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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 37  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0703
ILE 4210.0578
PHE 4220.0703
ILE 4230.0245
SER 4240.0178
ASN 4250.0212
ASP 4260.0189
LYS 4270.0081
GLU 4280.0082
SER 4290.0083
ILE 4300.0159
LYS 4310.0104
CYS 4320.0088
PRO 4330.0062
CYS 4340.0065
GLU 4350.0059
PRO 4360.0086
GLU 4370.0060
ARG 4380.0087
ILE 4390.0041
SER 4400.0082
GLU 4410.0306
SER 4420.0479
THR 4430.0426
CYS 4440.0482
ASN 4450.0221
PHE 4460.0227
TYR 4470.0185
VAL 4480.0217
CYS 4490.0125
ASN 4500.0034
CYS 4510.0058
VAL 4520.0081
GLU 4530.0081
LYS 4540.0117
GLU 10.0637
VAL 20.0279
GLN 30.0224
LEU 40.0139
VAL 50.0167
GLU 60.0190
SER 70.0202
GLY 80.0174
GLY 90.0162
GLY 100.0119
LEU 110.0074
VAL 120.0158
LYS 130.0352
PRO 140.0315
GLY 150.0292
GLY 160.0209
SER 170.0156
LEU 180.0128
LYS 190.0152
LEU 200.0164
SER 210.0189
CYS 220.0180
ALA 230.0132
ALA 240.0064
SER 250.0169
GLY 260.0310
PHE 270.0277
ILE 280.0220
PHE 290.0127
SER 300.0173
ASP 310.0117
TYR 320.0058
TYR 330.0023
MET 340.0082
TYR 350.0100
TRP 360.0129
VAL 370.0106
ARG 380.0107
GLN 390.0132
THR 400.0215
PRO 410.0456
GLU 420.0486
LYS 430.0258
ARG 440.0166
LEU 450.0046
GLU 460.0065
TRP 470.0083
VAL 480.0076
ALA 490.0110
THR 500.0094
ILE 510.0074
SER 520.0050
ASP 520.0016
GLY 530.0057
ASN 540.0090
SER 550.0078
TYR 560.0094
THR 570.0107
TYR 580.0107
TYR 590.0122
VAL 600.0141
ASP 610.0231
SER 620.0157
VAL 630.0137
LYS 640.0202
GLY 650.0222
ARG 660.0160
PHE 670.0125
THR 680.0124
ILE 690.0119
SER 700.0162
ARG 710.0141
ASP 720.0185
ASN 730.0218
ALA 740.0304
LYS 750.0232
ASN 760.0129
ASN 770.0144
LEU 780.0148
TYR 790.0170
LEU 800.0138
GLN 810.0129
MET 820.0131
SER 820.0145
SER 820.0148
LEU 820.0105
LYS 830.0147
SER 840.0214
GLU 850.0174
ASP 860.0111
THR 870.0132
ALA 880.0148
ILE 890.0174
TYR 900.0154
TYR 910.0112
CYS 920.0124
ALA 930.0124
ARG 940.0088
ASP 950.0098
GLY 960.0136
PRO 970.0126
THR 980.0102
ASP 990.0109
SER 1000.0107
SER 1000.0081
GLY 1000.0062
TYR 1000.0080
GLY 1000.0090
GLY 1000.0105
PHE 1000.0110
GLY 1010.0110
TYR 1020.0113
TRP 1030.0118
GLY 1040.0144
GLN 1050.0151
GLY 1060.0196
THR 1070.0172
LEU 1080.0157
VAL 1090.0119
THR 1100.0101
VAL 1110.0138
SER 1120.0347
GLU 1130.0479
ALA 1140.0292
LYS 1150.0126
THR 1160.0039
THR 1170.0062
PRO 1180.0103
PRO 1190.0092
SER 1200.0089
VAL 1210.0047
TYR 1220.0043
PRO 1230.0033
LEU 1240.0082
ALA 1250.0080
PRO 1260.0080
GLY 1270.0093
SER 1280.0089
ALA 1290.0070
ALA 1300.0080
GLN 1330.0351
THR 1340.0228
ASN 1350.0314
SER 1360.0195
MET 1370.0172
VAL 1380.0114
THR 1390.0083
LEU 1400.0074
GLY 1410.0072
CYS 1420.0034
LEU 1430.0042
VAL 1440.0044
LYS 1450.0069
GLY 1460.0098
TYR 1470.0102
PHE 1480.0078
PRO 1490.0057
GLU 1500.0040
PRO 1510.0034
VAL 1520.0045
THR 1530.0067
VAL 1540.0070
THR 1560.0133
TRP 1570.0118
ASN 1620.0191
SER 1630.0263
GLY 1640.0275
SER 1650.0260
LEU 1660.0183
SER 1670.0246
SER 1680.0234
GLY 1690.0160
VAL 1710.0058
HIS 1720.0045
THR 1730.0047
PHE 1740.0045
PRO 1750.0049
ALA 1760.0044
VAL 1770.0111
LEU 1780.0215
GLN 1790.0326
SER 1800.0666
ASP 1830.0304
LEU 1840.0214
TYR 1850.0127
THR 1860.0052
LEU 1870.0030
SER 1880.0058
SER 1890.0060
SER 1900.0059
VAL 1910.0049
THR 1920.0110
VAL 1930.0120
PRO 1940.0152
SER 1950.0113
SER 1960.0164
PRO 1980.0136
ARG 1990.0119
