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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 36  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1043
ILE 4210.0636
PHE 4220.0575
ILE 4230.0216
SER 4240.0111
ASN 4250.0225
ASP 4260.0298
LYS 4270.0211
GLU 4280.0272
SER 4290.0342
ILE 4300.0299
LYS 4310.0216
CYS 4320.0114
PRO 4330.0056
CYS 4340.0055
GLU 4350.0056
PRO 4360.0101
GLU 4370.0154
ARG 4380.0178
ILE 4390.0461
SER 4400.0454
GLU 4410.0881
SER 4420.0384
THR 4430.1043
CYS 4440.0961
ASN 4450.0208
PHE 4460.0231
TYR 4470.0155
VAL 4480.0126
CYS 4490.0080
ASN 4500.0048
CYS 4510.0034
VAL 4520.0052
GLU 4530.0079
LYS 4540.0103
GLU 10.0212
VAL 20.0146
GLN 30.0117
LEU 40.0078
VAL 50.0079
GLU 60.0062
SER 70.0069
GLY 80.0066
GLY 90.0063
GLY 100.0081
LEU 110.0075
VAL 120.0107
LYS 130.0177
PRO 140.0160
GLY 150.0144
GLY 160.0094
SER 170.0069
LEU 180.0063
LYS 190.0034
LEU 200.0036
SER 210.0042
CYS 220.0052
ALA 230.0055
ALA 240.0055
SER 250.0058
GLY 260.0090
PHE 270.0086
ILE 280.0061
PHE 290.0043
SER 300.0064
ASP 310.0057
TYR 320.0047
TYR 330.0044
MET 340.0053
TYR 350.0049
TRP 360.0042
VAL 370.0040
ARG 380.0010
GLN 390.0032
THR 400.0081
PRO 410.0188
GLU 420.0229
LYS 430.0119
ARG 440.0089
LEU 450.0031
GLU 460.0028
TRP 470.0046
VAL 480.0045
ALA 490.0057
THR 500.0053
ILE 510.0047
SER 520.0054
ASP 520.0057
GLY 530.0136
ASN 540.0168
SER 550.0118
TYR 560.0077
THR 570.0051
TYR 580.0055
TYR 590.0053
VAL 600.0053
ASP 610.0135
SER 620.0116
VAL 630.0083
LYS 640.0117
GLY 650.0112
ARG 660.0074
PHE 670.0054
THR 680.0058
ILE 690.0051
SER 700.0040
ARG 710.0045
ASP 720.0061
ASN 730.0070
ALA 740.0099
LYS 750.0075
ASN 760.0026
ASN 770.0032
LEU 780.0028
TYR 790.0034
LEU 800.0033
GLN 810.0032
MET 820.0029
SER 820.0024
SER 820.0049
LEU 820.0062
LYS 830.0100
SER 840.0125
GLU 850.0112
ASP 860.0063
THR 870.0068
ALA 880.0043
ILE 890.0038
TYR 900.0028
TYR 910.0032
CYS 920.0045
ALA 930.0061
ARG 940.0060
ASP 950.0065
GLY 960.0068
PRO 970.0066
THR 980.0053
ASP 990.0066
SER 1000.0065
SER 1000.0065
GLY 1000.0065
TYR 1000.0064
GLY 1000.0062
GLY 1000.0061
PHE 1000.0060
GLY 1010.0061
TYR 1020.0059
TRP 1030.0066
GLY 1040.0065
GLN 1050.0069
GLY 1060.0053
THR 1070.0053
LEU 1080.0051
VAL 1090.0038
THR 1100.0051
VAL 1110.0085
SER 1120.0130
GLU 1130.0191
ALA 1140.0086
LYS 1150.0038
THR 1160.0047
THR 1170.0062
PRO 1180.0087
PRO 1190.0064
SER 1200.0050
VAL 1210.0031
TYR 1220.0026
PRO 1230.0063
LEU 1240.0037
ALA 1250.0026
PRO 1260.0024
GLY 1270.0068
SER 1280.0174
ALA 1290.0272
ALA 1300.0197
GLN 1330.0273
THR 1340.0199
ASN 1350.0322
SER 1360.0251
MET 1370.0209
VAL 1380.0135
THR 1390.0074
LEU 1400.0063
GLY 1410.0060
CYS 1420.0043
LEU 1430.0039
VAL 1440.0055
LYS 1450.0031
GLY 1460.0034
TYR 1470.0072
PHE 1480.0077
PRO 1490.0091
GLU 1500.0130
PRO 1510.0169
VAL 1520.0111
THR 1530.0079
VAL 1540.0051
THR 1560.0178
TRP 1570.0191
ASN 1620.0311
SER 1630.0407
GLY 1640.0414
SER 1650.0413
LEU 1660.0302
SER 1670.0386
SER 1680.0383
GLY 1690.0249
VAL 1710.0100
HIS 1720.0063
THR 1730.0057
PHE 1740.0058
PRO 1750.0083
ALA 1760.0110
VAL 1770.0108
LEU 1780.0100
GLN 1790.0076
SER 1800.0070
ASP 1830.0063
LEU 1840.0063
TYR 1850.0097
THR 1860.0067
LEU 1870.0065
SER 1880.0052
SER 1890.0060
SER 1900.0065
VAL 1910.0076
THR 1920.0120
VAL 1930.0120
PRO 1940.0181
SER 1950.0149
SER 1960.0182
PRO 1980.0148
ARG 1990.0127
