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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 31  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0586
ILE 4210.0178
PHE 4220.0322
ILE 4230.0093
SER 4240.0079
ASN 4250.0141
ASP 4260.0173
LYS 4270.0129
GLU 4280.0155
SER 4290.0134
ILE 4300.0135
LYS 4310.0149
CYS 4320.0130
PRO 4330.0103
CYS 4340.0112
GLU 4350.0118
PRO 4360.0107
GLU 4370.0113
ARG 4380.0111
ILE 4390.0143
SER 4400.0141
GLU 4410.0299
SER 4420.0249
THR 4430.0185
CYS 4440.0272
ASN 4450.0088
PHE 4460.0058
TYR 4470.0059
VAL 4480.0104
CYS 4490.0084
ASN 4500.0056
CYS 4510.0088
VAL 4520.0108
GLU 4530.0119
LYS 4540.0123
GLU 10.0464
VAL 20.0278
GLN 30.0174
LEU 40.0075
VAL 50.0089
GLU 60.0100
SER 70.0147
GLY 80.0150
GLY 90.0142
GLY 100.0090
LEU 110.0078
VAL 120.0088
LYS 130.0088
PRO 140.0122
GLY 150.0126
GLY 160.0132
SER 170.0125
LEU 180.0127
LYS 190.0145
LEU 200.0107
SER 210.0098
CYS 220.0053
ALA 230.0038
ALA 240.0066
SER 250.0160
GLY 260.0265
PHE 270.0289
ILE 280.0290
PHE 290.0219
SER 300.0258
ASP 310.0209
TYR 320.0173
TYR 330.0137
MET 340.0088
TYR 350.0075
TRP 360.0055
VAL 370.0088
ARG 380.0109
GLN 390.0158
THR 400.0228
PRO 410.0369
GLU 420.0461
LYS 430.0290
ARG 440.0271
LEU 450.0179
GLU 460.0156
TRP 470.0130
VAL 480.0102
ALA 490.0097
THR 500.0120
ILE 510.0127
SER 520.0170
ASP 520.0165
GLY 530.0162
ASN 540.0169
SER 550.0169
TYR 560.0171
THR 570.0164
TYR 580.0144
TYR 590.0136
VAL 600.0148
ASP 610.0226
SER 620.0171
VAL 630.0105
LYS 640.0163
GLY 650.0166
ARG 660.0098
PHE 670.0059
THR 680.0091
ILE 690.0077
SER 700.0134
ARG 710.0158
ASP 720.0209
ASN 730.0273
ALA 740.0333
LYS 750.0244
ASN 760.0163
ASN 770.0115
LEU 780.0080
TYR 790.0088
LEU 800.0062
GLN 810.0105
MET 820.0074
SER 820.0093
SER 820.0090
LEU 820.0076
LYS 830.0063
SER 840.0084
GLU 850.0070
ASP 860.0047
THR 870.0082
ALA 880.0118
ILE 890.0128
TYR 900.0091
TYR 910.0088
CYS 920.0052
ALA 930.0074
ARG 940.0102
ASP 950.0100
GLY 960.0121
PRO 970.0080
THR 980.0081
ASP 990.0087
SER 1000.0066
SER 1000.0071
GLY 1000.0071
TYR 1000.0058
GLY 1000.0060
GLY 1000.0062
PHE 1000.0073
GLY 1010.0077
TYR 1020.0089
TRP 1030.0098
GLY 1040.0091
GLN 1050.0115
GLY 1060.0135
THR 1070.0127
LEU 1080.0119
VAL 1090.0103
THR 1100.0094
VAL 1110.0099
SER 1120.0117
GLU 1130.0090
ALA 1140.0139
LYS 1150.0163
THR 1160.0206
THR 1170.0192
PRO 1180.0209
PRO 1190.0113
SER 1200.0058
VAL 1210.0067
TYR 1220.0081
PRO 1230.0075
LEU 1240.0102
ALA 1250.0090
PRO 1260.0075
GLY 1270.0124
SER 1280.0168
ALA 1290.0294
ALA 1300.0182
GLN 1330.0158
THR 1340.0101
ASN 1350.0103
SER 1360.0236
MET 1370.0164
VAL 1380.0083
THR 1390.0014
LEU 1400.0045
GLY 1410.0078
CYS 1420.0086
LEU 1430.0085
VAL 1440.0062
LYS 1450.0030
GLY 1460.0063
TYR 1470.0143
PHE 1480.0201
PRO 1490.0218
GLU 1500.0242
PRO 1510.0353
VAL 1520.0263
THR 1530.0249
VAL 1540.0085
THR 1560.0115
TRP 1570.0140
ASN 1620.0207
SER 1630.0272
GLY 1640.0270
SER 1650.0271
LEU 1660.0190
SER 1670.0252
SER 1680.0250
GLY 1690.0180
VAL 1710.0079
HIS 1720.0055
THR 1730.0059
PHE 1740.0050
PRO 1750.0047
ALA 1760.0097
VAL 1770.0106
LEU 1780.0144
GLN 1790.0133
SER 1800.0195
ASP 1830.0159
LEU 1840.0143
TYR 1850.0144
THR 1860.0086
LEU 1870.0080
SER 1880.0079
SER 1890.0066
SER 1900.0043
VAL 1910.0050
THR 1920.0092
VAL 1930.0136
PRO 1940.0229
SER 1950.0268
SER 1960.0352
PRO 1980.0190
ARG 1990.0158