PRO 2000.0102
SER 2020.0135
GLU 2030.0091
THR 2040.0093
VAL 2050.0086
THR 2060.0102
CYS 2080.0090
ASN 2090.0107
VAL 2100.0090
ALA 2110.0099
HIS 2120.0077
PRO 2130.0091
ALA 2140.0078
SER 2150.0103
SER 2160.0156
THR 2170.0123
LYS 2180.0100
VAL 2190.0111
ASP 2200.0109
LYS 2210.0086
LYS 2220.0082
ILE 2230.0064
VAL 2260.0052
PRO 2270.0067
ARG 2280.0070
ASP 2320.0106
CYS 2330.0192
SER 20.0273
VAL 30.0274
LEU 40.0174
SER 50.0123
GLN 60.0051
SER 70.0012
PRO 80.0041
ALA 90.0046
ILE 100.0057
LEU 110.0054
SER 120.0048
ALA 130.0039
SER 140.0039
PRO 150.0034
GLY 160.0034
GLU 170.0050
LYS 180.0050
VAL 190.0048
THR 200.0049
MET 210.0016
THR 220.0029
CYS 230.0073
ARG 240.0169
ALA 250.0229
ARG 260.0409
SER 270.0371
SER 290.0249
VAL 300.0163
SER 310.0113
TYR 320.0057
MET 330.0068
HIS 340.0079
TRP 350.0061
TYR 360.0062
GLN 370.0053
GLN 380.0065
LYS 390.0115
SER 400.0190
GLY 410.0280
SER 420.0210
SER 430.0124
PRO 440.0065
LYS 450.0085
PRO 460.0105
TRP 470.0064
ILE 480.0071
HIS 490.0088
ALA 500.0062
THR 510.0054
SER 520.0034
ASN 530.0068
LEU 540.0063
ALA 550.0074
SER 560.0076
GLY 570.0073
VAL 580.0060
PRO 590.0036
ALA 600.0031
ARG 610.0026
PHE 620.0032
SER 630.0033
GLY 640.0032
SER 650.0098
GLY 660.0135
SER 670.0187
GLY 680.0266
THR 690.0257
SER 700.0195
TYR 710.0084
SER 720.0046
LEU 730.0023
THR 740.0039
ILE 750.0036
SER 760.0046
ARG 770.0038
VAL 780.0028
GLU 790.0019
ALA 800.0007
GLU 810.0014
ASP 820.0019
ALA 830.0040
ALA 840.0043
THR 850.0045
TYR 860.0038
TYR 870.0039
CYS 880.0055
GLN 890.0110
GLN 900.0095
TRP 910.0090
SER 920.0080
SER 930.0093
HIS 940.0093
PRO 950.0123
PRO 960.0124
THR 970.0143
PHE 980.0099
GLY 990.0075
SER 1000.0054
GLY 1010.0028
THR 1020.0031
LYS 1030.0044
LEU 1040.0049
GLU 1050.0037
ILE 1060.0021
LYS 1070.0060
ARG 1080.0079
ALA 1090.0099
ASP 1100.0134
ALA 1110.0110
ALA 1120.0092
PRO 1130.0076
THR 1140.0071
VAL 1150.0068
SER 1160.0063
ILE 1170.0072
PHE 1180.0085
PRO 1190.0084
PRO 1200.0077
SER 1210.0073
SER 1220.0085
GLU 1230.0081
GLN 1240.0085
LEU 1250.0118
THR 1260.0172
SER 1270.0181
GLY 1280.0112
GLY 1290.0092
ALA 1300.0055
SER 1310.0065
VAL 1320.0067
VAL 1330.0075
CYS 1340.0070
PHE 1350.0061
LEU 1360.0054
ASN 1370.0045
ASN 1380.0070
PHE 1390.0087
TYR 1400.0116
PRO 1410.0121
LYS 1420.0120
ASP 1430.0142
ILE 1440.0100
ASN 1450.0098
VAL 1460.0092
LYS 1470.0084
TRP 1480.0076
LYS 1490.0057
ILE 1500.0014
ASP 1510.0035
GLY 1520.0046
SER 1530.0076
GLU 1540.0096
ARG 1550.0075
GLN 1560.0069
ASN 1570.0088
GLY 1580.0041
VAL 1590.0075
LEU 1600.0069
ASN 1610.0090
SER 1620.0074
TRP 1630.0062
THR 1640.0064
ASP 1650.0110
GLN 1660.0095
ASP 1670.0124
SER 1680.0124
LYS 1690.0158
ASP 1700.0131
SER 1710.0105
THR 1720.0100
TYR 1730.0078
SER 1740.0060
MET 1750.0062
SER 1760.0064
SER 1770.0065
THR 1780.0068
LEU 1790.0045
THR 1800.0036
LEU 1810.0023
THR 1820.0049
LYS 1830.0037
ASP 1840.0080
GLU 1850.0095
TYR 1860.0063
GLU 1870.0118
ARG 1880.0156
HIS 1890.0108
ASN 1900.0103
SER 1910.0050
TYR 1920.0041
THR 1930.0072
CYS 1940.0089
GLU 1950.0093
ALA 1960.0094
THR 1970.0094
HIS 1980.0099
LYS 1990.0131
THR 2000.0136
SER 2010.0110
THR 2020.0117
SER 2030.0119
PRO 2040.0111
ILE 2050.0112
VAL 2060.0098
LYS 2070.0090
SER 2080.0077
PHE 2090.0098
ASN 2100.0097
ARG 2110.0108
ASN 2120.0113
GLU 2130.0112
CYS 2140.0102

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.