PRO 2000.0116
SER 2020.0170
GLU 2030.0125
THR 2040.0150
VAL 2050.0135
THR 2060.0168
CYS 2080.0139
ASN 2090.0145
VAL 2100.0089
ALA 2110.0084
HIS 2120.0126
PRO 2130.0221
ALA 2140.0229
SER 2150.0203
SER 2160.0239
THR 2170.0166
LYS 2180.0107
VAL 2190.0134
ASP 2200.0148
LYS 2210.0123
LYS 2220.0123
ILE 2230.0081
VAL 2260.0030
PRO 2270.0031
ARG 2280.0048
ASP 2320.0147
CYS 2330.0079
SER 20.0153
VAL 30.0131
LEU 40.0076
SER 50.0050
GLN 60.0037
SER 70.0065
PRO 80.0082
ALA 90.0083
ILE 100.0103
LEU 110.0080
SER 120.0075
ALA 130.0074
SER 140.0078
PRO 150.0090
GLY 160.0084
GLU 170.0074
LYS 180.0068
VAL 190.0053
THR 200.0086
MET 210.0067
THR 220.0065
CYS 230.0074
ARG 240.0114
ALA 250.0136
ARG 260.0274
SER 270.0213
SER 290.0157
VAL 300.0109
SER 310.0082
TYR 320.0054
MET 330.0046
HIS 340.0043
TRP 350.0025
TYR 360.0025
GLN 370.0028
GLN 380.0042
LYS 390.0073
SER 400.0110
GLY 410.0180
SER 420.0126
SER 430.0058
PRO 440.0033
LYS 450.0054
PRO 460.0057
TRP 470.0031
ILE 480.0030
HIS 490.0049
ALA 500.0054
THR 510.0040
SER 520.0027
ASN 530.0036
LEU 540.0025
ALA 550.0041
SER 560.0061
GLY 570.0059
VAL 580.0037
PRO 590.0060
ALA 600.0065
ARG 610.0072
PHE 620.0049
SER 630.0048
GLY 640.0045
SER 650.0083
GLY 660.0099
SER 670.0115
GLY 680.0158
THR 690.0161
SER 700.0138
TYR 710.0076
SER 720.0064
LEU 730.0053
THR 740.0065
ILE 750.0072
SER 760.0089
ARG 770.0085
VAL 780.0064
GLU 790.0084
ALA 800.0043
GLU 810.0046
ASP 820.0045
ALA 830.0041
ALA 840.0043
THR 850.0050
TYR 860.0024
TYR 870.0013
CYS 880.0027
GLN 890.0063
GLN 900.0062
TRP 910.0068
SER 920.0071
SER 930.0078
HIS 940.0080
PRO 950.0095
PRO 960.0085
THR 970.0090
PHE 980.0052
GLY 990.0043
SER 1000.0031
GLY 1010.0043
THR 1020.0054
LYS 1030.0069
LEU 1040.0062
GLU 1050.0055
ILE 1060.0055
LYS 1070.0120
ARG 1080.0135
ALA 1090.0161
ASP 1100.0147
ALA 1110.0134
ALA 1120.0110
PRO 1130.0076
THR 1140.0084
VAL 1150.0078
SER 1160.0060
ILE 1170.0060
PHE 1180.0058
PRO 1190.0072
PRO 1200.0088
SER 1210.0122
SER 1220.0234
GLU 1230.0193
GLN 1240.0167
LEU 1250.0251
THR 1260.0381
SER 1270.0404
GLY 1280.0310
GLY 1290.0235
ALA 1300.0143
SER 1310.0085
VAL 1320.0068
VAL 1330.0065
CYS 1340.0062
PHE 1350.0059
LEU 1360.0060
ASN 1370.0063
ASN 1380.0072
PHE 1390.0059
TYR 1400.0094
PRO 1410.0091
LYS 1420.0060
ASP 1430.0058
ILE 1440.0055
ASN 1450.0081
VAL 1460.0092
LYS 1470.0084
TRP 1480.0073
LYS 1490.0073
ILE 1500.0074
ASP 1510.0062
GLY 1520.0054
SER 1530.0035
GLU 1540.0069
ARG 1550.0079
GLN 1560.0091
ASN 1570.0102
GLY 1580.0062
VAL 1590.0055
LEU 1600.0049
ASN 1610.0060
SER 1620.0059
TRP 1630.0054
THR 1640.0016
ASP 1650.0037
GLN 1660.0012
ASP 1670.0047
SER 1680.0062
LYS 1690.0107
ASP 1700.0112
SER 1710.0071
THR 1720.0069
TYR 1730.0046
SER 1740.0042
MET 1750.0036
SER 1760.0063
SER 1770.0053
THR 1780.0056
LEU 1790.0074
THR 1800.0116
LEU 1810.0136
THR 1820.0266
LYS 1830.0200
ASP 1840.0190
GLU 1850.0192
TYR 1860.0135
GLU 1870.0098
ARG 1880.0158
HIS 1890.0124
ASN 1900.0071
SER 1910.0032
TYR 1920.0057
THR 1930.0065
CYS 1940.0087
GLU 1950.0094
ALA 1960.0098
THR 1970.0089
HIS 1980.0073
LYS 1990.0098
THR 2000.0121
SER 2010.0121
THR 2020.0110
SER 2030.0145
PRO 2040.0134
ILE 2050.0119
VAL 2060.0090
LYS 2070.0071
SER 2080.0066
PHE 2090.0044
ASN 2100.0018
ARG 2110.0029
ASN 2120.0101
GLU 2130.0110
CYS 2140.0146

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.