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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 38  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0687
ILE 4210.0514
PHE 4220.0642
ILE 4230.0245
SER 4240.0097
ASN 4250.0132
ASP 4260.0125
LYS 4270.0144
GLU 4280.0198
SER 4290.0182
ILE 4300.0196
LYS 4310.0176
CYS 4320.0101
PRO 4330.0119
CYS 4340.0119
GLU 4350.0129
PRO 4360.0166
GLU 4370.0187
ARG 4380.0228
ILE 4390.0388
SER 4400.0240
GLU 4410.0372
SER 4420.0541
THR 4430.0609
CYS 4440.0275
ASN 4450.0151
PHE 4460.0158
TYR 4470.0165
VAL 4480.0078
CYS 4490.0092
ASN 4500.0109
CYS 4510.0133
VAL 4520.0164
GLU 4530.0181
LYS 4540.0257
GLU 10.0205
VAL 20.0102
GLN 30.0135
LEU 40.0084
VAL 50.0105
GLU 60.0115
SER 70.0083
GLY 80.0077
GLY 90.0084
GLY 100.0190
LEU 110.0172
VAL 120.0200
LYS 130.0303
PRO 140.0328
GLY 150.0342
GLY 160.0208
SER 170.0135
LEU 180.0094
LYS 190.0070
LEU 200.0071
SER 210.0098
CYS 220.0113
ALA 230.0132
ALA 240.0107
SER 250.0130
GLY 260.0141
PHE 270.0076
ILE 280.0061
PHE 290.0012
SER 300.0053
ASP 310.0096
TYR 320.0098
TYR 330.0104
MET 340.0047
TYR 350.0061
TRP 360.0074
VAL 370.0063
ARG 380.0061
GLN 390.0072
THR 400.0144
PRO 410.0276
GLU 420.0328
LYS 430.0164
ARG 440.0146
LEU 450.0080
GLU 460.0062
TRP 470.0049
VAL 480.0061
ALA 490.0072
THR 500.0066
ILE 510.0073
SER 520.0111
ASP 520.0143
GLY 530.0164
ASN 540.0177
SER 550.0119
TYR 560.0109
THR 570.0080
TYR 580.0030
TYR 590.0046
VAL 600.0051
ASP 610.0111
SER 620.0096
VAL 630.0065
LYS 640.0129
GLY 650.0115
ARG 660.0106
PHE 670.0070
THR 680.0083
ILE 690.0095
SER 700.0158
ARG 710.0123
ASP 720.0180
ASN 730.0163
ALA 740.0260
LYS 750.0279
ASN 760.0148
ASN 770.0138
LEU 780.0103
TYR 790.0107
LEU 800.0083
GLN 810.0089
MET 820.0067
SER 820.0108
SER 820.0185
LEU 820.0170
LYS 830.0230
SER 840.0237
GLU 850.0192
ASP 860.0125
THR 870.0074
ALA 880.0074
ILE 890.0086
TYR 900.0084
TYR 910.0080
CYS 920.0069
ALA 930.0046
ARG 940.0087
ASP 950.0095
GLY 960.0085
PRO 970.0116
THR 980.0124
ASP 990.0112
SER 1000.0090
SER 1000.0103
GLY 1000.0121
TYR 1000.0112
GLY 1000.0106
GLY 1000.0086
PHE 1000.0080
GLY 1010.0073
TYR 1020.0072
TRP 1030.0047
GLY 1040.0057
GLN 1050.0066
GLY 1060.0092
THR 1070.0083
LEU 1080.0090
VAL 1090.0094
THR 1100.0097
VAL 1110.0156
SER 1120.0233
GLU 1130.0317
ALA 1140.0215
LYS 1150.0271
THR 1160.0235
THR 1170.0244
PRO 1180.0153
PRO 1190.0162
SER 1200.0155
VAL 1210.0080
TYR 1220.0078
PRO 1230.0079
LEU 1240.0045
ALA 1250.0064
PRO 1260.0074
GLY 1270.0154
SER 1280.0271
ALA 1290.0346
ALA 1300.0114
GLN 1330.0102
THR 1340.0078
ASN 1350.0086
SER 1360.0068
MET 1370.0068
VAL 1380.0070
THR 1390.0044
LEU 1400.0035
GLY 1410.0039
CYS 1420.0046
LEU 1430.0071
VAL 1440.0083
LYS 1450.0151
GLY 1460.0154
TYR 1470.0161
PHE 1480.0183
PRO 1490.0172
GLU 1500.0184
PRO 1510.0250
VAL 1520.0207
THR 1530.0200
VAL 1540.0094
THR 1560.0088
TRP 1570.0088
ASN 1620.0148
SER 1630.0169
GLY 1640.0195
SER 1650.0221
LEU 1660.0151
SER 1670.0172
SER 1680.0124
GLY 1690.0089
VAL 1710.0049
HIS 1720.0048
THR 1730.0029
PHE 1740.0033
PRO 1750.0040
ALA 1760.0090
VAL 1770.0108
LEU 1780.0114
GLN 1790.0153
SER 1800.0178
ASP 1830.0156
LEU 1840.0175
TYR 1850.0178
THR 1860.0122
LEU 1870.0083
SER 1880.0046
SER 1890.0032
SER 1900.0043
VAL 1910.0040
THR 1920.0065
VAL 1930.0060
PRO 1940.0067
SER 1950.0068
SER 1960.0060
PRO 1980.0079
ARG 1990.0059
