA 1300.0153
GLN 1330.0367
THR 1340.0293
ASN 1350.0406
SER 1360.0297
MET 1370.0250
VAL 1380.0147
THR 1390.0079
LEU 1400.0069
GLY 1410.0085
CYS 1420.0095
LEU 1430.0091
VAL 1440.0067
LYS 1450.0059
GLY 1460.0044
TYR 1470.0060
PHE 1480.0120
PRO 1490.0140
GLU 1500.0133
PRO 1510.0171
VAL 1520.0100
THR 1530.0085
VAL 1540.0040
THR 1560.0055
TRP 1570.0063
ASN 1620.0058
SER 1630.0060
GLY 1640.0058
SER 1650.0086
LEU 1660.0069
SER 1670.0065
SER 1680.0069
GLY 1690.0067
VAL 1710.0062
HIS 1720.0058
THR 1730.0067
PHE 1740.0046
PRO 1750.0039
ALA 1760.0038
VAL 1770.0034
LEU 1780.0048
GLN 1790.0045
SER 1800.0066
ASP 1830.0088
LEU 1840.0059
TYR 1850.0035
THR 1860.0039
LEU 1870.0046
SER 1880.0063
SER 1890.0075
SER 1900.0064
VAL 1910.0059
THR 1920.0119
VAL 1930.0144
PRO 1940.0210
SER 1950.0081
SER 1960.0177
PRO 1980.0168
ARG 1990.0087
PRO 2000.0110
SER 2020.0246
GLU 2030.0205
THR 2040.0071
VAL 2050.0031
THR 2060.0053
CYS 2080.0078
ASN 2090.0041
VAL 2100.0016
ALA 2110.0095
HIS 2120.0141
PRO 2130.0247
ALA 2140.0271
SER 2150.0251
SER 2160.0288
THR 2170.0181
LYS 2180.0120
VAL 2190.0085
ASP 2200.0065
LYS 2210.0074
LYS 2220.0048
ILE 2230.0055
VAL 2260.0054
PRO 2270.0088
ARG 2280.0146
ASP 2320.0598
CYS 2330.1675
SER 20.0124
VAL 30.0116
LEU 40.0104
SER 50.0155
GLN 60.0162
SER 70.0185
PRO 80.0275
ALA 90.0313
ILE 100.0309
LEU 110.0251
SER 120.0216
ALA 130.0163
SER 140.0140
PRO 150.0094
GLY 160.0125
GLU 170.0157
LYS 180.0142
VAL 190.0159
THR 200.0130
MET 210.0149
THR 220.0137
CYS 230.0113
ARG 240.0092
ALA 250.0096
ARG 260.0114
SER 270.0125
SER 290.0108
VAL 300.0103
SER 310.0100
TYR 320.0078
MET 330.0085
HIS 340.0100
TRP 350.0108
TYR 360.0135
GLN 370.0161
GLN 380.0170
LYS 390.0182
SER 400.0172
GLY 410.0183
SER 420.0141
SER 430.0064
PRO 440.0119
LYS 450.0137
PRO 460.0116
TRP 470.0144
ILE 480.0106
HIS 490.0095
ALA 500.0094
THR 510.0073
SER 520.0075
ASN 530.0106
LEU 540.0126
ALA 550.0153
SER 560.0338
GLY 570.0317
VAL 580.0189
PRO 590.0110
ALA 600.0092
ARG 610.0032
PHE 620.0055
SER 630.0043
GLY 640.0064
SER 650.0055
GLY 660.0056
SER 670.0067
GLY 680.0088
THR 690.0073
SER 700.0073
TYR 710.0065
SER 720.0076
LEU 730.0083
THR 740.0085
ILE 750.0060
SER 760.0073
ARG 770.0087
VAL 780.0061
GLU 790.0026
ALA 800.0049
GLU 810.0107
ASP 820.0120
ALA 830.0160
ALA 840.0188
THR 850.0205
TYR 860.0157
TYR 870.0146
CYS 880.0122
GLN 890.0098
GLN 900.0091
TRP 910.0083
SER 920.0085
SER 930.0089
HIS 940.0087
PRO 950.0085
PRO 960.0088
THR 970.0086
PHE 980.0098
GLY 990.0098
SER 1000.0125
GLY 1010.0221
THR 1020.0212
LYS 1030.0237
LEU 1040.0203
GLU 1050.0170
ILE 1060.0095
LYS 1070.0101
ARG 1080.0082
ALA 1090.0126
ASP 1100.0108
ALA 1110.0099
ALA 1120.0099
PRO 1130.0094
THR 1140.0074
VAL 1150.0075
SER 1160.0076
ILE 1170.0065
PHE 1180.0063
PRO 1190.0053
PRO 1200.0067
SER 1210.0101
SER 1220.0142
GLU 1230.0166
GLN 1240.0136
LEU 1250.0104
THR 1260.0161
SER 1270.0127
GLY 1280.0061
GLY 1290.0045
ALA 1300.0047
SER 1310.0050
VAL 1320.0049
VAL 1330.0061
CYS 1340.0047
PHE 1350.0068
LEU 1360.0084
ASN 1370.0080
ASN 1380.0096
PHE 1390.0100
TYR 1400.0103
PRO 1410.0089
LYS 1420.0106
ASP 1430.0141
ILE 1440.0129
ASN 1450.0121
VAL 1460.0081
LYS 1470.0069
TRP 1480.0062
LYS 1490.0101
ILE 1500.0063
ASP 1510.0075
GLY 1520.0187
SER 1530.0226
GLU 1540.0219
ARG 1550.0153
GLN 1560.0143
ASN 1570.0170
GLY 1580.0064
VAL 1590.0021
LEU 1600.0015
ASN 1610.0040
SER 1620.0050
TRP 1630.0064
THR 1640.0071
ASP 1650.0124
GLN 1660.0107
ASP 1670.0135
SER 1680.0153
LYS 1690.0184
ASP 1700.0141
SER 1710.0089
THR 1720.0092
TYR 1730.0077
SER 1740.0082
MET 1750.0076
SER 1760.0061
SER 1770.0047
THR 1780.0038
LEU 1790.0032
THR 1800.0037
LEU 1810.0067
THR 1820.0138
LYS 1830.0154
ASP 1840.0225
GLU 1850.0176
TYR 1860.0121
GLU 1870.0169
ARG 1880.0170
HIS 1890.0078
ASN 1900.0076
SER 1910.0069
TYR 1920.0056
THR 1930.0079
CYS 1940.0069
GLU 1950.0093
ALA 1960.0112
THR 1970.0143
HIS 1980.0154
LYS 1990.0191
THR 2000.0187
SER 2010.0241
THR 2020.0392
SER 2030.0197
PRO 2040.0133
ILE 2050.0101
VAL 2060.0094
LYS 2070.0075
SER 2080.0047
PHE 2090.0090
ASN 2100.0103
ARG 2110.0107
ASN 2120.0247
GLU 2130.0100
CYS 2140.0290

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.