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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 33  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0807
ILE 4210.0164
PHE 4220.0191
ILE 4230.0135
SER 4240.0127
ASN 4250.0143
ASP 4260.0140
LYS 4270.0090
GLU 4280.0072
SER 4290.0081
ILE 4300.0067
LYS 4310.0049
CYS 4320.0048
PRO 4330.0043
CYS 4340.0042
GLU 4350.0040
PRO 4360.0061
GLU 4370.0062
ARG 4380.0073
ILE 4390.0103
SER 4400.0072
GLU 4410.0146
SER 4420.0386
THR 4430.0196
CYS 4440.0114
ASN 4450.0104
PHE 4460.0091
TYR 4470.0094
VAL 4480.0070
CYS 4490.0050
ASN 4500.0059
CYS 4510.0092
VAL 4520.0129
GLU 4530.0125
LYS 4540.0184
GLU 10.0113
VAL 20.0079
GLN 30.0080
LEU 40.0063
VAL 50.0057
GLU 60.0049
SER 70.0056
GLY 80.0072
GLY 90.0054
GLY 100.0099
LEU 110.0123
VAL 120.0140
LYS 130.0209
PRO 140.0133
GLY 150.0097
GLY 160.0129
SER 170.0136
LEU 180.0126
LYS 190.0094
LEU 200.0065
SER 210.0063
CYS 220.0066
ALA 230.0072
ALA 240.0082
SER 250.0094
GLY 260.0100
PHE 270.0082
ILE 280.0069
PHE 290.0069
SER 300.0058
ASP 310.0028
TYR 320.0029
TYR 330.0026
MET 340.0038
TYR 350.0048
TRP 360.0059
VAL 370.0062
ARG 380.0061
GLN 390.0068
THR 400.0113
PRO 410.0155
GLU 420.0163
LYS 430.0080
ARG 440.0097
LEU 450.0082
GLU 460.0065
TRP 470.0069
VAL 480.0064
ALA 490.0073
THR 500.0060
ILE 510.0052
SER 520.0027
ASP 520.0018
GLY 530.0029
ASN 540.0041
SER 550.0057
TYR 560.0042
THR 570.0071
TYR 580.0088
TYR 590.0126
VAL 600.0162
ASP 610.0329
SER 620.0277
VAL 630.0212
LYS 640.0285
GLY 650.0289
ARG 660.0213
PHE 670.0143
THR 680.0137
ILE 690.0097
SER 700.0077
ARG 710.0074
ASP 720.0074
ASN 730.0075
ALA 740.0082
LYS 750.0095
ASN 760.0085
ASN 770.0079
LEU 780.0076
TYR 790.0091
LEU 800.0096
GLN 810.0117
MET 820.0133
SER 820.0142
SER 820.0111
LEU 820.0049
LYS 830.0085
SER 840.0141
GLU 850.0161
ASP 860.0102
THR 870.0108
ALA 880.0073
ILE 890.0059
TYR 900.0048
TYR 910.0036
CYS 920.0040
ALA 930.0051
ARG 940.0016
ASP 950.0013
GLY 960.0012
PRO 970.0054
THR 980.0038
ASP 990.0038
SER 1000.0042
SER 1000.0049
GLY 1000.0064
TYR 1000.0061
GLY 1000.0042
GLY 1000.0026
PHE 1000.0007
GLY 1010.0009
TYR 1020.0031
TRP 1030.0041
GLY 1040.0046
GLN 1050.0048
GLY 1060.0044
THR 1070.0041
LEU 1080.0044
VAL 1090.0053
THR 1100.0095
VAL 1110.0106
SER 1120.0197
GLU 1130.0285
ALA 1140.0207
LYS 1150.0157
THR 1160.0099
THR 1170.0084
PRO 1180.0066
PRO 1190.0059
SER 1200.0082
VAL 1210.0100
TYR 1220.0095
PRO 1230.0101
LEU 1240.0076
ALA 1250.0092
PRO 1260.0111
GLY 1270.0147
SER 1280.0065
ALA 1290.0184
ALA 1300.0278
GLN 1330.0602
THR 1340.0455
ASN 1350.0412
SER 1360.0244
MET 1370.0139
VAL 1380.0090
THR 1390.0086
LEU 1400.0080
GLY 1410.0079
CYS 1420.0070
LEU 1430.0067
VAL 1440.0057
LYS 1450.0054
GLY 1460.0051
TYR 1470.0034
PHE 1480.0047
PRO 1490.0030
GLU 1500.0028
PRO 1510.0068
VAL 1520.0061
THR 1530.0067
VAL 1540.0104
THR 1560.0152
TRP 1570.0138
ASN 1620.0247
SER 1630.0289
GLY 1640.0280
SER 1650.0301
LEU 1660.0185
SER 1670.0130
SER 1680.0074
GLY 1690.0098
VAL 1710.0084
HIS 1720.0103
THR 1730.0090
PHE 1740.0113
PRO 1750.0116
ALA 1760.0106
VAL 1770.0044
LEU 1780.0049
GLN 1790.0060
SER 1800.0058
ASP 1830.0076
LEU 1840.0051
TYR 1850.0027
THR 1860.0031
LEU 1870.0042
SER 1880.0055
SER 1890.0053
SER 1900.0070
VAL 1910.0079
THR 1920.0077
VAL 1930.0051
PRO 1940.0118
SER 1950.0219
SER 1960.0232
PRO 1980.0123
ARG 1990.0071
