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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 34  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0826
ILE 4210.0318
PHE 4220.0497
ILE 4230.0223
SER 4240.0145
ASN 4250.0116
ASP 4260.0157
LYS 4270.0146
GLU 4280.0172
SER 4290.0185
ILE 4300.0219
LYS 4310.0160
CYS 4320.0100
PRO 4330.0048
CYS 4340.0050
GLU 4350.0057
PRO 4360.0107
GLU 4370.0109
ARG 4380.0123
ILE 4390.0213
SER 4400.0160
GLU 4410.0166
SER 4420.0173
THR 4430.0319
CYS 4440.0124
ASN 4450.0099
PHE 4460.0132
TYR 4470.0176
VAL 4480.0189
CYS 4490.0127
ASN 4500.0063
CYS 4510.0055
VAL 4520.0055
GLU 4530.0057
LYS 4540.0032
GLU 10.0261
VAL 20.0120
GLN 30.0107
LEU 40.0087
VAL 50.0116
GLU 60.0128
SER 70.0177
GLY 80.0171
GLY 90.0161
GLY 100.0140
LEU 110.0083
VAL 120.0058
LYS 130.0026
PRO 140.0043
GLY 150.0014
GLY 160.0037
SER 170.0071
LEU 180.0113
LYS 190.0137
LEU 200.0138
SER 210.0153
CYS 220.0124
ALA 230.0107
ALA 240.0066
SER 250.0042
GLY 260.0111
PHE 270.0108
ILE 280.0092
PHE 290.0040
SER 300.0074
ASP 310.0075
TYR 320.0053
TYR 330.0043
MET 340.0024
TYR 350.0037
TRP 360.0062
VAL 370.0039
ARG 380.0055
GLN 390.0081
THR 400.0149
PRO 410.0282
GLU 420.0297
LYS 430.0155
ARG 440.0106
LEU 450.0026
GLU 460.0032
TRP 470.0012
VAL 480.0012
ALA 490.0035
THR 500.0025
ILE 510.0017
SER 520.0034
ASP 520.0066
GLY 530.0118
ASN 540.0136
SER 550.0082
TYR 560.0068
THR 570.0038
TYR 580.0025
TYR 590.0020
VAL 600.0009
ASP 610.0044
SER 620.0047
VAL 630.0017
LYS 640.0038
GLY 650.0065
ARG 660.0037
PHE 670.0039
THR 680.0060
ILE 690.0067
SER 700.0091
ARG 710.0079
ASP 720.0107
ASN 730.0079
ALA 740.0110
LYS 750.0125
ASN 760.0066
ASN 770.0101
LEU 780.0095
TYR 790.0119
LEU 800.0095
GLN 810.0098
MET 820.0068
SER 820.0049
SER 820.0034
LEU 820.0015
LYS 830.0058
SER 840.0096
GLU 850.0106
ASP 860.0077
THR 870.0113
ALA 880.0109
ILE 890.0120
TYR 900.0097
TYR 910.0054
CYS 920.0058
ALA 930.0057
ARG 940.0028
ASP 950.0044
GLY 960.0070
PRO 970.0087
THR 980.0058
ASP 990.0067
SER 1000.0071
SER 1000.0061
GLY 1000.0055
TYR 1000.0061
GLY 1000.0056
GLY 1000.0059
PHE 1000.0055
GLY 1010.0060
TYR 1020.0057
TRP 1030.0056
GLY 1040.0081
GLN 1050.0089
GLY 1060.0135
THR 1070.0144
LEU 1080.0149
VAL 1090.0141
THR 1100.0122
VAL 1110.0081
SER 1120.0094
GLU 1130.0120
ALA 1140.0125
LYS 1150.0143
THR 1160.0078
THR 1170.0085
PRO 1180.0022
PRO 1190.0027
SER 1200.0041
VAL 1210.0074
TYR 1220.0101
PRO 1230.0116
LEU 1240.0125
ALA 1250.0131
PRO 1260.0140
GLY 1270.0122
SER 1280.0076
ALA 1290.0283
ALA 1300.0267
GLN 1330.0826
THR 1340.0515
ASN 1350.0611
SER 1360.0185
MET 1370.0211
VAL 1380.0105
THR 1390.0126
LEU 1400.0121
GLY 1410.0112
CYS 1420.0093
LEU 1430.0099
VAL 1440.0077
LYS 1450.0056
GLY 1460.0029
TYR 1470.0021
PHE 1480.0041
PRO 1490.0045
GLU 1500.0097
PRO 1510.0089
VAL 1520.0067
THR 1530.0078
VAL 1540.0110
THR 1560.0248
TRP 1570.0244
ASN 1620.0441
SER 1630.0567
GLY 1640.0541
SER 1650.0556
LEU 1660.0355
SER 1670.0439
SER 1680.0390
GLY 1690.0241
VAL 1710.0110
HIS 1720.0074
THR 1730.0078
PHE 1740.0124
PRO 1750.0159
ALA 1760.0162
VAL 1770.0216
LEU 1780.0235
GLN 1790.0276
SER 1800.0424
ASP 1830.0247
LEU 1840.0151
TYR 1850.0108
THR 1860.0071
LEU 1870.0093
SER 1880.0108
SER 1890.0076
SER 1900.0088
VAL 1910.0066
THR 1920.0163
VAL 1930.0192
PRO 1940.0233
SER 1950.0201
SER 1960.0346
PRO 1980.0167
ARG 1990.0194