PRO 2000.0200
SER 2020.0305
GLU 2030.0148
THR 2040.0095
VAL 2050.0093
THR 2060.0131
CYS 2080.0121
ASN 2090.0085
VAL 2100.0097
ALA 2110.0247
HIS 2120.0299
PRO 2130.0463
ALA 2140.0466
SER 2150.0404
SER 2160.0485
THR 2170.0327
LYS 2180.0245
VAL 2190.0113
ASP 2200.0091
LYS 2210.0095
LYS 2220.0087
ILE 2230.0117
VAL 2260.0189
PRO 2270.0162
ARG 2280.0141
ASP 2320.0189
CYS 2330.0586
SER 20.0015
VAL 30.0026
LEU 40.0027
SER 50.0074
GLN 60.0072
SER 70.0100
PRO 80.0141
ALA 90.0120
ILE 100.0122
LEU 110.0194
SER 120.0210
ALA 130.0226
SER 140.0289
PRO 150.0237
GLY 160.0245
GLU 170.0264
LYS 180.0262
VAL 190.0250
THR 200.0171
MET 210.0128
THR 220.0133
CYS 230.0081
ARG 240.0094
ALA 250.0084
ARG 260.0085
SER 270.0090
SER 290.0097
VAL 300.0069
SER 310.0085
TYR 320.0063
MET 330.0055
HIS 340.0061
TRP 350.0079
TYR 360.0075
GLN 370.0060
GLN 380.0080
LYS 390.0098
SER 400.0179
GLY 410.0210
SER 420.0148
SER 430.0134
PRO 440.0117
LYS 450.0095
PRO 460.0097
TRP 470.0093
ILE 480.0089
HIS 490.0084
ALA 500.0110
THR 510.0098
SER 520.0130
ASN 530.0149
LEU 540.0163
ALA 550.0165
SER 560.0333
GLY 570.0304
VAL 580.0192
PRO 590.0156
ALA 600.0222
ARG 610.0190
PHE 620.0149
SER 630.0164
GLY 640.0137
SER 650.0147
GLY 660.0141
SER 670.0140
GLY 680.0126
THR 690.0117
SER 700.0125
TYR 710.0113
SER 720.0114
LEU 730.0115
THR 740.0200
ILE 750.0176
SER 760.0230
ARG 770.0220
VAL 780.0171
GLU 790.0131
ALA 800.0134
GLU 810.0080
ASP 820.0067
ALA 830.0060
ALA 840.0017
THR 850.0054
TYR 860.0051
TYR 870.0068
CYS 880.0084
GLN 890.0069
GLN 900.0067
TRP 910.0062
SER 920.0055
SER 930.0068
HIS 940.0087
PRO 950.0074
PRO 960.0078
THR 970.0082
PHE 980.0103
GLY 990.0107
SER 1000.0102
GLY 1010.0073
THR 1020.0078
LYS 1030.0065
LEU 1040.0130
GLU 1050.0140
ILE 1060.0155
LYS 1070.0261
ARG 1080.0259
ALA 1090.0282
ASP 1100.0255
ALA 1110.0228
ALA 1120.0191
PRO 1130.0115
THR 1140.0108
VAL 1150.0090
SER 1160.0061
ILE 1170.0085
PHE 1180.0107
PRO 1190.0128
PRO 1200.0127
SER 1210.0119
SER 1220.0127
GLU 1230.0133
GLN 1240.0147
LEU 1250.0201
THR 1260.0275
SER 1270.0301
GLY 1280.0222
GLY 1290.0191
ALA 1300.0135
SER 1310.0125
VAL 1320.0114
VAL 1330.0115
CYS 1340.0086
PHE 1350.0074
LEU 1360.0072
ASN 1370.0085
ASN 1380.0124
PHE 1390.0135
TYR 1400.0196
PRO 1410.0207
LYS 1420.0184
ASP 1430.0170
ILE 1440.0098
ASN 1450.0117
VAL 1460.0129
LYS 1470.0102
TRP 1480.0084
LYS 1490.0036
ILE 1500.0057
ASP 1510.0132
GLY 1520.0152
SER 1530.0089
GLU 1540.0112
ARG 1550.0088
GLN 1560.0084
ASN 1570.0120
GLY 1580.0110
VAL 1590.0120
LEU 1600.0113
ASN 1610.0112
SER 1620.0087
TRP 1630.0046
THR 1640.0065
ASP 1650.0077
GLN 1660.0092
ASP 1670.0089
SER 1680.0098
LYS 1690.0147
ASP 1700.0168
SER 1710.0154
THR 1720.0142
TYR 1730.0105
SER 1740.0073
MET 1750.0067
SER 1760.0089
SER 1770.0101
THR 1780.0116
LEU 1790.0116
THR 1800.0117
LEU 1810.0095
THR 1820.0138
LYS 1830.0105
ASP 1840.0079
GLU 1850.0092
TYR 1860.0075
GLU 1870.0124
ARG 1880.0173
HIS 1890.0163
ASN 1900.0188
SER 1910.0126
TYR 1920.0077
THR 1930.0076
CYS 1940.0102
GLU 1950.0109
ALA 1960.0121
THR 1970.0131
HIS 1980.0094
LYS 1990.0126
THR 2000.0182
SER 2010.0217
THR 2020.0257
SER 2030.0254
PRO 2040.0198
ILE 2050.0190
VAL 2060.0123
LYS 2070.0114
SER 2080.0085
PHE 2090.0149
ASN 2100.0171
ARG 2110.0191
ASN 2120.0271
GLU 2130.0273
CYS 2140.0313

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.