PRO 2000.0144
SER 2020.0226
GLU 2030.0272
THR 2040.0212
VAL 2050.0146
THR 2060.0137
CYS 2080.0114
ASN 2090.0131
VAL 2100.0126
ALA 2110.0086
HIS 2120.0081
PRO 2130.0122
ALA 2140.0106
SER 2150.0127
SER 2160.0156
THR 2170.0139
LYS 2180.0127
VAL 2190.0129
ASP 2200.0142
LYS 2210.0114
LYS 2220.0136
ILE 2230.0130
VAL 2260.0173
PRO 2270.0173
ARG 2280.0164
ASP 2320.0220
CYS 2330.0477
SER 20.0296
VAL 30.0292
LEU 40.0220
SER 50.0177
GLN 60.0161
SER 70.0207
PRO 80.0109
ALA 90.0107
ILE 100.0040
LEU 110.0107
SER 120.0092
ALA 130.0057
SER 140.0120
PRO 150.0154
GLY 160.0210
GLU 170.0164
LYS 180.0181
VAL 190.0151
THR 200.0184
MET 210.0180
THR 220.0178
CYS 230.0191
ARG 240.0223
ALA 250.0253
ARG 260.0505
SER 270.0446
SER 290.0337
VAL 300.0253
SER 310.0225
TYR 320.0093
MET 330.0068
HIS 340.0066
TRP 350.0098
TYR 360.0100
GLN 370.0114
GLN 380.0093
LYS 390.0090
SER 400.0096
GLY 410.0087
SER 420.0088
SER 430.0082
PRO 440.0098
LYS 450.0094
PRO 460.0100
TRP 470.0120
ILE 480.0096
HIS 490.0080
ALA 500.0079
THR 510.0076
SER 520.0084
ASN 530.0111
LEU 540.0146
ALA 550.0166
SER 560.0382
GLY 570.0356
VAL 580.0221
PRO 590.0182
ALA 600.0220
ARG 610.0200
PHE 620.0152
SER 630.0152
GLY 640.0148
SER 650.0084
GLY 660.0102
SER 670.0148
GLY 680.0216
THR 690.0243
SER 700.0181
TYR 710.0134
SER 720.0145
LEU 730.0149
THR 740.0218
ILE 750.0183
SER 760.0218
ARG 770.0233
VAL 780.0109
GLU 790.0093
ALA 800.0074
GLU 810.0020
ASP 820.0059
ALA 830.0070
ALA 840.0076
THR 850.0089
TYR 860.0097
TYR 870.0090
CYS 880.0085
GLN 890.0063
GLN 900.0062
TRP 910.0080
SER 920.0149
SER 930.0163
HIS 940.0122
PRO 950.0131
PRO 960.0077
THR 970.0088
PHE 980.0077
GLY 990.0108
SER 1000.0115
GLY 1010.0126
THR 1020.0095
LYS 1030.0055
LEU 1040.0121
GLU 1050.0134
ILE 1060.0112
LYS 1070.0266
ARG 1080.0273
ALA 1090.0271
ASP 1100.0345
ALA 1110.0339
ALA 1120.0287
PRO 1130.0233
THR 1140.0191
VAL 1150.0146
SER 1160.0111
ILE 1170.0100
PHE 1180.0084
PRO 1190.0087
PRO 1200.0075
SER 1210.0082
SER 1220.0095
GLU 1230.0110
GLN 1240.0094
LEU 1250.0112
THR 1260.0154
SER 1270.0161
GLY 1280.0148
GLY 1290.0106
ALA 1300.0074
SER 1310.0054
VAL 1320.0064
VAL 1330.0081
CYS 1340.0089
PHE 1350.0129
LEU 1360.0178
ASN 1370.0237
ASN 1380.0301
PHE 1390.0316
TYR 1400.0339
PRO 1410.0330
LYS 1420.0335
ASP 1430.0270
ILE 1440.0185
ASN 1450.0157
VAL 1460.0065
LYS 1470.0047
TRP 1480.0022
LYS 1490.0036
ILE 1500.0026
ASP 1510.0059
GLY 1520.0109
SER 1530.0113
GLU 1540.0095
ARG 1550.0080
GLN 1560.0063
ASN 1570.0096
GLY 1580.0086
VAL 1590.0089
LEU 1600.0111
ASN 1610.0138
SER 1620.0175
TRP 1630.0231
THR 1640.0259
ASP 1650.0265
GLN 1660.0273
ASP 1670.0317
SER 1680.0246
LYS 1690.0280
ASP 1700.0311
SER 1710.0296
THR 1720.0328
TYR 1730.0307
SER 1740.0264
MET 1750.0224
SER 1760.0143
SER 1770.0112
THR 1780.0084
LEU 1790.0060
THR 1800.0052
LEU 1810.0053
THR 1820.0121
LYS 1830.0122
ASP 1840.0143
GLU 1850.0119
TYR 1860.0091
GLU 1870.0104
ARG 1880.0112
HIS 1890.0090
ASN 1900.0068
SER 1910.0060
TYR 1920.0054
THR 1930.0047
CYS 1940.0033
GLU 1950.0034
ALA 1960.0031
THR 1970.0075
HIS 1980.0071
LYS 1990.0058
THR 2000.0249
SER 2010.0482
THR 2020.0807
SER 2030.0470
PRO 2040.0258
ILE 2050.0246
VAL 2060.0136
LYS 2070.0113
SER 2080.0085
PHE 2090.0061
ASN 2100.0061
ARG 2110.0057
ASN 2120.0110
GLU 2130.0113
CYS 2140.0115

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.