PRO 2000.0255
SER 2020.0307
GLU 2030.0187
THR 2040.0307
VAL 2050.0219
THR 2060.0267
CYS 2080.0181
ASN 2090.0213
VAL 2100.0122
ALA 2110.0076
HIS 2120.0034
PRO 2130.0070
ALA 2140.0094
SER 2150.0071
SER 2160.0077
THR 2170.0035
LYS 2180.0122
VAL 2190.0178
ASP 2200.0221
LYS 2210.0184
LYS 2220.0207
ILE 2230.0185
VAL 2260.0160
PRO 2270.0165
ARG 2280.0138
ASP 2320.0134
CYS 2330.0142
SER 20.0152
VAL 30.0153
LEU 40.0119
SER 50.0149
GLN 60.0135
SER 70.0168
PRO 80.0169
ALA 90.0163
ILE 100.0114
LEU 110.0096
SER 120.0053
ALA 130.0028
SER 140.0052
PRO 150.0109
GLY 160.0158
GLU 170.0127
LYS 180.0136
VAL 190.0121
THR 200.0134
MET 210.0136
THR 220.0154
CYS 230.0126
ARG 240.0139
ALA 250.0138
ARG 260.0263
SER 270.0168
SER 290.0121
VAL 300.0116
SER 310.0126
TYR 320.0105
MET 330.0094
HIS 340.0092
TRP 350.0081
TYR 360.0081
GLN 370.0079
GLN 380.0068
LYS 390.0082
SER 400.0112
GLY 410.0187
SER 420.0151
SER 430.0093
PRO 440.0061
LYS 450.0094
PRO 460.0107
TRP 470.0099
ILE 480.0101
HIS 490.0108
ALA 500.0109
THR 510.0110
SER 520.0122
ASN 530.0129
LEU 540.0127
ALA 550.0127
SER 560.0173
GLY 570.0152
VAL 580.0121
PRO 590.0059
ALA 600.0044
ARG 610.0045
PHE 620.0078
SER 630.0086
GLY 640.0099
SER 650.0110
GLY 660.0101
SER 670.0083
GLY 680.0085
THR 690.0113
SER 700.0122
TYR 710.0104
SER 720.0115
LEU 730.0109
THR 740.0128
ILE 750.0078
SER 760.0110
ARG 770.0120
VAL 780.0054
GLU 790.0085
ALA 800.0062
GLU 810.0070
ASP 820.0046
ALA 830.0038
ALA 840.0052
THR 850.0065
TYR 860.0067
TYR 870.0071
CYS 880.0084
GLN 890.0080
GLN 900.0080
TRP 910.0078
SER 920.0090
SER 930.0082
HIS 940.0064
PRO 950.0080
PRO 960.0081
THR 970.0085
PHE 980.0062
GLY 990.0056
SER 1000.0056
GLY 1010.0113
THR 1020.0091
LYS 1030.0074
LEU 1040.0053
GLU 1050.0058
ILE 1060.0055
LYS 1070.0108
ARG 1080.0154
ALA 1090.0218
ASP 1100.0227
ALA 1110.0161
ALA 1120.0126
PRO 1130.0102
THR 1140.0083
VAL 1150.0099
SER 1160.0126
ILE 1170.0133
PHE 1180.0145
PRO 1190.0150
PRO 1200.0131
SER 1210.0105
SER 1220.0089
GLU 1230.0108
GLN 1240.0119
LEU 1250.0211
THR 1260.0263
SER 1270.0244
GLY 1280.0218
GLY 1290.0165
ALA 1300.0133
SER 1310.0122
VAL 1320.0118
VAL 1330.0144
CYS 1340.0141
PHE 1350.0118
LEU 1360.0106
ASN 1370.0053
ASN 1380.0075
PHE 1390.0123
TYR 1400.0179
PRO 1410.0204
LYS 1420.0188
ASP 1430.0201
ILE 1440.0157
ASN 1450.0179
VAL 1460.0133
LYS 1470.0107
TRP 1480.0095
LYS 1490.0080
ILE 1500.0128
ASP 1510.0185
GLY 1520.0223
SER 1530.0150
GLU 1540.0203
ARG 1550.0116
GLN 1560.0105
ASN 1570.0131
GLY 1580.0056
VAL 1590.0113
LEU 1600.0149
ASN 1610.0174
SER 1620.0146
TRP 1630.0097
THR 1640.0067
ASP 1650.0068
GLN 1660.0074
ASP 1670.0076
SER 1680.0068
LYS 1690.0098
ASP 1700.0114
SER 1710.0122
THR 1720.0119
TYR 1730.0091
SER 1740.0060
MET 1750.0095
SER 1760.0140
SER 1770.0142
THR 1780.0146
LEU 1790.0086
THR 1800.0071
LEU 1810.0067
THR 1820.0146
LYS 1830.0218
ASP 1840.0268
GLU 1850.0251
TYR 1860.0207
GLU 1870.0310
ARG 1880.0343
HIS 1890.0268
ASN 1900.0237
SER 1910.0146
TYR 1920.0094
THR 1930.0068
CYS 1940.0131
GLU 1950.0135
ALA 1960.0135
THR 1970.0200
HIS 1980.0167
LYS 1990.0183
THR 2000.0133
SER 2010.0193
THR 2020.0320
SER 2030.0287
PRO 2040.0226
ILE 2050.0188
VAL 2060.0143
LYS 2070.0131
SER 2080.0115
PHE 2090.0118
ASN 2100.0172
ARG 2110.0244
ASN 2120.0179
GLU 2130.0172
CYS 2140.0175

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.