PRO 2000.0072
SER 2020.0115
GLU 2030.0138
THR 2040.0135
VAL 2050.0082
THR 2060.0077
CYS 2080.0084
ASN 2090.0078
VAL 2100.0121
ALA 2110.0196
HIS 2120.0212
PRO 2130.0249
ALA 2140.0242
SER 2150.0198
SER 2160.0207
THR 2170.0174
LYS 2180.0162
VAL 2190.0096
ASP 2200.0049
LYS 2210.0051
LYS 2220.0047
ILE 2230.0044
VAL 2260.0127
PRO 2270.0113
ARG 2280.0150
ASP 2320.0467
CYS 2330.0687
SER 20.0108
VAL 30.0150
LEU 40.0110
SER 50.0144
GLN 60.0106
SER 70.0123
PRO 80.0098
ALA 90.0102
ILE 100.0074
LEU 110.0038
SER 120.0049
ALA 130.0069
SER 140.0072
PRO 150.0040
GLY 160.0096
GLU 170.0104
LYS 180.0096
VAL 190.0064
THR 200.0052
MET 210.0070
THR 220.0090
CYS 230.0100
ARG 240.0158
ALA 250.0134
ARG 260.0262
SER 270.0135
SER 290.0109
VAL 300.0068
SER 310.0116
TYR 320.0076
MET 330.0049
HIS 340.0057
TRP 350.0036
TYR 360.0048
GLN 370.0049
GLN 380.0034
LYS 390.0037
SER 400.0063
GLY 410.0114
SER 420.0078
SER 430.0055
PRO 440.0048
LYS 450.0038
PRO 460.0051
TRP 470.0054
ILE 480.0048
HIS 490.0072
ALA 500.0092
THR 510.0073
SER 520.0090
ASN 530.0077
LEU 540.0058
ALA 550.0074
SER 560.0139
GLY 570.0104
VAL 580.0068
PRO 590.0073
ALA 600.0073
ARG 610.0073
PHE 620.0039
SER 630.0031
GLY 640.0059
SER 650.0117
GLY 660.0172
SER 670.0216
GLY 680.0201
THR 690.0188
SER 700.0199
TYR 710.0104
SER 720.0086
LEU 730.0048
THR 740.0047
ILE 750.0060
SER 760.0080
ARG 770.0109
VAL 780.0066
GLU 790.0054
ALA 800.0010
GLU 810.0028
ASP 820.0035
ALA 830.0020
ALA 840.0032
THR 850.0044
TYR 860.0048
TYR 870.0045
CYS 880.0044
GLN 890.0057
GLN 900.0065
TRP 910.0082
SER 920.0094
SER 930.0110
HIS 940.0121
PRO 950.0120
PRO 960.0102
THR 970.0091
PHE 980.0071
GLY 990.0063
SER 1000.0071
GLY 1010.0074
THR 1020.0060
LYS 1030.0051
LEU 1040.0033
GLU 1050.0032
ILE 1060.0049
LYS 1070.0117
ARG 1080.0141
ALA 1090.0191
ASP 1100.0132
ALA 1110.0113
ALA 1120.0091
PRO 1130.0102
THR 1140.0105
VAL 1150.0122
SER 1160.0103
ILE 1170.0095
PHE 1180.0075
PRO 1190.0047
PRO 1200.0044
SER 1210.0085
SER 1220.0121
GLU 1230.0120
GLN 1240.0114
LEU 1250.0133
THR 1260.0189
SER 1270.0184
GLY 1280.0187
GLY 1290.0136
ALA 1300.0087
SER 1310.0034
VAL 1320.0026
VAL 1330.0056
CYS 1340.0084
PHE 1350.0075
LEU 1360.0093
ASN 1370.0096
ASN 1380.0103
PHE 1390.0102
TYR 1400.0122
PRO 1410.0122
LYS 1420.0115
ASP 1430.0111
ILE 1440.0104
ASN 1450.0125
VAL 1460.0158
LYS 1470.0186
TRP 1480.0167
LYS 1490.0191
ILE 1500.0110
ASP 1510.0160
GLY 1520.0246
SER 1530.0311
GLU 1540.0260
ARG 1550.0263
GLN 1560.0218
ASN 1570.0281
GLY 1580.0098
VAL 1590.0070
LEU 1600.0054
ASN 1610.0072
SER 1620.0060
TRP 1630.0064
THR 1640.0051
ASP 1650.0051
GLN 1660.0053
ASP 1670.0065
SER 1680.0078
LYS 1690.0163
ASP 1700.0154
SER 1710.0115
THR 1720.0116
TYR 1730.0088
SER 1740.0083
MET 1750.0084
SER 1760.0068
SER 1770.0078
THR 1780.0056
LEU 1790.0067
THR 1800.0059
LEU 1810.0046
THR 1820.0153
LYS 1830.0156
ASP 1840.0192
GLU 1850.0146
TYR 1860.0087
GLU 1870.0112
ARG 1880.0148
HIS 1890.0110
ASN 1900.0109
SER 1910.0103
TYR 1920.0088
THR 1930.0132
CYS 1940.0155
GLU 1950.0163
ALA 1960.0152
THR 1970.0078
HIS 1980.0061
LYS 1990.0108
THR 2000.0120
SER 2010.0338
THR 2020.0586
SER 2030.0214
PRO 2040.0138
ILE 2050.0220
VAL 2060.0162
LYS 2070.0146
SER 2080.0139
PHE 2090.0145
ASN 2100.0131
ARG 2110.0084
ASN 2120.0232
GLU 2130.0307
CYS 2140.0366

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.